Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN24G0450 Fragaria x ananassa HOM05D007054 ORTHO05D008888 8.4e-63 243.4 115 100.0
FvH4_2g07010 Fragaria vesca HOM05D007054 ORTHO05D008888 1.0e-60 236.5 114 97.4
FAN24G1908 Fragaria x ananassa HOM05D007054 ORTHO05D008888 1.0e-60 236.5 114 97.4
FAN27G0716 Fragaria x ananassa HOM05D007054 ORTHO05D008888 5.8e-56 220.7 127 85.0
FAN15G2151 Fragaria x ananassa HOM05D007054 ORTHO05D008888 2.2e-55 218.8 122 88.5
FvH4_2g06990 Fragaria vesca HOM05D007054 ORTHO05D008888 3.9e-52 208.0 106 93.4
RcHm_v2.0_Chr6g0259351 Rosa chinensis HOM05D007054 ORTHO05D008888 1.7e-47 192.6 115 81.7
Prupe.8G115700 Prunus persica HOM05D007054 ORTHO05D008888 3.7e-34 148.3 113 65.5
MD00G1050600 Malus domestica HOM05D007054 ORTHO05D008888 3.9e-28 128.3 114 56.1
Cfa005418 Carpinus fangiana HOM05D007054 ORTHO05D008888 3.8e-23 111.7 114 52.6
Haze_01879 Corylus avellana HOM05D007054 ORTHO05D008888 3.8e-23 111.7 113 50.4
Manes.15G143900 Manihot esculenta HOM05D007054 ORTHO05D008888 5.5e-22 107.8 114 50.0
CiPaw.05G055500 Carya illinoinensis HOM05D007054 ORTHO05D008888 7.9e-21 104.0 115 49.6
Sabra04G0096600 Salix brachista HOM05D007054 ORTHO05D008888 8.7e-20 100.5 115 47.8
Atru.chr5.2831 Acer truncatum HOM05D007054 ORTHO05D008888 2.5e-19 99.0 117 47.0
Potri.004G145600 Populus trichocarpa HOM05D007054 ORTHO05D008888 9.7e-19 97.1 113 47.8
QL11p038609 Quercus lobata HOM05D007054 ORTHO05D008888 2.8e-18 95.5 114 44.7
Dinv42118 Davidia involucrata HOM05D007054 ORTHO05D008888 1.4e-17 93.2 106 45.3
Duzib132G1179 Durio zibethinus HOM05D007054 ORTHO05D008888 2.4e-17 92.4 122 44.3
Thecc.02G095100 Theobroma cacao HOM05D007054 ORTHO05D008888 5.3e-17 91.3 115 42.6
Hma1.2p1_1543F.1_g289790 Hydrangea macrophylla HOM05D007054 ORTHO05D008888 1.2e-16 90.1 115 43.5
ClCG02G005650 Citrullus lanatus HOM05D007054 ORTHO05D008888 4.5e-16 88.2 109 45.0
Gohir.A12G026500 Gossypium hirsutum HOM05D007054 ORTHO05D008888 5.9e-16 87.8 115 41.7
Gorai.008G026400 Gossypium raimondii HOM05D007054 ORTHO05D008888 5.9e-16 87.8 115 41.7
Gohir.D12G026100 Gossypium hirsutum HOM05D007054 ORTHO05D008888 7.7e-16 87.4 115 41.7
Ciclev10029145m.g Citrus clementina HOM05D007054 ORTHO05D008888 1.0e-15 87.0 112 42.9
TWI79G0983 Tripterygium wilfordii HOM05D007054 ORTHO05D008888 1.0e-15 87.0 115 41.7
MELO3C018427.2 Cucumis melo HOM05D007054 ORTHO05D008888 2.2e-15 85.9 106 45.3
Phvul.003G012100 Phaseolus vulgaris HOM05D007054 ORTHO05D008888 6.5e-15 84.3 113 45.1
PGR142G2758 Punica granatum HOM05D007054 ORTHO05D008888 1.4e-14 83.2 62 56.5
CsaV3_7G008860 Cucumis sativus L. HOM05D007054 ORTHO05D008888 1.9e-14 82.8 106 45.3
VMungo1215G1743 Vigna mungo HOM05D007054 ORTHO05D008888 1.9e-14 82.8 83 50.6
TAR381G0282 Trochodendron aralioides HOM05D007054 ORTHO05D008888 2.5e-14 82.4 115 39.1
Ca_12472_v3 Cicer arietinum L. HOM05D007054 ORTHO05D008888 4.2e-14 81.6 81 49.4
Sed0021769 Sechium edule HOM05D007054 ORTHO05D008888 4.2e-14 81.6 64 53.1
CANSAT25G1642 Cannabis sativa HOM05D007054 ORTHO05D008888 5.5e-14 81.3 100 50.0
TAR625G1358 Trochodendron aralioides HOM05D007054 ORTHO05D008888 7.2e-14 80.9 115 40.9
Glyma.20G009500 Glycine max HOM05D007054 ORTHO05D008888 2.1e-13 79.3 110 44.5
COL.COLO4_11726 Corchorus olitorius HOM05D005562 ORTHO05D007785 7.9e-13 77.4 74 47.3
CANSAT25G2549 Cannabis sativa HOM05D007054 ORTHO05D008888 1.8e-12 76.3 84 51.2
