Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN24G1027 Fragaria x ananassa HOM05D006737 ORTHO05D008418 7.4e-186 653.7 318 100.0
FvH4_2g25800 Fragaria vesca HOM05D006737 ORTHO05D008418 2.2e-185 652.1 318 99.7
FAN15G3576 Fragaria x ananassa HOM05D006737 ORTHO05D008418 2.0e-183 645.6 318 98.7
FAN27G1696 Fragaria x ananassa HOM05D006737 ORTHO05D008418 8.8e-179 630.2 331 94.0
FAN20G1602 Fragaria x ananassa HOM05D006737 ORTHO05D008418 1.0e-171 606.7 313 95.2
RcHm_v2.0_Chr6g0294111 Rosa chinensis HOM05D006737 ORTHO05D008418 9.7e-170 600.1 320 91.9
Prupe.8G262100 Prunus persica HOM05D006737 ORTHO05D008418 2.9e-150 535.4 319 82.1
MD03G1288800 Malus domestica HOM05D006737 ORTHO05D008418 1.4e-147 526.6 320 79.1
MD11G1309100 Malus domestica HOM05D006737 ORTHO05D008418 1.7e-145 519.6 319 79.9
Cfa005906 Carpinus fangiana HOM05D006737 ORTHO05D008418 1.2e-140 503.4 320 77.2
Haze_04944 Corylus avellana HOM05D006737 ORTHO05D008418 1.6e-140 503.1 318 77.4
Atru.chr5.1140 Acer truncatum HOM05D006737 ORTHO05D008418 6.6e-134 481.1 319 72.1
Ciclev10021225m.g Citrus clementina HOM05D006737 ORTHO05D008418 8.6e-134 480.7 318 72.6
Potri.002G203900 Populus trichocarpa HOM05D006737 ORTHO05D008418 1.9e-133 479.6 319 74.6
Manes.01G219800 Manihot esculenta HOM05D006737 ORTHO05D008418 6.2e-132 474.6 315 73.3
CiPaw.07G109800 Carya illinoinensis HOM05D006737 ORTHO05D008418 3.1e-131 472.2 355 66.2
TWI14G0449 Tripterygium wilfordii HOM05D006737 ORTHO05D008418 2.9e-129 465.7 318 71.1
Sabra02G0155300 Salix brachista HOM05D006737 ORTHO05D008418 3.0e-126 455.7 361 64.3
QL12p028401 Quercus lobata HOM05D006737 ORTHO05D008418 8.3e-121 437.6 317 66.9
CSS0030900 Camellia sinensis var. sinensis HOM05D006737 ORTHO05D008418 1.9e-120 436.4 317 69.7
Cpa.g.sc9.256 Carica papaya HOM05D006737 ORTHO05D008418 1.2e-119 433.7 294 69.4
Thecc.01G301300 Theobroma cacao HOM05D006737 ORTHO05D008418 1.6e-119 433.3 355 63.1
GSVIVG01028025001 Vitis vinifera HOM05D006737 ORTHO05D008418 2.1e-119 433.0 315 66.7
CiPaw.07G109600 Carya illinoinensis HOM05D006737 ORTHO05D008418 4.6e-119 431.8 255 78.4
Gorai.008G144900 Gossypium raimondii HOM05D006737 ORTHO05D008418 4.3e-117 425.2 325 65.2
CANSAT25G2451 Cannabis sativa HOM05D006737 ORTHO05D008418 1.6e-116 423.3 319 65.2
Gohir.D12G133900 Gossypium hirsutum HOM05D006737 ORTHO05D008418 2.8e-116 422.5 325 64.9
vmacro02447 Vaccinium macrocarpon HOM05D006737 ORTHO05D008418 3.6e-116 422.2 313 68.4
Gohir.A12G130100 Gossypium hirsutum HOM05D006737 ORTHO05D008418 1.4e-115 420.2 309 66.0
Nn3g21504 Nelumbo nucifera HOM05D006737 ORTHO05D008418 2.0e-114 416.4 316 64.6
