Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN24G1311 Fragaria x ananassa HOM05D003811 ORTHO05D004470 5.6e-69 264.2 142 100.0
FvH4_2g01490 Fragaria vesca HOM05D003811 ORTHO05D004470 3.8e-65 251.5 142 95.8
FAN05G4809 Fragaria x ananassa HOM05D003811 ORTHO05D004470 3.8e-57 224.9 143 87.4
FvH4_6g24780 Fragaria vesca HOM05D003811 ORTHO05D004470 2.1e-55 219.2 139 87.8
FAN02G0923 Fragaria x ananassa HOM05D003811 ORTHO05D004470 6.1e-55 217.6 139 86.3
FAN22G1182 Fragaria x ananassa HOM05D003811 ORTHO05D004470 1.9e-53 212.6 143 80.4
FAN17G0360 Fragaria x ananassa HOM05D003811 ORTHO05D004470 1.1e-51 206.8 143 81.1
FAN12G0553 Fragaria x ananassa HOM05D003811 ORTHO05D004470 1.4e-51 206.5 143 83.2
FvH4_4g07270 Fragaria vesca HOM05D003811 ORTHO05D004470 2.6e-50 202.2 143 82.5
FAN07G1538 Fragaria x ananassa HOM05D003811 ORTHO05D004470 2.2e-49 199.1 141 81.6
RcHm_v2.0_Chr4g0399481 Rosa chinensis HOM05D003811 ORTHO05D004470 2.6e-45 185.7 142 78.2
CSS0000053 Camellia sinensis var. sinensis HOM05D003811 ORTHO05D004470 2.5e-24 115.9 102 55.9
MD13G1239300 Malus domestica HOM05D003811 ORTHO05D004470 2.7e-23 112.5 144 51.4
Actinidia38496 Actinidia chinensis HOM05D003811 ORTHO05D004470 2.0e-21 106.3 100 58.0
DCAR_014667 Daucus carota HOM05D003811 ORTHO05D004470 4.4e-21 105.1 120 50.0
TAR620G0001 Trochodendron aralioides HOM05D003811 ORTHO05D004470 1.3e-20 103.6 100 58.0
Lsat_1_v5_gn_7_56240 Lactuca sativa HOM05D003811 ORTHO05D004470 1.1e-19 100.5 107 56.1
Dinv25445 Davidia involucrata HOM05D003811 ORTHO05D004470 3.1e-19 99.0 111 53.2
Hma1.2p1_1326F.1_g275850 Hydrangea macrophylla HOM05D003811 ORTHO05D004470 3.1e-19 99.0 102 54.9
vmacro05996 Vaccinium macrocarpon HOM05D003811 ORTHO05D004470 5.4e-19 98.2 113 48.7
Oeu018819.1 Olea europaea HOM05D003811 ORTHO05D004470 7.0e-19 97.8 109 56.0
Rhsim03G0266200 Rhododendron simsii HOM05D003811 ORTHO05D004470 3.5e-18 95.5 103 52.4
Cpa.g.sc95.8 Carica papaya HOM05D003811 ORTHO05D004470 5.9e-18 94.7 107 53.3
Cfa013454 Carpinus fangiana HOM05D003811 ORTHO05D004470 5.9e-18 94.7 143 46.9
DCAR_018030 Daucus carota HOM05D003811 ORTHO05D004470 1.0e-17 94.0 136 45.6
GSVIVG01010855001 Vitis vinifera HOM05D003811 ORTHO05D004470 1.3e-17 93.6 110 50.9
Peaxi162Scf01038g00011 Petunia axillaris HOM05D003811 ORTHO05D004470 5.0e-17 91.7 149 42.3
HanXRQChr03g0065501 Helianthus annuus HOM05D003811 ORTHO05D004470 1.5e-16 90.1 100 49.0
Thecc.09G186300 Theobroma cacao HOM05D003811 ORTHO05D004470 4.2e-16 88.6 103 50.5
