Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN24G1019 Fragaria x ananassa HOM05D006293 ORTHO05D007971 8.4e-170 600.5 361 100.0
FAN15G0431 Fragaria x ananassa HOM05D006293 ORTHO05D007971 1.8e-167 592.8 361 91.4
FvH4_2g01740 Fragaria vesca HOM05D006293 ORTHO05D007971 2.2e-165 585.9 361 97.5
FAN20G1949 Fragaria x ananassa HOM05D006293 ORTHO05D007971 1.0e-162 577.0 362 96.4
FAN27G2989 Fragaria x ananassa HOM05D006293 ORTHO05D007971 5.0e-162 574.7 362 95.3
RcHm_v2.0_Chr6g0244771 Rosa chinensis HOM05D006293 ORTHO05D007971 4.1e-148 528.5 361 87.0
Prupe.8G161400 Prunus persica HOM05D006293 ORTHO05D007971 3.2e-129 465.7 354 76.8
QL11p047722 Quercus lobata HOM05D006293 ORTHO05D007971 1.4e-124 450.3 348 73.3
MD05G1116900 Malus domestica HOM05D006293 ORTHO05D007971 2.9e-122 442.6 355 78.9
Cfa005191 Carpinus fangiana HOM05D006293 ORTHO05D007971 2.9e-117 426.0 353 67.4
Haze_02189 Corylus avellana HOM05D006293 ORTHO05D007971 1.5e-113 413.7 353 68.3
CiPaw.05G077900 Carya illinoinensis HOM05D006293 ORTHO05D007971 7.3e-113 411.4 338 68.0
TAR376G0811 Trochodendron aralioides HOM05D006293 ORTHO05D007971 2.6e-110 402.9 363 57.6
Potri.004G169200 Populus trichocarpa HOM05D006293 ORTHO05D007971 4.4e-110 402.1 351 66.1
Rhsim11G0188600 Rhododendron simsii HOM05D006293 ORTHO05D007971 8.3e-109 397.9 356 64.6
GSVIVG01024071001 Vitis vinifera HOM05D006293 ORTHO05D007971 1.9e-108 396.7 360 63.1
Glyma.06G004900 Glycine max HOM05D006293 ORTHO05D007971 3.2e-108 396.0 354 62.4
Glyma.04G005100 Glycine max HOM05D006293 ORTHO05D007971 5.4e-108 395.2 356 65.4
Nn5g29105 Nelumbo nucifera HOM05D006293 ORTHO05D007971 5.4e-108 395.2 359 56.0
Dinv04963 Davidia involucrata HOM05D006293 ORTHO05D007971 7.0e-108 394.8 353 64.9
CANSAT25G1913 Cannabis sativa HOM05D006293 ORTHO05D007971 2.0e-107 393.3 351 68.7
VMungo1309G1166 Vigna mungo HOM05D006293 ORTHO05D007971 8.6e-106 387.9 352 61.6
Manes.11G090800 Manihot esculenta HOM05D006293 ORTHO05D007971 1.1e-105 387.5 352 63.9
Gorai.002G193700 Gossypium raimondii HOM05D006293 ORTHO05D007971 4.3e-105 385.6 352 59.9
Phvul.009G025500 Phaseolus vulgaris HOM05D006293 ORTHO05D007971 5.6e-105 385.2 356 62.4
Gohir.D01G156200 Gossypium hirsutum HOM05D006293 ORTHO05D007971 1.2e-104 384.0 352 59.7
vmacro02255 Vaccinium macrocarpon HOM05D006293 ORTHO05D007971 1.2e-104 384.0 347 64.8
TWI31G0553 Tripterygium wilfordii HOM05D006293 ORTHO05D007971 1.6e-104 383.6 348 68.7
COL.COLO4_17266 Corchorus olitorius HOM05D006293 ORTHO05D007971 3.6e-104 382.5 365 63.3
Duzib132G0283 Durio zibethinus HOM05D006293 ORTHO05D007971 4.0e-103 379.0 351 64.4
Ca_15314_v3 Cicer arietinum L. HOM05D006293 ORTHO05D007971 6.8e-103 378.3 357 59.1
Gohir.A01G164300 Gossypium hirsutum HOM05D006293 ORTHO05D007971 8.9e-103 377.9 351 59.3
