Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN24G0436 Fragaria x ananassa HOM05D006137 ORTHO05D007697 3.3e-237 824.7 439 100.0
FvH4_2g06760 Fragaria vesca HOM05D006137 ORTHO05D007697 4.7e-183 644.8 336 97.9
FAN08G1929 Fragaria x ananassa HOM05D006137 ORTHO05D007697 4.5e-157 558.5 340 87.6
FAN04G0555 Fragaria x ananassa HOM05D006137 ORTHO05D007697 2.2e-156 556.2 340 87.4
FvH4_5g23010 Fragaria vesca HOM05D006137 ORTHO05D007697 4.2e-155 552.0 339 87.0
FAN13G2862 Fragaria x ananassa HOM05D006137 ORTHO05D007697 1.0e-153 547.4 357 83.2
FAN18G2637 Fragaria x ananassa HOM05D006137 ORTHO05D007697 6.9e-150 534.6 376 78.7
RcHm_v2.0_Chr7g0211741 Rosa chinensis HOM05D006137 ORTHO05D007697 2.0e-149 533.1 344 84.0
FAN18G2668 Fragaria x ananassa HOM05D006137 ORTHO05D007697 5.0e-140 501.9 277 93.5
MD06G1026400 Malus domestica HOM05D006137 ORTHO05D007697 3.9e-129 465.7 313 75.4
FAN20G1935 Fragaria x ananassa HOM05D006137 ORTHO05D007697 6.7e-129 464.9 402 70.6
CiPaw.11G098100 Carya illinoinensis HOM05D006137 ORTHO05D007697 5.7e-120 435.3 299 73.6
Ciclev10001458m.g Citrus clementina HOM05D006137 ORTHO05D007697 2.2e-119 433.3 292 71.9
TWI15G1160 Tripterygium wilfordii HOM05D006137 ORTHO05D007697 1.4e-118 430.6 294 72.8
Thecc.03G309800 Theobroma cacao HOM05D006137 ORTHO05D007697 1.8e-118 430.3 278 75.9
Gohir.D12G208800 Gossypium hirsutum HOM05D006137 ORTHO05D007697 2.4e-118 429.9 328 67.1
Duzib068G1414 Durio zibethinus HOM05D006137 ORTHO05D007697 3.1e-118 429.5 289 73.7
Gohir.A12G206400 Gossypium hirsutum HOM05D006137 ORTHO05D007697 4.1e-118 429.1 328 67.1
Gorai.008G224300 Gossypium raimondii HOM05D006137 ORTHO05D007697 1.2e-117 427.6 328 66.8
Potri.003G096600 Populus trichocarpa HOM05D006137 ORTHO05D007697 3.8e-116 422.5 347 63.4
ClCG10G001310 Citrullus lanatus HOM05D006137 ORTHO05D007697 5.0e-116 422.2 298 70.8
GSVIVG01013108001 Vitis vinifera HOM05D006137 ORTHO05D007697 1.1e-115 421.0 297 72.1
CSS0021967 Camellia sinensis var. sinensis HOM05D006137 ORTHO05D007697 1.5e-115 420.6 299 70.2
COL.COLO4_16947 Corchorus olitorius HOM05D006137 ORTHO05D007697 1.9e-115 420.2 276 73.9
MELO3C013825.2 Cucumis melo HOM05D006137 ORTHO05D007697 1.9e-115 420.2 283 72.4
Dinv25255 Davidia involucrata HOM05D006137 ORTHO05D007697 1.9e-115 420.2 278 74.8
CsaV3_3G001380 Cucumis sativus L. HOM05D006137 ORTHO05D007697 5.5e-115 418.7 283 71.7
CSS0050317 Camellia sinensis var. sinensis HOM05D006137 ORTHO05D007697 1.6e-114 417.2 276 74.3
TAR629G2895 Trochodendron aralioides HOM05D006137 ORTHO05D007697 1.6e-114 417.2 289 71.6
Atru.chr6.1520 Acer truncatum HOM05D006137 ORTHO05D007697 6.1e-114 415.2 281 72.6
QL12p001513 Quercus lobata HOM05D006137 ORTHO05D007697 8.0e-114 414.8 337 64.7