Duzib168G0111 Durio zibethinus HOM05D003811 ORTHO05D004470 7.2e-16 87.8 106 50.9
ClCG11G011760 Citrullus lanatus HOM05D003811 ORTHO05D004470 9.5e-16 87.4 144 44.4
HanXRQChr09g0245431 Helianthus annuus HOM05D003811 ORTHO05D004470 9.5e-16 87.4 98 54.1
Oeu019552.1 Olea europaea HOM05D003811 ORTHO05D004470 9.5e-16 87.4 109 50.5
ECA240G2391 Erigeron canadensis HOM05D003811 ORTHO05D004470 1.2e-15 87.0 102 48.0
Ah.10g036890 Amaranthus hybridus HOM05D003811 ORTHO05D004470 1.6e-15 86.7 109 49.5
Sed0025374 Sechium edule HOM05D003811 ORTHO05D004470 1.6e-15 86.7 142 45.1
CiPaw.07G197300 Carya illinoinensis HOM05D003811 ORTHO05D004470 2.8e-15 85.9 144 44.4
Nitab4.5_0000491g0080 Nicotiana tabacum HOM05D003811 ORTHO05D004470 3.6e-15 85.5 151 40.4
Hund13780 Selenicereus undatus HOM05D003811 ORTHO05D004470 4.7e-15 85.1 103 48.5
Ciclev10008308m.g Citrus clementina HOM05D003811 ORTHO05D004470 1.0e-14 84.0 103 50.5
Duzib150G1212 Durio zibethinus HOM05D003811 ORTHO05D004470 1.0e-14 84.0 98 49.0
Migut.J00797 Erythranthe guttata HOM05D003811 ORTHO05D004470 1.0e-14 84.0 140 41.4
CAN.G192.5 Capsicum annuum HOM05D003811 ORTHO05D004470 1.4e-14 83.6 129 38.8
Cc06_g20840 Coffea canephora HOM05D003811 ORTHO05D004470 1.4e-14 83.6 140 42.9
Potri.006G075200 Populus trichocarpa HOM05D003811 ORTHO05D004470 1.4e-14 83.6 108 48.1
Nitab4.5_0000949g0020 Nicotiana tabacum HOM05D003811 ORTHO05D004470 2.3e-14 82.8 125 43.2
Sabra06G0055900 Salix brachista HOM05D003811 ORTHO05D004470 2.3e-14 82.8 108 47.2
MD16G1248400 Malus domestica HOM05D003811 ORTHO05D004470 4.0e-14 82.0 123 45.5
CsaV3_2G008720 Cucumis sativus L. HOM05D003811 ORTHO05D004470 5.2e-14 81.6 114 43.0
HanXRQChr10g0308851 Helianthus annuus HOM05D003811 ORTHO05D004470 5.2e-14 81.6 122 45.1
MELO3C003975.2 Cucumis melo HOM05D003811 ORTHO05D004470 6.8e-14 81.3 114 43.0
Potri.018G142100 Populus trichocarpa HOM05D003811 ORTHO05D004470 6.8e-14 81.3 115 47.0
Sabra18G0116100 Salix brachista HOM05D003811 ORTHO05D004470 6.8e-14 81.3 115 46.1
Aqoxy7G02811 Aquilegia oxysepala HOM05D003811 ORTHO05D004470 8.9e-14 80.9 103 44.7
Oeu006847.1 Olea europaea HOM05D003811 ORTHO05D004470 1.2e-13 80.5 101 47.5
TWI63G0214 Tripterygium wilfordii HOM05D003811 ORTHO05D004470 1.5e-13 80.1 101 48.5
arahy.Tifrunner.gnm1.ann1.YRC4PH Arachis hypogaea HOM05D003811 ORTHO05D004470 2.6e-13 79.3 109 46.8
arahy.Tifrunner.gnm1.ann1.0QJD35 Arachis hypogaea HOM05D003811 ORTHO05D004470 9.8e-13 77.4 104 47.1
MSTRG.26548 Avicennia marina HOM05D003811 ORTHO05D004470 9.8e-13 77.4 97 45.4