Thecc.02G066200 Theobroma cacao HOM05D006293 ORTHO05D007971 8.9e-103 377.9 351 63.8
Ciclev10028711m.g Citrus clementina HOM05D006293 ORTHO05D007971 1.2e-102 377.5 353 72.8
CSS0030950 Camellia sinensis var. sinensis HOM05D006293 ORTHO05D007971 3.4e-102 375.9 360 63.3
Eucgr.G01761 Eucalyptus grandis HOM05D006293 ORTHO05D007971 7.1e-100 368.2 351 64.7
TAR536G0014 Trochodendron aralioides HOM05D006293 ORTHO05D007971 9.2e-100 367.9 368 51.1
Rhsim11G0188500 Rhododendron simsii HOM05D006293 ORTHO05D007971 2.7e-99 366.3 367 62.7
Lj1g0023631 Lotus japonicus HOM05D006293 ORTHO05D007971 1.0e-98 364.4 356 62.6
Medtr3g117760 Medicago truncatula HOM05D006293 ORTHO05D007971 2.3e-98 363.2 355 53.2
TAR628G0693 Trochodendron aralioides HOM05D006293 ORTHO05D007971 6.6e-98 361.7 367 52.9
TPR.G38570 Trifolium pratense HOM05D006293 ORTHO05D007971 3.3e-97 359.4 351 57.5
ClCG02G011620 Citrullus lanatus HOM05D006293 ORTHO05D007971 3.6e-96 355.9 360 56.9
Peaxi162Scf00362g00956 Petunia axillaris HOM05D001375 ORTHO05D001222 3.6e-96 355.9 353 56.4
Cpa.g.sc37.182 Carica papaya HOM05D006293 ORTHO05D007971 4.7e-96 355.5 350 61.4
Oeu060421.1 Olea europaea HOM05D006293 ORTHO05D007971 1.1e-95 354.4 355 61.4
Cc02_g16450 Coffea canephora HOM05D006293 ORTHO05D007971 1.2e-94 350.9 351 57.0
SGA_v2.0_scaffold32G13265 Striga asiatica HOM05D006293 ORTHO05D007971 4.4e-94 349.0 372 50.8
Nn1g05912 Nelumbo nucifera HOM05D006293 ORTHO05D007971 8.4e-93 344.7 363 54.0
Solyc01g111210.3 Solanum lycopersicum HOM05D001375 ORTHO05D001222 8.4e-93 344.7 351 50.1
PGSC0003DMG400001627 Solanum tuberosum HOM05D006293 ORTHO05D007971 1.1e-92 344.4 352 55.4
Psat5g003040 Pisum sativum HOM05D006293 ORTHO05D007971 2.4e-92 343.2 365 59.7
Oeu014457.2 Olea europaea HOM05D006293 ORTHO05D007971 9.2e-92 341.3 367 55.6
Sopen01g053260 Solanum pennellii HOM05D006293 ORTHO05D007971 9.2e-92 341.3 352 49.7
Lalb_Chr23g0265081 Lupinus albus HOM05D006293 ORTHO05D007971 2.7e-91 339.7 353 60.6
CAN.G588.32 Capsicum annuum HOM05D006293 ORTHO05D007971 4.6e-91 339.0 359 55.4
Migut.B00115 Erythranthe guttata HOM05D006293 ORTHO05D007971 1.1e-89 334.3 354 56.2
HanXRQChr17g0557851 Helianthus annuus HOM05D006293 ORTHO05D007971 1.5e-89 334.0 356 57.6
Sed0004865 Sechium edule HOM05D006293 ORTHO05D007971 1.5e-89 334.0 362 54.4
THA.LOC104804336 Tarenaya hassleriana HOM05D006293 ORTHO05D007971 3.1e-87 326.2 353 51.6
EL10Ac9g21428 Beta vulgaris HOM05D006293 ORTHO05D007971 4.0e-87 325.9 354 58.5
MSTRG.16884 Avicennia marina HOM05D006293 ORTHO05D007971 8.9e-87 324.7 373 56.0
Lj5C183T16 Lonicera japonica HOM05D006293 ORTHO05D007971 2.6e-86 323.2 353 58.6
Hund06410 Selenicereus undatus HOM05D006293 ORTHO05D007971 2.2e-85 320.1 363 53.7
Nitab4.5_0000980g0060 Nicotiana tabacum HOM05D001375 ORTHO05D001222 6.4e-85 318.5 350 53.7
Dinv41970 Davidia involucrata HOM05D006293 ORTHO05D007971 1.9e-84 317.0 307 53.1
