Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN24G1375 Fragaria x ananassa HOM05D008077 ORTHO05D010221 2.0e-116 422.5 228 100.0
FvH4_2g32450 Fragaria vesca HOM05D008077 ORTHO05D010221 1.1e-114 416.8 228 98.7
FAN20G1346 Fragaria x ananassa HOM05D008077 ORTHO05D010221 1.1e-111 406.8 228 96.5
FAN27G3028 Fragaria x ananassa HOM05D008077 ORTHO05D010221 2.7e-105 385.6 228 87.3
FAN15G0649 Fragaria x ananassa HOM05D008077 ORTHO05D010221 8.7e-104 380.6 225 92.4
RcHm_v2.0_Chr6g0310221 Rosa chinensis HOM05D008077 ORTHO05D010221 5.4e-98 361.3 226 81.0
Prupe.1G417600 Prunus persica HOM05D008077 ORTHO05D010221 2.1e-73 279.6 229 62.9
MD08G1076300 Malus domestica HOM05D008077 ORTHO05D010221 5.9e-60 235.0 224 58.9
QL09p016211 Quercus lobata HOM05D008077 ORTHO05D010221 7.0e-45 184.9 210 45.7
TWI56G0834 Tripterygium wilfordii HOM05D008077 ORTHO05D010221 7.0e-45 184.9 228 44.7
Dinv39194 Davidia involucrata HOM05D008077 ORTHO05D010221 9.1e-45 184.5 228 46.5
CSS0006446 Camellia sinensis var. sinensis HOM05D008077 ORTHO05D010221 2.7e-44 183.0 179 51.4
Atru.chr13.887 Acer truncatum HOM05D008077 ORTHO05D010221 1.0e-43 181.0 221 44.8
CSS0048473 Camellia sinensis var. sinensis HOM05D008077 ORTHO05D010221 1.7e-43 180.3 166 54.2
TAR376G0563 Trochodendron aralioides HOM05D008077 ORTHO05D010221 1.7e-43 180.3 182 50.0
CANSAT25G0587 Cannabis sativa HOM05D008077 ORTHO05D010221 3.8e-43 179.1 224 47.3
Haze_22366 Corylus avellana HOM05D008077 ORTHO05D010221 8.5e-43 177.9 212 46.2
Cfa013722 Carpinus fangiana HOM05D008077 ORTHO05D010221 1.9e-42 176.8 212 45.8
CiPaw.08G053400 Carya illinoinensis HOM05D008077 ORTHO05D010221 4.2e-42 175.6 163 53.4
GSVIVG01009281001 Vitis vinifera HOM05D008077 ORTHO05D010221 4.2e-42 175.6 170 49.4
Hma1.2p1_4204F.1_g338450 Hydrangea macrophylla HOM05D008077 ORTHO05D010221 5.5e-42 175.3 218 46.3
Manes.18G051200 Manihot esculenta HOM05D008077 ORTHO05D010221 5.5e-42 175.3 210 46.7
Thecc.08G082700 Theobroma cacao HOM05D008077 ORTHO05D010221 4.7e-41 172.2 173 49.1
Dinv44921 Davidia involucrata HOM05D008077 ORTHO05D010221 6.8e-40 168.3 218 43.6
ClCG05G017630 Citrullus lanatus HOM05D008077 ORTHO05D010221 1.2e-39 167.5 213 46.5
Actinidia19284 Actinidia chinensis HOM05D008077 ORTHO05D010221 1.5e-39 167.2 210 44.8
Glyma.17G232225 Glycine max HOM05D008077 ORTHO05D010221 2.8e-38 162.9 178 47.2
arahy.Tifrunner.gnm1.ann1.JS0EE0 Arachis hypogaea HOM05D008077 ORTHO05D010221 3.7e-38 162.5 229 42.4
CsaV3_4G035360 Cucumis sativus L. HOM05D008077 ORTHO05D010221 4.9e-38 162.2 213 46.0
Eucgr.F02208 Eucalyptus grandis HOM05D008077 ORTHO05D010221 6.3e-38 161.8 181 47.5
Duzib116G0694 Durio zibethinus HOM05D008077 ORTHO05D010221 1.8e-37 160.2 189 46.6
Potri.005G149500 Populus trichocarpa HOM05D008077 ORTHO05D010221 3.1e-37 159.5 209 43.1
Sabra05G0118800 Salix brachista HOM05D008077 ORTHO05D010221 7.0e-37 158.3 170 47.1
Lalb_Chr14g0367971 Lupinus albus HOM05D008077 ORTHO05D010221 9.1e-37 157.9 207 40.6
arahy.Tifrunner.gnm1.ann1.PWM57A Arachis hypogaea HOM05D008077 ORTHO05D010221 2.0e-36 156.8 213 43.2
Sc02g0008240 Simmondsia chinensis HOM05D008077 ORTHO05D010221 3.5e-36 156.0 179 43.0
Actinidia10235 Actinidia chinensis HOM05D008077 ORTHO05D010221 1.3e-35 154.1 227 38.8
Phvul.001G032000 Phaseolus vulgaris HOM05D008077 ORTHO05D010221 3.8e-35 152.5 213 41.8
Ciclev10002390m.g Citrus clementina HOM05D008077 ORTHO05D010221 6.6e-35 151.8 159 47.8
