Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN24G0814 Fragaria x ananassa HOM05D008520 ORTHO05D009890 1.5e-43 179.1 92 100.0
FAN05G4777 Fragaria x ananassa HOM05D008520 ORTHO05D009890 7.7e-43 176.8 92 97.8
FAN15G0381 Fragaria x ananassa HOM05D008520 ORTHO05D009890 7.7e-43 176.8 92 97.8
FAN20G0555 Fragaria x ananassa HOM05D008520 ORTHO05D009890 7.7e-43 176.8 92 97.8
FvH4_2g07390 Fragaria vesca HOM05D008520 ORTHO05D009890 1.1e-41 172.9 89 98.9
RcHm_v2.0_Chr6g0260831 Rosa chinensis HOM05D008520 ORTHO05D009890 6.1e-32 140.6 92 80.4
Prupe.8G111600 Prunus persica HOM05D008520 ORTHO05D009890 2.8e-13 78.6 92 56.5
Prupe.8G112200 Prunus persica HOM05D008520 ORTHO05D009890 2.8e-13 78.6 92 56.5
Prupe.8G112000 Prunus persica HOM05D008520 ORTHO05D009890 2.4e-12 75.5 92 56.5
Prupe.8G110900 Prunus persica HOM05D008520 ORTHO05D009890 1.2e-11 73.2 92 53.3
Prupe.8G111400 Prunus persica HOM05D008520 ORTHO05D009890 1.2e-11 73.2 92 54.3
Prupe.8G111800 Prunus persica HOM05D008520 ORTHO05D009890 4.5e-11 71.2 92 54.3
Thecc.02G029000 Theobroma cacao HOM05D008520 ORTHO05D009890 5.0e-10 67.8 92 50.0
Lj3g0002198 Lotus japonicus HOM05D008520 ORTHO05D009890 1.1e-09 66.6 92 48.9
Glyma.11G123300 Glycine max HOM05D008520 ORTHO05D009890 2.5e-09 65.5 92 45.7
COL.COLO4_17779 Corchorus olitorius HOM05D008520 ORTHO05D009890 4.3e-09 64.7 93 43.0
Gohir.D01G172800 Gossypium hirsutum HOM05D008520 ORTHO05D009890 9.5e-09 63.5 93 47.3
Gorai.002G214400 Gossypium raimondii HOM05D008520 ORTHO05D009890 9.5e-09 63.5 93 47.3
Phvul.011G050000 Phaseolus vulgaris HOM05D008520 ORTHO05D009890 4.7e-08 61.2 92 44.6
arahy.Tifrunner.gnm1.ann1.4L7A6H Arachis hypogaea HOM05D008520 ORTHO05D009890 8.0e-08 60.5 92 44.6
arahy.Tifrunner.gnm1.ann1.H0FE8D Arachis hypogaea HOM05D008520 ORTHO05D009890 8.0e-08 60.5 92 44.6
Gohir.A01G181700 Gossypium hirsutum HOM05D008520 ORTHO05D009890 8.0e-08 60.5 93 46.2
Medtr4g068560 Medicago truncatula HOM05D008520 ORTHO05D009890 1.8e-07 59.3 92 46.7
CSS0029741 Camellia sinensis var. sinensis HOM05D008520 ORTHO05D009890 4.0e-07 58.2 90 41.1
Cfa004952 Carpinus fangiana HOM05D008520 ORTHO05D009890 5.2e-07 57.8 91 41.8
vmacro02158 Vaccinium macrocarpon HOM05D008520 ORTHO05D009890 5.2e-07 57.8 92 38.0
Manes.15G145900 Manihot esculenta HOM05D008520 ORTHO05D009890 6.8e-07 57.4 90 43.3
Potri.004G148200 Populus trichocarpa HOM05D008520 ORTHO05D009890 8.9e-07 57.0 90 43.3
Eucgr.G00506 Eucalyptus grandis HOM05D012043 ORTHO05D009890 1.2e-06 56.6 92 39.1
Lalb_Chr01g0002971 Lupinus albus HOM05D008520 ORTHO05D009890 1.2e-06 56.6 93 43.0
Glyma.07G163300 Glycine max HOM05D008520 ORTHO05D009890 3.4e-06 55.1 90 40.0
Potri.009G109300 Populus trichocarpa HOM05D008520 ORTHO05D009890 3.4e-06 55.1 95 41.1
Atru.chr5.2897 Acer truncatum HOM05D008520 ORTHO05D009890 4.4e-06 54.7 92 44.6
Glyma.12G048000 Glycine max HOM05D008520 ORTHO05D009890 4.4e-06 54.7 92 39.1
Haze_02458 Corylus avellana HOM05D008520 ORTHO05D009890 7.5e-06 53.9 90 42.2
Ciclev10029756m.g Citrus clementina HOM05D008520 ORTHO05D009890 9.8e-06 53.5 92 40.2


User provided reference genes

Program Settings