Lsat_1_v5_gn_8_126000 Lactuca sativa HOM05D006293 ORTHO05D007971 1.9e-84 317.0 361 49.0
MELO3C020791.2 Cucumis melo HOM05D006293 ORTHO05D007971 2.1e-83 313.5 340 55.9
ATR0810G191 Amborella trichopoda HOM05D006293 ORTHO05D007971 1.3e-82 310.8 350 48.3
Sc14g0002130 Simmondsia chinensis HOM05D006293 ORTHO05D007971 3.0e-82 309.7 358 50.6
PSO170G2363 Papaver somniferum HOM05D006293 ORTHO05D007971 5.1e-82 308.9 375 61.1
BcaC04g23011 Brassica carinata HOM05D006293 ORTHO05D007971 1.5e-81 307.4 370 54.3
BolC9t54199H Brassica oleracea HOM05D006293 ORTHO05D007971 2.5e-81 306.6 370 54.3
C09p13060 Brassica napus HOM05D006293 ORTHO05D007971 5.6e-81 305.4 370 54.1
CARHR106850 Cardamine hirsuta HOM05D006293 ORTHO05D007971 7.3e-81 305.1 355 50.7
AL3G49260 Arabidopsis lyrata HOM05D006293 ORTHO05D007971 2.8e-80 303.1 362 57.2
BcaC06g36161 Brassica carinata HOM05D006293 ORTHO05D007971 1.4e-79 300.8 357 55.5
C07p07090 Brassica napus HOM05D006293 ORTHO05D007971 1.4e-79 300.8 357 55.5
BolC7t41128H Brassica oleracea HOM05D006293 ORTHO05D007971 1.4e-79 300.8 357 55.5
BraA07t28238Z Brassica rapa HOM05D006293 ORTHO05D007971 1.4e-79 300.8 357 55.5
Sp3g30120 Schrenkiella parvula HOM05D006293 ORTHO05D007971 2.4e-79 300.1 379 59.6
BcaB07g31757 Brassica carinata HOM05D006293 ORTHO05D007971 4.0e-79 299.3 359 59.1
BraA09t36749Z Brassica rapa HOM05D006293 ORTHO05D007971 4.0e-79 299.3 368 56.0
AUR62010081 Chenopodium quinoa HOM05D006293 ORTHO05D007971 5.3e-79 298.9 363 47.7
A07p04460 Brassica napus HOM05D006293 ORTHO05D007971 6.9e-79 298.5 357 54.9
A09p11050 Brassica napus HOM05D006293 ORTHO05D007971 6.9e-79 298.5 368 56.0
Carub.0003s3038 Capsella rubella HOM05D006293 ORTHO05D007971 1.5e-78 297.4 376 54.5
AUR62013075 Chenopodium quinoa HOM05D006293 ORTHO05D007971 3.8e-77 292.7 369 46.6
Thhalv10022734m.g Eutrema salsugineum HOM05D006293 ORTHO05D007971 3.8e-77 292.7 374 59.6
AT2G16630 Arabidopsis thaliana HOM05D006293 ORTHO05D007971 4.2e-76 289.3 366 54.6
Aqoxy5G00988 Aquilegia oxysepala HOM05D006293 ORTHO05D007971 7.1e-76 288.5 347 48.4
ECA233G0605 Erigeron canadensis HOM05D001375 ORTHO05D001222 1.0e-74 284.6 362 48.1
PSO700G0292 Papaver somniferum HOM05D006293 ORTHO05D007971 3.0e-74 283.1 358 46.4
DCAR_003705 Daucus carota HOM05D006293 ORTHO05D007971 5.1e-74 282.3 360 50.6
MBI05_g07501_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 5.1e-74 282.3 348 42.8
Aa31LG8G13900 Aethionema arabicum HOM05D006293 ORTHO05D007971 6.7e-74 282.0 353 54.1
MBI05_g30117_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 1.5e-73 280.8 348 42.0
MBI05_g47219_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 1.5e-73 280.8 348 43.1
Ah.01g022670 Amaranthus hybridus HOM05D006293 ORTHO05D007971 5.6e-73 278.9 353 47.0