Lalb_Chr01g0013331 Lupinus albus HOM05D007054 ORTHO05D008888 1.8e-12 76.3 73 50.7
Glyma.07G179400 Glycine max HOM05D007054 ORTHO05D008888 3.9e-12 75.1 111 42.3
Lj2g0019135 Lotus japonicus HOM05D007054 ORTHO05D008888 5.1e-12 74.7 106 42.5
Cc02_g18390 Coffea canephora HOM05D007054 ORTHO05D008888 6.7e-12 74.3 46 63.0
Psat6g096080 Pisum sativum HOM05D007054 ORTHO05D008888 6.7e-12 74.3 106 42.5
CSS0047307 Camellia sinensis var. sinensis HOM05D007054 ORTHO05D008888 1.5e-11 73.2 72 45.8
Cpa.g.sc62.54 Carica papaya HOM05D007054 ORTHO05D008888 2.5e-11 72.4 54 59.3
SalBow3G3466 Salvia bowleyana HOM05D007054 ORTHO05D008888 4.3e-11 71.6 65 50.8
Peaxi162Scf00016g01532 Petunia axillaris HOM05D007054 ORTHO05D008888 9.7e-11 70.5 100 34.0
Ah.01g002690 Amaranthus hybridus HOM05D007054 ORTHO05D008888 2.2e-10 69.3 100 36.0
TPR.G11147 Trifolium pratense HOM05D007054 ORTHO05D008888 3.7e-10 68.6 66 51.5
GSVIVG01031807001 Vitis vinifera HOM05D007054 ORTHO05D008888 3.7e-10 68.6 79 39.2
Oeu057672.1 Olea europaea HOM05D007054 ORTHO05D008888 8.2e-10 67.4 46 54.3
Medtr1g034050 Medicago truncatula HOM05D007054 ORTHO05D008888 1.1e-09 67.0 55 58.2
THA.LOC104798802 Tarenaya hassleriana HOM05D007054 ORTHO05D008888 1.1e-09 67.0 110 34.5
Nitab4.5_0001401g0040 Nicotiana tabacum HOM05D007054 ORTHO05D008888 4.1e-09 65.1 50 52.0
Sopen01g050870 Solanum pennellii HOM05D007054 ORTHO05D008888 4.1e-09 65.1 103 36.9
Nitab4.5_0003726g0060 Nicotiana tabacum HOM05D007054 ORTHO05D008888 5.3e-09 64.7 103 34.0
Oeu021925.1 Olea europaea HOM05D007054 ORTHO05D008888 6.9e-09 64.3 50 44.0
PSO541G2621 Papaver somniferum HOM05D007054 ORTHO05D008888 6.9e-09 64.3 58 41.4
PSO675G3773 Papaver somniferum HOM05D007054 ORTHO05D008888 6.9e-09 64.3 58 41.4
Eucgr.I01181 Eucalyptus grandis HOM05D007054 ORTHO05D008888 9.1e-09 63.9 58 44.8
ATR0767G176 Amborella trichopoda HOM05D007054 ORTHO05D008888 1.5e-08 63.2 98 34.7
Solyc01g108650.3 Solanum lycopersicum HOM05D007054 ORTHO05D008888 2.0e-08 62.8 103 35.9
PGSC0003DMG400025902 Solanum tuberosum HOM05D007054 ORTHO05D008888 2.0e-08 62.8 82 37.8
MBI16_g08580_MAGBIO Magnolia biondii HOM05D007054 ORTHO05D008888 2.6e-08 62.4 65 43.1
CAN.G322.40 Capsicum annuum HOM05D007054 ORTHO05D008888 7.7e-08 60.8 106 34.9
HanXRQChr12g0374541 Helianthus annuus HOM05D007054 ORTHO05D008888 7.7e-08 60.8 114 39.5
Lj9C361T14 Lonicera japonica HOM05D007054 ORTHO05D008888 7.7e-08 60.8 44 54.5
SGA_v2.0_scaffold9G04688 Striga asiatica HOM05D007054 ORTHO05D008888 1.0e-07 60.5 57 47.4
Sc26g0004390 Simmondsia chinensis HOM05D007054 ORTHO05D008888 1.3e-07 60.1 48 52.1
Aa31LG8G5880 Aethionema arabicum HOM05D007054 ORTHO05D008888 1.7e-07 59.7 48 47.9
Aqoxy2G00166 Aquilegia oxysepala HOM05D007054 ORTHO05D008888 1.7e-07 59.7 57 38.6
arahy.Tifrunner.gnm1.ann1.M7JB84 Arachis hypogaea HOM05D007054 ORTHO05D008888 1.7e-07 59.7 51 54.9
Nitab4.5_0000604g0160 Nicotiana tabacum HOM05D007054 ORTHO05D008888 1.7e-07 59.7 51 49.0
AUR62003054 Chenopodium quinoa HOM05D007054 ORTHO05D008888 6.5e-07 57.8 58 39.7
Nn5g29374 Nelumbo nucifera HOM05D007054 ORTHO05D008888 6.5e-07 57.8 50 48.0
AUR62007867 Chenopodium quinoa HOM05D007054 ORTHO05D008888 1.4e-06 56.6 58 37.9
Actinidia17847 Actinidia chinensis HOM05D000827 ORTHO05D008888 4.2e-06 55.1 80 41.2


User provided reference genes

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