TAR365G0544 Trochodendron aralioides HOM05D006737 ORTHO05D008418 5.8e-114 414.8 325 65.2
Gohir.D08G085900 Gossypium hirsutum HOM05D006737 ORTHO05D008418 1.3e-113 413.7 288 69.4
Gorai.004G090400 Gossypium raimondii HOM05D006737 ORTHO05D008418 2.2e-113 412.9 288 69.4
Gohir.A08G076400 Gossypium hirsutum HOM05D006737 ORTHO05D008418 2.9e-113 412.5 288 69.1
Eucgr.H01107 Eucalyptus grandis HOM05D006737 ORTHO05D008418 9.2e-112 407.5 288 67.7
Lj6g0001904 Lotus japonicus HOM05D006737 ORTHO05D008418 2.5e-109 399.4 282 67.0
PGR119G0152 Punica granatum HOM05D006737 ORTHO05D008418 1.2e-106 390.6 318 60.1
Rhsim13G0009900 Rhododendron simsii HOM05D006737 ORTHO05D008418 3.4e-106 389.0 327 62.1
Aqoxy2G02933 Aquilegia oxysepala HOM05D006737 ORTHO05D008418 6.4e-105 384.8 294 65.0
Glyma.19G211400 Glycine max HOM05D006737 ORTHO05D008418 6.4e-105 384.8 283 65.0
MBI19_g26092_MAGBIO Magnolia biondii HOM05D006737 ORTHO05D008418 2.7e-103 379.4 292 61.3
MSTRG.12607 Avicennia marina HOM05D006737 ORTHO05D008418 6.0e-103 378.3 324 58.0
Hma1.2p1_0491F.1_g164620 Hydrangea macrophylla HOM05D006737 ORTHO05D008418 7.8e-103 377.9 298 64.1
Duzib138G1512 Durio zibethinus HOM05D006737 ORTHO05D008418 1.7e-102 376.7 267 69.7
ClCG01G014930 Citrullus lanatus HOM05D006737 ORTHO05D008418 1.1e-101 374.0 311 60.5
Lsat_1_v5_gn_8_164261 Lactuca sativa HOM05D006737 ORTHO05D008418 5.6e-101 371.7 321 58.3
Phvul.001G207600 Phaseolus vulgaris HOM05D006737 ORTHO05D008418 9.6e-101 370.9 283 62.9
EL10Ac7g17513 Beta vulgaris HOM05D006737 ORTHO05D008418 3.1e-99 365.9 283 60.8
Actinidia01489 Actinidia chinensis HOM05D006737 ORTHO05D008418 4.0e-99 365.5 237 72.6
CsaV3_6G041030 Cucumis sativus L. HOM05D006737 ORTHO05D008418 6.9e-99 364.8 311 58.5
Hund05430 Selenicereus undatus HOM05D006737 ORTHO05D008418 1.5e-98 363.6 320 55.6
AL6G50710 Arabidopsis lyrata HOM05D006737 ORTHO05D008418 4.5e-98 362.1 311 59.2
Thhalv10028823m.g Eutrema salsugineum HOM05D006737 ORTHO05D008418 4.5e-98 362.1 311 57.6
PSO170G1161 Papaver somniferum HOM05D006737 ORTHO05D008418 4.5e-98 362.1 293 60.1
MELO3C024580.2 Cucumis melo HOM05D006737 ORTHO05D008418 7.6e-98 361.3 311 58.2
PSO407G0435 Papaver somniferum HOM05D006737 ORTHO05D008418 4.9e-97 358.6 299 58.9
ECA236G1530 Erigeron canadensis HOM05D006737 ORTHO05D008418 6.4e-97 358.2 288 60.4
Sopen06g035940 Solanum pennellii HOM05D006737 ORTHO05D008418 6.4e-97 358.2 285 60.7
Sc05g0003760 Simmondsia chinensis HOM05D006737 ORTHO05D008418 1.9e-96 356.7 284 60.6
arahy.Tifrunner.gnm1.ann1.AY1VU4 Arachis hypogaea HOM05D006737 ORTHO05D008418 2.4e-96 356.3 294 60.5