Nitab4.5_0000949g0010 Nicotiana tabacum HOM05D003811 ORTHO05D004470 9.8e-13 77.4 152 40.1
Lj5C615T3 Lonicera japonica HOM05D003811 ORTHO05D004470 1.3e-12 77.0 102 46.1
EL10Ac2g04726 Beta vulgaris HOM05D003811 ORTHO05D004470 2.8e-12 75.9 121 43.0
Lj5C612T1 Lonicera japonica HOM05D003811 ORTHO05D004470 2.8e-12 75.9 102 46.1
Manes.06G019300 Manihot esculenta HOM05D003811 ORTHO05D004470 2.8e-12 75.9 111 44.1
VMungo1215G0314 Vigna mungo HOM05D003811 ORTHO05D004470 2.8e-12 75.9 144 39.6
Atru.chr7.754 Acer truncatum HOM05D003811 ORTHO05D004470 3.7e-12 75.5 100 48.0
Atru.chr7.775 Acer truncatum HOM05D003811 ORTHO05D004470 3.7e-12 75.5 100 48.0
Prupe.1G074900 Prunus persica HOM05D003811 ORTHO05D004470 3.7e-12 75.5 159 43.4
Solyc07g008540.3 Solanum lycopersicum HOM05D003811 ORTHO05D004470 8.3e-12 74.3 120 41.7
Ah.16g102470 Amaranthus hybridus HOM05D003811 ORTHO05D008019 1.1e-11 73.9 121 43.0
Migut.L01879 Erythranthe guttata HOM05D003811 ORTHO05D004470 1.1e-11 73.9 99 47.5
ECA234G4485 Erigeron canadensis HOM05D003811 ORTHO05D004470 1.4e-11 73.6 102 48.0
Aa31LG3G13080 Aethionema arabicum HOM05D003811 ORTHO05D004470 1.8e-11 73.2 112 41.1
Oeu034800.1 Olea europaea HOM05D003811 ORTHO05D004470 1.8e-11 73.2 110 41.8
Hund16072 Selenicereus undatus HOM05D003811 ORTHO05D004470 1.8e-11 73.2 105 44.8
Lalb_Chr07g0180651 Lupinus albus HOM05D003811 ORTHO05D004470 3.1e-11 72.4 106 43.4
Sopen07g004460 Solanum pennellii HOM05D003811 ORTHO05D004470 3.1e-11 72.4 120 40.8
Glyma.17G059100 Glycine max HOM05D003811 ORTHO05D004470 5.4e-11 71.6 108 44.4
Sed0004951 Sechium edule HOM05D003811 ORTHO05D004470 5.4e-11 71.6 109 42.2
Manes.14G159300 Manihot esculenta HOM05D003811 ORTHO05D004470 7.0e-11 71.2 109 43.1
TPR.G32975 Trifolium pratense HOM05D003811 ORTHO05D004470 9.2e-11 70.9 97 45.4
Psat4g013600 Pisum sativum HOM05D003811 ORTHO05D004470 1.2e-10 70.5 97 42.3
Rhsim01G0116800 Rhododendron simsii HOM05D003811 ORTHO05D004470 1.6e-10 70.1 97 39.2
Actinidia29953 Actinidia chinensis HOM05D003811 ORTHO05D004470 2.0e-10 69.7 68 51.5
COL.COLO4_07099 Corchorus olitorius HOM05D003811 ORTHO05D004470 2.0e-10 69.7 138 33.3
QL02p046940 Quercus lobata HOM05D003811 ORTHO05D004470 2.7e-10 69.3 104 41.3
PGSC0003DMG400022983 Solanum tuberosum HOM05D003811 ORTHO05D004470 2.7e-10 69.3 129 38.8
Ca_27932_v3 Cicer arietinum L. HOM05D003811 ORTHO05D004470 3.5e-10 68.9 104 40.4
Lsat_1_v5_gn_5_27801 Lactuca sativa HOM05D003811 ORTHO05D036460 3.5e-10 68.9 78 44.9
Glyma.13G100700 Glycine max HOM05D003811 ORTHO05D004470 4.5e-10 68.6 142 40.1