Glyma.14G090800 Glycine max HOM05D008077 ORTHO05D010221 2.5e-34 149.8 208 41.8
PSO541G6554 Papaver somniferum HOM05D008077 ORTHO05D010221 2.5e-34 149.8 193 43.5
Nn6g34549 Nelumbo nucifera HOM05D008077 ORTHO05D010221 4.2e-34 149.1 171 45.6
AUR62039341 Chenopodium quinoa HOM05D008077 ORTHO05D010221 5.5e-34 148.7 169 44.4
EL10Ac1g02339 Beta vulgaris HOM05D008077 ORTHO05D010221 1.6e-33 147.1 158 44.9
Oeu048561.1 Olea europaea HOM05D008077 ORTHO05D010221 2.1e-33 146.7 144 49.3
VMungo0647G0255 Vigna mungo HOM05D008077 ORTHO05D010221 3.6e-33 146.0 213 40.8
AUR62034975 Chenopodium quinoa HOM05D008077 ORTHO05D010221 1.0e-32 144.4 169 43.2
Ca_06992_v3 Cicer arietinum L. HOM05D008077 ORTHO05D010221 8.9e-32 141.4 214 39.3
Medtr1g017160 Medicago truncatula HOM05D008077 ORTHO05D010221 5.7e-31 138.7 219 37.4
TPR.G13063 Trifolium pratense HOM05D008077 ORTHO05D010221 5.7e-31 138.7 214 39.3
Hund05263 Selenicereus undatus HOM05D008077 ORTHO05D010221 3.7e-30 136.0 213 34.7
MBI16_g09811_MAGBIO Magnolia biondii HOM05D008077 ORTHO05D010221 4.9e-30 135.6 135 48.9
MSTRG.22201 Avicennia marina HOM05D008077 ORTHO05D010221 6.3e-30 135.2 225 36.9
Cc10_g07800 Coffea canephora HOM05D008077 ORTHO05D010221 1.1e-29 134.4 163 42.9
Gohir.D01G112200 Gossypium hirsutum HOM05D008077 ORTHO05D010221 2.4e-29 133.3 167 44.3
PSO675G3170 Papaver somniferum HOM05D008077 ORTHO05D010221 2.4e-29 133.3 186 40.3
Psat6g018560 Pisum sativum HOM05D008077 ORTHO05D010221 2.4e-29 133.3 145 45.5
Gohir.A01G124500 Gossypium hirsutum HOM05D008077 ORTHO05D010221 9.2e-29 131.3 169 44.4
Gorai.002G137100 Gossypium raimondii HOM05D008077 ORTHO05D010221 1.2e-28 131.0 167 43.7
THA.LOC104806984 Tarenaya hassleriana HOM05D008077 ORTHO05D010221 3.5e-28 129.4 185 36.2
PGR031G0263 Punica granatum HOM05D008077 ORTHO05D010221 2.3e-27 126.7 177 38.4
CDE06G2465 Ceratophyllum demersum HOM05D008077 ORTHO05D010221 9.5e-26 121.3 166 40.4
Sed0028055 Sechium edule HOM05D008077 ORTHO05D010221 9.5e-26 121.3 122 49.2
Lj5g0022198 Lotus japonicus HOM05D008077 ORTHO05D010221 3.7e-22 109.4 148 38.5
COL.COLO4_28429 Corchorus olitorius HOM05D008077 ORTHO05D010221 1.4e-21 107.5 123 46.3
MELO3C016846.2 Cucumis melo HOM05D008077 ORTHO05D010221 7.8e-20 101.7 162 41.4
MD15G1063400 Malus domestica HOM05D008077 ORTHO05D010221 1.0e-19 101.3 97 56.7
Migut.N02805 Erythranthe guttata HOM05D008077 ORTHO05D010221 2.5e-18 96.7 162 35.2
unitig_578.g16165 Utricularia gibba HOM05D008077 ORTHO05D010221 1.6e-17 94.0 88 50.0
HPP92_006033 Vanilla planifolia HOM05D008077 ORTHO05D010221 4.7e-17 92.4 112 34.8
TPR.G13160 Trifolium pratense HOM05D008077 ORTHO05D010221 4.0e-16 89.4 185 35.1
SGA_v2.0_scaffold152G36867 Striga asiatica HOM05D008077 ORTHO05D010221 5.2e-16 89.0 115 42.6
SEGI_41084 Sequoiadendron giganteum HOM05D007054 ORTHO05D008888 2.1e-12 77.0 163 30.7
Ciclev10029145m.g Citrus clementina HOM05D007054 ORTHO05D008888 3.9e-11 72.8 167 26.9
SEGI_26902 Sequoiadendron giganteum HOM05D007054 ORTHO05D008888 4.3e-10 69.3 148 29.7
Atru.chr5.2831 Acer truncatum HOM05D007054 ORTHO05D008888 7.3e-10 68.6 162 27.8
MD00G1050600 Malus domestica HOM05D007054 ORTHO05D008888 4.0e-08 62.8 154 26.0
Pp3c23_6910 Physcomitrium patens HOM05D007054 ORTHO05D008888 1.2e-07 61.2 161 25.5
CARHR039530 Cardamine hirsuta HOM05D007054 ORTHO05D008888 2.0e-07 60.5 128 28.1


User provided reference genes

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