BcaC01g06761 Brassica carinata HOM05D006737 ORTHO05D008418 3.2e-96 355.9 312 56.7
BcaB01g02446 Brassica carinata HOM05D006737 ORTHO05D008418 4.2e-96 355.5 310 57.1
AUR62008669 Chenopodium quinoa HOM05D006737 ORTHO05D008418 5.4e-96 355.1 276 61.2
Solyc06g084570.4 Solanum lycopersicum HOM05D006737 ORTHO05D008418 2.7e-95 352.8 289 59.5
Carub.0006s3475 Capsella rubella HOM05D006737 ORTHO05D008418 4.6e-95 352.1 311 57.6
CAN.G1209.24 Capsicum annuum HOM05D006737 ORTHO05D008418 6.0e-95 351.7 306 56.9
VMungo1383G2597 Vigna mungo HOM05D006737 ORTHO05D008418 1.0e-94 350.9 257 65.0
CARHR250600 Cardamine hirsuta HOM05D006737 ORTHO05D008418 1.3e-94 350.5 310 56.8
C03p37890 Brassica napus HOM05D006737 ORTHO05D008418 1.8e-94 350.1 323 54.8
BolC3t16077H Brassica oleracea HOM05D006737 ORTHO05D008418 6.7e-94 348.2 322 54.7
Sp6g02290 Schrenkiella parvula HOM05D006737 ORTHO05D008418 6.7e-94 348.2 313 57.2
Nitab4.5_0004367g0110 Nicotiana tabacum HOM05D006737 ORTHO05D008418 1.5e-93 347.1 364 50.5
SalBow2G2271 Salvia bowleyana HOM05D006737 ORTHO05D008418 1.5e-93 347.1 255 61.2
Aa31LG5G2050 Aethionema arabicum HOM05D006737 ORTHO05D008418 1.9e-93 346.7 312 56.1
AUR62025575 Chenopodium quinoa HOM05D006737 ORTHO05D008418 7.4e-93 344.7 283 58.7
Lalb_Chr02g0146391 Lupinus albus HOM05D006737 ORTHO05D008418 9.6e-93 344.4 302 56.3
A03p31080 Brassica napus HOM05D006737 ORTHO05D008418 1.1e-91 340.9 321 54.2
BraA03t12285Z Brassica rapa HOM05D006737 ORTHO05D008418 1.1e-91 340.9 321 54.2
MBI19_g25361_MAGBIO Magnolia biondii HOM05D006737 ORTHO05D008418 5.3e-91 338.6 332 51.8
Oeu048335.1 Olea europaea HOM05D006737 ORTHO05D008418 2.0e-90 336.7 235 67.2
DCAR_002840 Daucus carota HOM05D006737 ORTHO05D008418 4.5e-90 335.5 321 54.2
Peaxi162Scf00140g01213 Petunia axillaris HOM05D006737 ORTHO05D008418 4.5e-90 335.5 259 62.5
COL.COLO4_23338 Corchorus olitorius HOM05D006737 ORTHO05D008418 2.2e-89 333.2 210 73.8
arahy.Tifrunner.gnm1.ann1.B4PCIP Arachis hypogaea HOM05D006737 ORTHO05D008418 1.1e-88 330.9 325 55.4
CDE01G0235 Ceratophyllum demersum HOM05D006737 ORTHO05D008418 7.1e-88 328.2 294 54.4
Cc01_g20900 Coffea canephora HOM05D006737 ORTHO05D008418 3.5e-87 325.9 311 53.1
SGA_v2.0_scaffold198G41142 Striga asiatica HOM05D006737 ORTHO05D008418 1.8e-86 323.6 301 54.2
Migut.N01508 Erythranthe guttata HOM05D006737 ORTHO05D008418 4.3e-85 318.9 271 58.3
Migut.O00484 Erythranthe guttata HOM05D006737 ORTHO05D008418 4.3e-85 318.9 271 58.3
HanXRQChr04g0114161 Helianthus annuus HOM05D006737 ORTHO05D008418 1.3e-84 317.4 256 58.6