vmacro08163 Vaccinium macrocarpon HOM05D006137 ORTHO05D007697 8.0e-114 414.8 347 61.4
Glyma.01G014900 Glycine max HOM05D006137 ORTHO05D007697 2.0e-112 410.2 295 68.8
Sabra03G0065200 Salix brachista HOM05D006137 ORTHO05D007697 5.7e-112 408.7 277 72.2
Lj3g0008594 Lotus japonicus HOM05D006137 ORTHO05D007697 7.5e-112 408.3 327 63.9
Lalb_Chr09g0325501 Lupinus albus HOM05D006137 ORTHO05D007697 9.8e-112 407.9 303 68.0
VMungo1215G0535 Vigna mungo HOM05D006137 ORTHO05D007697 9.8e-112 407.9 284 70.4
TPR.G19427 Trifolium pratense HOM05D006137 ORTHO05D007697 4.8e-111 405.6 307 65.5
Medtr5g029550 Medicago truncatula HOM05D006137 ORTHO05D007697 1.4e-110 404.1 298 65.8
PGR042G0393 Punica granatum HOM05D006137 ORTHO05D007697 1.8e-110 403.7 294 68.7
Hma1.2p1_1027F.1_g249480 Hydrangea macrophylla HOM05D006137 ORTHO05D007697 2.4e-110 403.3 316 66.5
Aqoxy2G03876 Aquilegia oxysepala HOM05D006137 ORTHO05D007697 1.2e-109 401.0 301 65.4
arahy.Tifrunner.gnm1.ann1.3JZK2J Arachis hypogaea HOM05D006137 ORTHO05D007697 2.0e-109 400.2 284 68.0
arahy.Tifrunner.gnm1.ann1.J91B8N Arachis hypogaea HOM05D006137 ORTHO05D007697 2.0e-109 400.2 284 68.0
Phvul.002G137400 Phaseolus vulgaris HOM05D006137 ORTHO05D007697 5.9e-109 398.7 320 63.1
Sc24g0002950 Simmondsia chinensis HOM05D006137 ORTHO05D007697 1.3e-108 397.5 299 66.6
Sed0022354 Sechium edule HOM05D006137 ORTHO05D007697 3.8e-108 396.0 305 66.6
Carub.0004s1719 Capsella rubella HOM05D006137 ORTHO05D007697 1.9e-107 393.7 279 68.8
Thhalv10016768m.g Eutrema salsugineum HOM05D006137 ORTHO05D007697 1.9e-107 393.7 279 69.2
CANSAT21G0809 Cannabis sativa HOM05D006137 ORTHO05D007697 3.3e-107 392.9 287 67.6
BcaB06g28845 Brassica carinata HOM05D006137 ORTHO05D007697 4.2e-107 392.5 282 67.7
A04p26930 Brassica napus HOM05D006137 ORTHO05D007697 1.2e-106 391.0 282 67.7
C04p64320 Brassica napus HOM05D006137 ORTHO05D007697 1.2e-106 391.0 282 67.7
CANSAT21G0548 Cannabis sativa HOM05D006137 ORTHO05D007697 1.2e-106 391.0 287 67.2
AT2G35500 Arabidopsis thaliana HOM05D006137 ORTHO05D007697 1.6e-106 390.6 279 68.5
Rhsim11G0021000 Rhododendron simsii HOM05D006137 ORTHO05D007697 1.6e-106 390.6 343 60.9
AL4G31550 Arabidopsis lyrata HOM05D006137 ORTHO05D007697 2.1e-106 390.2 300 64.7
BraA04t18192Z Brassica rapa HOM05D006137 ORTHO05D007697 2.1e-106 390.2 282 67.4
Nn3g19394 Nelumbo nucifera HOM05D006137 ORTHO05D007697 3.6e-106 389.4 341 61.0
CARHR129650 Cardamine hirsuta HOM05D006137 ORTHO05D007697 1.0e-105 387.9 279 68.1
Psat2g138120 Pisum sativum HOM05D006137 ORTHO05D007697 1.4e-105 387.5 290 65.9
BolC4t27919H Brassica oleracea HOM05D006137 ORTHO05D007697 1.8e-105 387.1 282 67.0
Prupe.5G028300 Prunus persica HOM05D006137 ORTHO05D007697 2.3e-105 386.7 342 62.9