Medtr4g127420 Medicago truncatula HOM05D003811 ORTHO05D004470 4.5e-10 68.6 97 44.3
Phvul.003G141200 Phaseolus vulgaris HOM05D003811 ORTHO05D004470 4.5e-10 68.6 143 39.9
Eucgr.C02219 Eucalyptus grandis HOM05D003811 ORTHO05D004470 5.9e-10 68.2 99 43.4
vmacro20813 Vaccinium macrocarpon HOM05D003832 ORTHO05D004365 2.3e-09 66.2 100 40.0
CDE06G2566 Ceratophyllum demersum HOM05D003811 ORTHO05D004470 2.9e-09 65.9 100 41.0
MBI16_g05834_MAGBIO Magnolia biondii HOM05D003811 ORTHO05D004470 2.9e-09 65.9 98 40.8
HanXRQChr05g0141071 Helianthus annuus HOM05D003811 ORTHO05D004470 3.8e-09 65.5 112 39.3
Lsat_1_v5_gn_8_69001 Lactuca sativa HOM05D003811 ORTHO05D004470 3.8e-09 65.5 96 41.7
unitig_22.g5159 Utricularia gibba HOM05D003811 ORTHO05D004470 3.8e-09 65.5 108 38.9
unitig_8.g4051 Utricularia gibba HOM05D003811 ORTHO05D004470 3.8e-09 65.5 108 38.0
CiPaw.08G032400 Carya illinoinensis HOM05D003811 ORTHO05D004470 8.6e-09 64.3 122 40.2
Sc10g0001710 Simmondsia chinensis HOM05D003811 ORTHO05D004470 8.6e-09 64.3 106 43.4
MBI13_g34046_MAGBIO Magnolia biondii HOM05D003811 ORTHO05D004470 1.1e-08 63.9 98 45.9
Lsat_1_v5_gn_5_45681 Lactuca sativa HOM05D003811 ORTHO05D036460 1.5e-08 63.5 69 46.4
MSTRG.10438 Avicennia marina HOM05D003811 ORTHO05D004470 1.9e-08 63.2 97 43.3
Eucgr.C00112 Eucalyptus grandis HOM05D003811 ORTHO05D004470 1.9e-08 63.2 102 42.2
Lj4g0014027 Lotus japonicus HOM05D003811 ORTHO05D004470 5.6e-08 61.6 98 40.8
Lalb_Chr12g0199621 Lupinus albus HOM05D003811 ORTHO05D004470 9.5e-08 60.8 129 38.0
Lalb_Chr13g0299991 Lupinus albus HOM05D003811 ORTHO05D004470 9.5e-08 60.8 104 43.3
Nn8g40778 Nelumbo nucifera HOM05D003811 ORTHO05D004470 1.2e-07 60.5 103 41.7
SGA_v2.0_scaffold511G52626 Striga asiatica HOM05D003811 ORTHO05D004470 1.6e-07 60.1 105 39.0
ECA236G3708 Erigeron canadensis HOM05D003811 ORTHO05D004470 2.1e-07 59.7 136 33.1
Thhalv10013517m.g Eutrema salsugineum HOM05D003811 ORTHO05D004470 2.8e-07 59.3 104 40.4
Lsat_1_v5_gn_5_83141 Lactuca sativa HOM05D003811 ORTHO05D004470 2.8e-07 59.3 131 33.6
CARHR233500 Cardamine hirsuta HOM05D003811 ORTHO05D004470 6.1e-07 58.2 99 39.4
TPR.G7568 Trifolium pratense HOM05D002228 ORTHO05D002347 6.1e-07 58.2 109 39.4
Lsat_1_v5_gn_9_75161 Lactuca sativa HOM05D003811 ORTHO05D036460 3.0e-06 55.8 69 43.5
Sp7g24010 Schrenkiella parvula HOM05D003811 ORTHO05D004470 4.0e-06 55.5 100 39.0
HPP92_017127 Vanilla planifolia HOM05D003811 ORTHO05D004470 8.9e-06 54.3 112 34.8


User provided reference genes

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