Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN24G0255 Fragaria x ananassa HOM05D005447 ORTHO05D006730 2.2e-73 278.9 143 100.0
FvH4_2g32160 Fragaria vesca HOM05D005447 ORTHO05D006730 4.2e-72 274.6 140 99.3
FAN27G1388 Fragaria x ananassa HOM05D005447 ORTHO05D006730 9.4e-72 273.5 140 98.6
FAN20G2744 Fragaria x ananassa HOM05D005447 ORTHO05D006730 2.7e-71 271.9 141 97.9
RcHm_v2.0_Chr6g0310521 Rosa chinensis HOM05D005447 ORTHO05D006730 5.2e-62 241.1 140 85.7
Prupe.1G414700 Prunus persica HOM05D005447 ORTHO05D006730 5.9e-50 201.1 135 74.8
MD08G1073300 Malus domestica HOM05D005447 ORTHO05D006730 1.3e-49 199.9 142 73.2
EL10Ac2g03925 Beta vulgaris HOM05D005447 ORTHO05D006730 1.2e-47 193.4 141 69.5
Cfa017935 Carpinus fangiana HOM05D005447 ORTHO05D006730 2.7e-47 192.2 137 71.5
Prupe.6G150100 Prunus persica HOM05D005447 ORTHO05D006730 2.7e-47 192.2 143 72.0
Manes.16G078100 Manihot esculenta HOM05D005447 ORTHO05D006730 6.8e-46 187.6 141 70.2
Dinv27967 Davidia involucrata HOM05D005447 ORTHO05D006730 8.8e-46 187.2 140 69.3
Cpa.g.sc7.194 Carica papaya HOM05D005447 ORTHO05D006730 1.2e-45 186.8 143 67.1
AUR62022047 Chenopodium quinoa HOM05D005447 ORTHO05D006730 1.2e-45 186.8 137 70.1
CiPaw.16G030000 Carya illinoinensis HOM05D005447 ORTHO05D006730 3.4e-45 185.3 142 69.0
Psat5g036560 Pisum sativum HOM05D005447 ORTHO05D006730 7.5e-45 184.1 136 64.7
CSS0008615 Camellia sinensis var. sinensis HOM05D005447 ORTHO05D006730 1.7e-44 183.0 129 70.5
PGR044G0161 Punica granatum HOM05D005447 ORTHO05D006730 1.7e-44 183.0 141 67.4
Actinidia30302 Actinidia chinensis HOM05D005447 ORTHO05D006730 2.2e-44 182.6 128 71.9
CANSAT25G3707 Cannabis sativa HOM05D005447 ORTHO05D006730 2.8e-44 182.2 128 70.3
arahy.Tifrunner.gnm1.ann1.PT16FZ Arachis hypogaea HOM05D005447 ORTHO05D006730 1.4e-43 179.9 142 65.5
AUR62009181 Chenopodium quinoa HOM05D005447 ORTHO05D006730 1.8e-43 179.5 138 65.9
arahy.Tifrunner.gnm1.ann1.H6GXLW Arachis hypogaea HOM05D005447 ORTHO05D006730 3.1e-43 178.7 142 64.8
CSS0040006 Camellia sinensis var. sinensis HOM05D005447 ORTHO05D006730 3.1e-43 178.7 144 66.0
Sed0025565 Sechium edule HOM05D005447 ORTHO05D006730 9.1e-43 177.2 138 63.8
Eucgr.C03005 Eucalyptus grandis HOM05D005447 ORTHO05D006730 1.2e-42 176.8 141 62.4
Eucgr.C03947 Eucalyptus grandis HOM05D005447 ORTHO05D006730 1.2e-42 176.8 141 62.4
Phvul.009G076500 Phaseolus vulgaris HOM05D005447 ORTHO05D006730 1.2e-42 176.8 147 61.2
PGSC0003DMG400029302 Solanum tuberosum HOM05D005447 ORTHO05D006730 1.6e-42 176.4 144 64.6
vmacro00161 Vaccinium macrocarpon HOM05D005447 ORTHO05D006730 2.0e-42 176.0 164 59.8
Ca_15869_v3 Cicer arietinum L. HOM05D005447 ORTHO05D006730 2.7e-42 175.6 147 61.9
Oeu036349.1 Olea europaea HOM05D005447 ORTHO05D006730 2.7e-42 175.6 137 65.7
Hund03355 Selenicereus undatus HOM05D005447 ORTHO05D006730 2.7e-42 175.6 141 63.8