Sp4g17720 Schrenkiella parvula HOM05D006137 ORTHO05D007697 3.0e-105 386.3 279 67.4
BcaC02g07708 Brassica carinata HOM05D006137 ORTHO05D007697 3.4e-104 382.9 276 67.8
PSO782G3150 Papaver somniferum HOM05D006137 ORTHO05D007697 2.8e-103 379.8 300 62.0
DCAR_008226 Daucus carota HOM05D006137 ORTHO05D007697 5.4e-102 375.6 272 70.6
Cc08_g03270 Coffea canephora HOM05D006137 ORTHO05D007697 9.2e-102 374.8 310 61.3
EL10Ac2g03238 Beta vulgaris HOM05D006137 ORTHO05D007697 1.2e-101 374.4 296 64.2
Peaxi162Scf00170g00615 Petunia axillaris HOM05D006137 ORTHO05D007697 1.0e-100 371.3 325 60.6
Solyc08g076410.4 Solanum lycopersicum HOM05D006137 ORTHO05D007697 2.3e-100 370.2 295 65.1
Sopen08g024990 Solanum pennellii HOM05D006137 ORTHO05D007697 2.3e-100 370.2 295 65.1
PGSC0003DMG400014792 Solanum tuberosum HOM05D006137 ORTHO05D007697 2.9e-100 369.8 295 65.1
Nitab4.5_0002190g0020 Nicotiana tabacum HOM05D006137 ORTHO05D007697 1.5e-99 367.5 335 58.8
Oeu017078.1 Olea europaea HOM05D006137 ORTHO05D007697 5.6e-99 365.5 281 64.1
PSO063G4597 Papaver somniferum HOM05D006137 ORTHO05D007697 5.6e-99 365.5 326 58.6
ATR0829G218 Amborella trichopoda HOM05D006137 ORTHO05D007697 1.2e-98 364.4 276 64.1
CAN.G726.20 Capsicum annuum HOM05D006137 ORTHO05D007697 1.6e-98 364.0 278 66.2
Lj2A232T29 Lonicera japonica HOM05D006137 ORTHO05D007697 2.1e-98 363.6 328 60.4
HanXRQChr04g0098961 Helianthus annuus HOM05D006137 ORTHO05D007697 4.0e-97 359.4 295 62.4
ECA233G6209 Erigeron canadensis HOM05D006137 ORTHO05D007697 2.0e-96 357.1 348 56.6
THA.LOC104814417 Tarenaya hassleriana HOM05D006137 ORTHO05D007697 2.0e-96 357.1 302 59.9
CDE06G2536 Ceratophyllum demersum HOM05D006137 ORTHO05D007697 4.4e-96 355.9 321 58.6
Aa31LG9G15490 Aethionema arabicum HOM05D006137 ORTHO05D007697 2.2e-95 353.6 246 70.3
Eucgr.E00233 Eucalyptus grandis HOM05D006137 ORTHO05D007697 8.3e-95 351.7 242 71.9
SGA_v2.0_scaffold36G14297 Striga asiatica HOM05D006137 ORTHO05D007697 4.1e-94 349.4 321 58.3
Migut.A01172 Erythranthe guttata HOM05D006137 ORTHO05D007697 7.0e-94 348.6 283 63.6
Oeu019613.1 Olea europaea HOM05D006137 ORTHO05D007697 6.0e-93 345.5 281 61.2
Ah.09g233490 Amaranthus hybridus HOM05D006137 ORTHO05D007697 7.8e-93 345.1 295 58.6
Haze_08142 Corylus avellana HOM05D006137 ORTHO05D007697 3.0e-92 343.2 468 46.2
HPP92_014848 Vanilla planifolia HOM05D006137 ORTHO05D007697 1.9e-91 340.5 286 58.7
Os10g0577700 Oryza sativa ssp. japonica HOM05D006137 ORTHO05D007697 2.8e-90 336.7 348 52.6
Nitab4.5_0003416g0030 Nicotiana tabacum HOM05D006137 ORTHO05D007697 4.7e-90 335.9 306 59.2
Lsat_1_v5_gn_6_3681 Lactuca sativa HOM05D006137 ORTHO05D007697 7.5e-88 328.6 286 59.1
MSTRG.24846 Avicennia marina HOM05D006137 ORTHO05D007697 8.3e-87 325.1 295 56.6