AT4G02405 Arabidopsis thaliana HOM05D006737 ORTHO05D008418 2.0e-82 310.1 258 57.0
Migut.J01135 Erythranthe guttata HOM05D006737 ORTHO05D008418 7.6e-82 308.1 272 57.7
Os07g0247100 Oryza sativa ssp. japonica HOM05D006737 ORTHO05D008418 1.3e-73 280.8 292 46.9
Lj2A1195G25 Lonicera japonica HOM05D006737 ORTHO05D008418 1.6e-71 273.9 268 53.7
Sed0017513 Sechium edule HOM05D006737 ORTHO05D008418 1.0e-70 271.2 232 58.6
Zm00001eb097030 Zea mays HOM05D006737 ORTHO05D008418 1.4e-70 270.8 289 47.4
Dinv33057 Davidia involucrata HOM05D006737 ORTHO05D008418 2.6e-53 213.4 156 67.9
Oeu010666.1 Olea europaea HOM05D006737 ORTHO05D008418 1.4e-43 181.0 132 62.1
Pp3c24_12380 Physcomitrium patens HOM05D006737 ORTHO05D008418 9.1e-43 178.3 301 38.2
Nitab4.5_0002820g0110 Nicotiana tabacum HOM05D006737 ORTHO05D008418 3.5e-42 176.4 140 60.0
PGSC0003DMG400024036 Solanum tuberosum HOM05D006737 ORTHO05D008418 4.7e-39 166.0 125 60.8
Mapoly0132s0018 Marchantia polymorpha HOM05D006737 ORTHO05D008418 3.5e-34 149.8 236 36.4
arahy.Tifrunner.gnm1.ann1.MB1A81 Arachis hypogaea HOM05D006737 ORTHO05D008418 4.5e-34 149.4 124 56.5
VMungo1383G3174 Vigna mungo HOM05D006737 ORTHO05D008418 2.3e-30 137.1 255 35.3
arahy.Tifrunner.gnm1.ann1.MU6BTE Arachis hypogaea HOM05D006737 ORTHO05D008418 2.0e-26 124.0 116 50.0
Dinv07247 Davidia involucrata HOM05D006737 ORTHO05D008418 2.9e-25 120.2 90 62.2
Dinv31287 Davidia involucrata HOM05D006737 ORTHO05D008418 2.9e-25 120.2 90 62.2
SEGI_39136 Sequoiadendron giganteum HOM05D006737 ORTHO05D008418 6.8e-22 109.0 141 40.4
Dinv17961 Davidia involucrata HOM05D006737 ORTHO05D008418 1.5e-21 107.8 86 58.1
BcaB01g02447 Brassica carinata HOM05D006737 ORTHO05D008418 3.1e-14 83.6 64 62.5
Dinv02523 Davidia involucrata HOM05D006737 ORTHO05D008418 2.0e-13 80.9 55 67.3
BcaB01g02050 Brassica carinata HOM05D006737 ORTHO05D008418 7.5e-13 79.0 102 44.1
Dinv32677 Davidia involucrata HOM05D006737 ORTHO05D008418 1.9e-11 74.3 53 64.2
MCO02G241 Micromonas commoda HOM05D006737 ORTHO05D008418 5.6e-08 62.8 213 25.4
PGR031G2630 Punica granatum HOM05D006598 ORTHO05D008132 9.5e-08 62.0 179 28.5
Atru.chr9.1259 Acer truncatum HOM05D000593 ORTHO05D002268 1.2e-07 61.6 64 54.7
Cre01.g055469 Chlamydomonas reinhardtii HOM05D006737 ORTHO05D008418 4.7e-07 59.7 102 32.4
Atru.chr3.1390 Acer truncatum HOM05D000593 ORTHO05D000562 1.4e-06 58.2 33 87.9
Cre09.g387282 Chlamydomonas reinhardtii HOM05D006737 ORTHO05D008418 1.4e-06 58.2 94 38.3
Ah.11g043150 Amaranthus hybridus HOM05D006598 ORTHO05D008132 3.1e-06 57.0 201 25.9


User provided reference genes

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