CsaV3_2G015780 Cucumis sativus L. HOM05D006293 ORTHO05D007971 9.9e-70 268.1 364 51.4
MBI05_g48109_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 4.6e-67 259.2 348 40.8
HanXRQChr10g0298941 Helianthus annuus HOM05D006293 ORTHO05D007971 8.7e-66 255.0 360 43.6
Ah.01g009070 Amaranthus hybridus HOM05D006293 ORTHO05D007971 1.1e-65 254.6 341 49.9
Aqoxy1G01171 Aquilegia oxysepala HOM05D006293 ORTHO05D007971 4.8e-64 249.2 296 54.1
unitig_0.g827 Utricularia gibba HOM05D006293 ORTHO05D007971 6.9e-63 245.4 336 46.7
HPP92_013009 Vanilla planifolia HOM05D006293 ORTHO05D007971 1.5e-62 244.2 341 41.9
MD10G1120000 Malus domestica HOM05D006293 ORTHO05D007971 3.8e-61 239.6 128 85.9
CDE05G1002 Ceratophyllum demersum HOM05D006293 ORTHO05D007971 3.3e-57 226.5 356 37.9
MD10G1120100 Malus domestica HOM05D006293 ORTHO05D007971 1.3e-56 224.6 127 81.9
SEGI_19356 Sequoiadendron giganteum HOM05D006293 ORTHO05D007971 2.1e-56 223.8 361 46.0
BcaB03g16385 Brassica carinata HOM05D006293 ORTHO05D007971 3.7e-56 223.0 356 52.0
unitig_0.g43 Utricularia gibba HOM05D006293 ORTHO05D007971 2.6e-54 216.9 349 37.2
PGR042G0330 Punica granatum HOM05D006293 ORTHO05D007971 1.3e-53 214.5 388 42.0
MSTRG.20014 Avicennia marina HOM05D006293 ORTHO05D007971 1.4e-47 194.5 151 64.9
MBI05_g21530_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 5.5e-44 182.6 271 37.3
SEGI_14996 Sequoiadendron giganteum HOM05D006293 ORTHO05D007971 7.9e-43 178.7 368 39.7
Gohir.1Z049391 Gossypium hirsutum HOM05D006293 ORTHO05D007971 9.7e-41 171.8 195 52.3
Nitab4.5_0000283g0050 Nicotiana tabacum HOM05D001375 ORTHO05D001222 2.8e-40 170.2 116 61.2
ECA234G1535 Erigeron canadensis HOM05D001991 ORTHO05D007971 1.0e-34 151.8 151 48.3
Mapoly0014s0128 Marchantia polymorpha HOM05D006293 ORTHO05D007971 1.3e-29 134.8 359 33.4
Zm00001eb210030 Zea mays HOM05D006293 ORTHO05D007971 3.0e-26 123.6 139 45.3
Aqoxy6G00177 Aquilegia oxysepala HOM05D006293 ORTHO05D007971 1.3e-24 118.2 111 50.5
SEGI_23181 Sequoiadendron giganteum HOM05D006293 ORTHO05D007971 4.5e-22 109.8 163 43.6
MBI05_g31848_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 4.2e-20 103.2 94 48.9
Pp3c1_27500 Physcomitrium patens HOM05D006293 ORTHO05D007971 9.8e-17 92.0 149 34.9
Pp3c14_8250 Physcomitrium patens HOM05D006293 ORTHO05D007971 4.1e-15 86.7 162 30.2
Actinidia00600 Actinidia chinensis HOM05D006293 ORTHO05D007971 1.0e-13 82.0 62 64.5
SMO223G0025 Selaginella moellendorffii HOM05D006293 ORTHO05D007971 1.9e-12 77.8 152 32.9
SGA_v2.0_scaffold9G04828 Striga asiatica HOM05D006293 ORTHO05D007971 9.8e-09 65.5 64 50.0
AagrBONN_evm.TU.Sc2ySwM_368.1639 Anthoceros agrestis HOM05D006293 ORTHO05D009176 3.1e-07 60.5 145 31.7
Mapoly0022s0141 Marchantia polymorpha HOM05D021038 ORTHO05D009018 4.5e-06 56.6 94 35.1


User provided reference genes

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