VMungo1309G1567 Vigna mungo HOM05D005447 ORTHO05D006730 2.7e-42 175.6 147 61.9
Ciclev10009241m.g Citrus clementina HOM05D005447 ORTHO05D006730 3.5e-42 175.3 141 63.8
Cc08_g10370 Coffea canephora HOM05D005447 ORTHO05D006730 3.5e-42 175.3 129 67.4
Duzib168G1543 Durio zibethinus HOM05D005447 ORTHO05D006730 4.5e-42 174.9 141 66.0
Lj1g0020487 Lotus japonicus HOM05D005447 ORTHO05D006730 4.5e-42 174.9 144 61.1
Lalb_Chr08g0245101 Lupinus albus HOM05D005447 ORTHO05D006730 5.9e-42 174.5 135 62.2
Sopen12g031820 Solanum pennellii HOM05D005447 ORTHO05D006730 7.7e-42 174.1 144 63.9
Medtr3g081440 Medicago truncatula HOM05D005447 ORTHO05D006730 1.0e-41 173.7 146 61.6
C07p59440 Brassica napus HOM05D005447 ORTHO05D006730 1.3e-41 173.3 135 64.4
BolC7t46387H Brassica oleracea HOM05D005447 ORTHO05D006730 1.3e-41 173.3 135 64.4
Glyma.06G051000 Glycine max HOM05D005447 ORTHO05D006730 1.3e-41 173.3 143 62.2
Thecc.09G051400 Theobroma cacao HOM05D005447 ORTHO05D006730 1.3e-41 173.3 141 66.0
Potri.018G061800 Populus trichocarpa HOM05D005447 ORTHO05D006730 1.7e-41 172.9 143 64.3
TAR626G0638 Trochodendron aralioides HOM05D005447 ORTHO05D006730 1.7e-41 172.9 141 65.2
Sabra18G0050000 Salix brachista HOM05D005447 ORTHO05D006730 2.3e-41 172.6 130 67.7
TWI34G1470 Tripterygium wilfordii HOM05D005447 ORTHO05D006730 2.9e-41 172.2 141 64.5
Gorai.009G046500 Gossypium raimondii HOM05D005447 ORTHO05D006730 3.8e-41 171.8 141 65.2
THA.LOC104803734 Tarenaya hassleriana HOM05D005447 ORTHO05D006730 3.8e-41 171.8 128 68.8
Hma1.2p1_1213F.1_g267530 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 5.0e-41 171.4 131 67.2
Hma1.2p1_2708F.1_g327220 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 5.0e-41 171.4 131 67.2
COL.COLO4_21030 Corchorus olitorius HOM05D005447 ORTHO05D006730 6.5e-41 171.0 141 63.8
Solyc12g095920.2 Solanum lycopersicum HOM05D005447 ORTHO05D006730 6.5e-41 171.0 144 63.2
BraA03t15210Z Brassica rapa HOM05D005447 ORTHO05D006730 8.6e-41 170.6 135 64.4
MELO3C016858.2 Cucumis melo HOM05D005447 ORTHO05D006730 8.6e-41 170.6 135 59.3
Gohir.D05G045300 Gossypium hirsutum HOM05D005447 ORTHO05D006730 8.6e-41 170.6 141 64.5
Atru.chr7.2018 Acer truncatum HOM05D005447 ORTHO05D006730 1.1e-40 170.2 141 63.1
Gohir.A05G043700 Gossypium hirsutum HOM05D005447 ORTHO05D006730 1.1e-40 170.2 141 64.5
Nitab4.5_0000738g0170 Nicotiana tabacum HOM05D005447 ORTHO05D006730 1.1e-40 170.2 142 64.1
Duzib187G1160 Durio zibethinus HOM05D005447 ORTHO05D006730 1.5e-40 169.9 143 64.3
Lsat_1_v5_gn_6_7400 Lactuca sativa HOM05D005447 ORTHO05D006730 1.9e-40 169.5 141 61.7
A03p61720 Brassica napus HOM05D005447 ORTHO05D006730 2.5e-40 169.1 135 63.7
QL02p001555 Quercus lobata HOM05D005447 ORTHO05D006730 2.5e-40 169.1 130 67.7
HanXRQChr09g0251181 Helianthus annuus HOM05D005447 ORTHO05D006730 3.3e-40 168.7 144 63.2
Nn8g38949 Nelumbo nucifera HOM05D005447 ORTHO05D006730 3.3e-40 168.7 141 63.1