Oeu019614.1 Olea europaea HOM05D006137 ORTHO05D007697 1.1e-86 324.7 336 52.4
unitig_748.g7545 Utricularia gibba HOM05D006137 ORTHO05D007697 4.6e-85 319.3 303 56.8
Oeu002327.1 Olea europaea HOM05D006137 ORTHO05D007697 8.1e-82 308.5 220 66.8
Eucgr.E00231 Eucalyptus grandis HOM05D006137 ORTHO05D007697 2.6e-80 303.5 266 60.5
Zm00001eb025030 Zea mays HOM05D006137 ORTHO05D007697 5.8e-80 302.4 332 48.8
SEGI_14560 Sequoiadendron giganteum HOM05D006137 ORTHO05D007697 1.1e-75 288.1 359 44.6
Manes.15G185701 Manihot esculenta HOM05D006137 ORTHO05D007697 1.4e-70 271.2 224 64.3
Ca_25185_v3 Cicer arietinum L. HOM05D006137 ORTHO05D007697 1.8e-65 254.2 192 65.1
Mapoly0006s0263 Marchantia polymorpha HOM05D006137 ORTHO05D007697 1.3e-63 248.1 287 46.3
SMO228G0118 Selaginella moellendorffii HOM05D006137 ORTHO05D007697 3.3e-59 233.4 286 43.4
AagrBONN_evm.TU.Sc2ySwM_344.1996 Anthoceros agrestis HOM05D006137 ORTHO05D007697 3.6e-58 229.9 283 43.1
Pp3c12_17740 Physcomitrium patens HOM05D006137 ORTHO05D007697 2.7e-53 213.8 310 38.4
Oeu033557.2 Olea europaea HOM05D006137 ORTHO05D007697 1.3e-47 194.9 149 63.1
AUR62002645 Chenopodium quinoa HOM05D006137 ORTHO05D007697 3.3e-43 180.3 151 60.3
Hund09821 Selenicereus undatus HOM05D006137 ORTHO05D000006 7.4e-43 179.1 138 61.6
AUR62040998 Chenopodium quinoa HOM05D006137 ORTHO05D007697 9.6e-43 178.7 136 62.5
Hund09822 Selenicereus undatus HOM05D006137 ORTHO05D007697 1.7e-39 167.9 124 66.1
AUR62002644 Chenopodium quinoa HOM05D006137 ORTHO05D007697 1.2e-37 161.8 176 48.9
Glyma.07G152633 Glycine max HOM05D006137 ORTHO05D007697 1.3e-36 158.3 112 67.9
C03p78000 Brassica napus HOM05D006137 ORTHO05D007697 5.3e-33 146.4 133 56.4
Medtr1g009450 Medicago truncatula HOM05D006137 ORTHO05D007697 7.4e-27 125.9 129 52.7
BolC1t02019H Brassica oleracea HOM05D006137 ORTHO05D007697 2.2e-26 124.4 138 50.0
AUR62040999 Chenopodium quinoa HOM05D006137 ORTHO05D007697 3.1e-25 120.6 86 68.6
BolC3t20061H Brassica oleracea HOM05D006137 ORTHO05D007697 4.2e-22 110.2 78 64.1
C01p20920 Brassica napus HOM05D006137 ORTHO05D007697 7.2e-22 109.4 138 44.2
CBR_g18978 Chara braunii HOM05D006137 ORTHO05D007697 4.8e-18 96.7 154 38.3
MCO11G470 Micromonas commoda HOM05D006137 ORTHO05D007697 4.8e-18 96.7 172 33.1
BcaC09g50780 Brassica carinata HOM05D006137 ORTHO05D007697 1.4e-09 68.6 119 39.5
PRCOL_00002339 Prasinoderma coloniale HOM05D006137 ORTHO05D007697 2.0e-08 64.7 124 33.1
SEGI_36463 Sequoiadendron giganteum HOM05D002058 ORTHO05D009216 1.5e-06 58.5 125 34.4
Mapoly0035s0139 Marchantia polymorpha HOM05D002058 ORTHO05D003758 3.2e-06 57.4 149 30.2


User provided reference genes

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