CsaV3_4G035510 Cucumis sativus L. HOM05D005447 ORTHO05D006730 7.2e-40 167.5 135 58.5
Thhalv10025994m.g Eutrema salsugineum HOM05D005447 ORTHO05D006730 1.2e-39 166.8 135 63.7
SGA_v2.0_scaffold1040G53805 Striga asiatica HOM05D005447 ORTHO05D006730 1.2e-39 166.8 134 64.2
Migut.A00152 Erythranthe guttata HOM05D005447 ORTHO05D006730 2.1e-39 166.0 134 64.2
Peaxi162Scf00064g01636 Petunia axillaris HOM05D005447 ORTHO05D006730 2.8e-39 165.6 129 66.7
SalBow4G2766 Salvia bowleyana HOM05D005447 ORTHO05D006730 2.8e-39 165.6 128 62.5
BcaNung02148 Brassica carinata HOM05D005447 ORTHO05D006730 4.7e-39 164.9 135 63.7
ECA233G2666 Erigeron canadensis HOM05D005447 ORTHO05D006730 4.7e-39 164.9 146 61.0
Hma1.2p1_1944F.1_g308590 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 4.7e-39 164.9 131 66.4
Psat5g106840 Pisum sativum HOM05D005447 ORTHO05D006730 4.7e-39 164.9 141 59.6
CARHR240980 Cardamine hirsuta HOM05D005447 ORTHO05D006730 8.0e-39 164.1 134 62.7
Peaxi162Scf00436g00831 Petunia axillaris HOM05D005447 ORTHO05D006730 8.0e-39 164.1 141 60.3
Aa31sc248G10 Aethionema arabicum HOM05D005447 ORTHO05D006730 1.0e-38 163.7 134 62.7
THA.LOC104818575 Tarenaya hassleriana HOM05D005447 ORTHO05D006730 2.3e-38 162.5 134 62.7
Sp7g30740 Schrenkiella parvula HOM05D005447 ORTHO05D006730 5.2e-38 161.4 135 61.5
Sc06g0000920 Simmondsia chinensis HOM05D005447 ORTHO05D006730 5.2e-38 161.4 129 64.3
Lju3103C0G11 Lonicera japonica HOM05D005447 ORTHO05D006730 6.8e-38 161.0 169 52.7
Hma1.2p1_0482F.1_g162683 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 1.5e-37 159.8 121 67.8
Nitab4.5_0000359g0050 Nicotiana tabacum HOM05D006502 ORTHO05D006730 1.5e-37 159.8 141 61.0
AL7G18730 Arabidopsis lyrata HOM05D005447 ORTHO05D006730 2.0e-37 159.5 134 61.2
Aqoxy7G03929 Aquilegia oxysepala HOM05D005447 ORTHO05D006730 2.6e-37 159.1 133 61.7
AT4G32960 Arabidopsis thaliana HOM05D005447 ORTHO05D006730 2.6e-37 159.1 134 61.2
Aqoxy6G02809 Aquilegia oxysepala HOM05D005447 ORTHO05D006730 5.7e-37 157.9 133 60.9
MSTRG.11670 Avicennia marina HOM05D005447 ORTHO05D006730 1.3e-36 156.8 134 61.9
Carub.0007s0752 Capsella rubella HOM05D005447 ORTHO05D006730 3.7e-36 155.2 140 59.3
PSO832G2924 Papaver somniferum HOM05D005447 ORTHO05D006730 6.3e-36 154.5 129 62.0
CARHR240970 Cardamine hirsuta HOM05D005447 ORTHO05D006730 1.8e-35 152.9 134 59.7
Nitab4.5_0011306g0050 Nicotiana tabacum HOM05D005447 ORTHO05D006730 5.4e-35 151.4 161 55.9
PSO063G2264 Papaver somniferum HOM05D005447 ORTHO05D006730 5.4e-35 151.4 129 61.2
unitig_748.g8015 Utricularia gibba HOM05D005447 ORTHO05D006730 1.2e-34 150.2 139 56.8
VMungo0251G2120 Vigna mungo HOM05D005447 ORTHO05D006730 2.7e-34 149.1 123 56.1
ATR0789G081 Amborella trichopoda HOM05D005447 ORTHO05D006730 5.0e-33 144.8 150 54.0
DCAR_004444 Daucus carota HOM05D005447 ORTHO05D006730 6.6e-33 144.4 128 57.0
Carub.0007s0751 Capsella rubella HOM05D005447 ORTHO05D006730 1.9e-32 142.9 134 60.4
AUR62009180 Chenopodium quinoa HOM05D005447 ORTHO05D006730 1.2e-31 140.2 104 70.2
HPP92_026778 Vanilla planifolia HOM05D005447 ORTHO05D006730 1.6e-31 139.8 129 55.8
DCAR_004445 Daucus carota HOM05D005447 ORTHO05D006730 2.1e-31 139.4 127 54.3
AL7G18720 Arabidopsis lyrata HOM05D005447 ORTHO05D006730 3.0e-30 135.6 134 57.5
Lj7C280G4 Lonicera japonica HOM05D005447 ORTHO05D006730 8.9e-30 134.0 150 49.3
AT4G32970 Arabidopsis thaliana HOM05D005447 ORTHO05D006730 5.8e-29 131.3 134 55.2
Ah.11g044670 Amaranthus hybridus HOM05D005447 ORTHO05D006730 4.1e-27 125.2 99 62.6
Actinidia01202 Actinidia chinensis HOM05D005447 ORTHO05D006730 3.5e-26 122.1 82 68.3
VMungo0540G0355 Vigna mungo HOM05D005447 ORTHO05D006730 3.5e-26 122.1 98 62.2
AUR62025497 Chenopodium quinoa HOM05D005447 ORTHO05D006730 3.9e-25 118.6 84 69.0
SEGI_23140 Sequoiadendron giganteum HOM05D005447 ORTHO05D006730 5.0e-25 118.2 141 46.1
Pp3c6_24590 Physcomitrium patens HOM05D005447 ORTHO05D006730 2.5e-24 115.9 129 46.5
TPR.G36227 Trifolium pratense HOM05D005447 ORTHO05D006730 2.5e-24 115.9 90 61.1
CDE04G0748 Ceratophyllum demersum HOM05D005447 ORTHO05D006730 5.6e-24 114.8 98 60.2
Os06g0150100 Oryza sativa ssp. japonica HOM05D005447 ORTHO05D006730 2.1e-23 112.8 162 42.0
SEGI_08476 Sequoiadendron giganteum HOM05D005447 ORTHO05D006730 2.8e-23 112.5 120 49.2
GSVIVG01035346001 Vitis vinifera HOM05D005447 ORTHO05D006730 4.7e-23 111.7 89 61.8
Mapoly0129s0035 Marchantia polymorpha HOM05D005447 ORTHO05D006730 2.2e-20 102.8 139 39.6
SHI18783 Sapria himalayana HOM05D005447 ORTHO05D006730 2.2e-20 102.8 75 66.7
AagrBONN_evm.TU.Sc2ySwM_344.4531 Anthoceros agrestis HOM05D005447 ORTHO05D006730 1.9e-19 99.8 138 43.5
CBR_g6395 Chara braunii HOM05D005447 ORTHO05D006730 6.6e-17 91.3 140 40.0
Zm00001eb270840 Zea mays HOM05D005447 ORTHO05D006730 4.3e-16 88.6 157 37.6
SMO367G0921 Selaginella moellendorffii HOM05D005447 ORTHO05D006730 1.1e-14 84.0 117 34.2
Nitab4.5_0001179g0010 Nicotiana tabacum HOM05D005447 ORTHO05D006730 5.4e-11 71.6 78 52.6
Haze_18213 Corylus avellana HOM05D005447 ORTHO05D006730 9.2e-11 70.9 54 72.2
AUR62022045 Chenopodium quinoa HOM05D005447 ORTHO05D006730 2.1e-10 69.7 54 66.7
Oeu057690.3 Olea europaea HOM05D005447 ORTHO05D006730 2.7e-10 69.3 54 66.7
FAN15G0839 Fragaria x ananassa HOM05D005447 ORTHO05D006730 7.8e-10 67.8 36 94.4
ClCG05G017740 Citrullus lanatus HOM05D005447 ORTHO05D006730 1.3e-09 67.0 54 61.1
Gorai.010G105200 Gossypium raimondii HOM05D005447 ORTHO05D006730 4.3e-08 62.0 73 46.6
Gohir.D06G091250 Gossypium hirsutum HOM05D005447 ORTHO05D006730 5.6e-08 61.6 73 46.6
Gohir.D06G091325 Gossypium hirsutum HOM05D005447 ORTHO05D006730 5.6e-08 61.6 73 46.6
AUR62022046 Chenopodium quinoa HOM05D005447 ORTHO05D006730 1.2e-07 60.5 103 38.8


User provided reference genes

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