Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN24G0147 Fragaria x ananassa HOM05D007522 ORTHO05D009518 7.8e-192 673.7 360 100.0
FAN27G1610 Fragaria x ananassa HOM05D007522 ORTHO05D009518 5.1e-151 538.1 337 88.7
FvH4_2g30000 Fragaria vesca HOM05D007522 ORTHO05D009518 1.0e-122 444.1 248 98.8
FAN15G2839 Fragaria x ananassa HOM05D007522 ORTHO05D009518 8.0e-120 434.5 248 96.8
RcHm_v2.0_Chr6g0312911 Rosa chinensis HOM05D007522 ORTHO05D009518 5.9e-107 391.7 262 84.0
Prupe.1G467900 Prunus persica HOM05D007522 ORTHO05D009518 1.0e-90 337.8 248 75.8
MD15G1116400 Malus domestica HOM05D007522 ORTHO05D009518 1.7e-82 310.5 248 70.2
Gohir.D13G209500 Gossypium hirsutum HOM05D007522 ORTHO05D009518 3.3e-73 279.6 251 62.5
Gorai.013G238600 Gossypium raimondii HOM05D007522 ORTHO05D009518 7.3e-73 278.5 251 62.5
COL.COLO4_24044 Corchorus olitorius HOM05D007522 ORTHO05D009518 3.6e-72 276.2 250 62.4
Gohir.A13G204200 Gossypium hirsutum HOM05D007522 ORTHO05D009518 8.1e-72 275.0 251 62.2
Sabra06G0193900 Salix brachista HOM05D007522 ORTHO05D009518 8.1e-72 275.0 253 63.2
TPR.G34679 Trifolium pratense HOM05D007522 ORTHO05D009518 4.0e-71 272.7 250 61.2
Potri.006G247900 Populus trichocarpa HOM05D007522 ORTHO05D009518 1.7e-69 267.3 252 63.5
Lj1g0002015 Lotus japonicus HOM05D007522 ORTHO05D009518 6.4e-69 265.4 251 61.0
QL12p031480 Quercus lobata HOM05D007522 ORTHO05D009518 2.4e-68 263.5 242 62.4
GSVIVG01035795001 Vitis vinifera HOM05D007522 ORTHO05D009518 3.2e-68 263.1 251 58.2
Lalb_Chr08g0243841 Lupinus albus HOM05D007522 ORTHO05D009518 4.2e-68 262.7 252 59.1
Glyma.06G072500 Glycine max HOM05D007522 ORTHO05D009518 2.1e-67 260.4 250 58.0
arahy.Tifrunner.gnm1.ann1.J4BCXN Arachis hypogaea HOM05D007522 ORTHO05D009518 7.9e-67 258.5 251 58.6
Phvul.009G097000 Phaseolus vulgaris HOM05D007522 ORTHO05D009518 1.5e-65 254.2 250 57.2
Medtr3g108530 Medicago truncatula HOM05D007522 ORTHO05D009518 1.9e-65 253.8 252 58.3
Ca_15704_v3 Cicer arietinum L. HOM05D000186 ORTHO05D001124 4.3e-65 252.7 255 58.8
Duzib187G1360 Durio zibethinus HOM05D007522 ORTHO05D009518 5.6e-65 252.3 233 62.2
Manes.03G065616 Manihot esculenta HOM05D007522 ORTHO05D009518 5.6e-65 252.3 248 60.5
AL7G19200 Arabidopsis lyrata HOM05D007522 ORTHO05D009518 6.2e-64 248.8 248 56.5
CARHR240530 Cardamine hirsuta HOM05D007522 ORTHO05D009518 1.4e-63 247.7 250 56.0
VMungo1309G1471 Vigna mungo HOM05D007522 ORTHO05D009518 5.3e-63 245.7 249 56.2
Carub.0007s0799 Capsella rubella HOM05D007522 ORTHO05D009518 6.9e-63 245.4 250 56.4
Thhalv10025779m.g Eutrema salsugineum HOM05D007522 ORTHO05D009518 2.0e-62 243.8 250 56.0
CiPaw.07G218500 Carya illinoinensis HOM05D007522 ORTHO05D009518 2.6e-62 243.4 236 59.7
TAR383G0977 Trochodendron aralioides HOM05D007522 ORTHO05D009518 3.4e-62 243.0 251 56.2
Sed0015375 Sechium edule HOM05D007522 ORTHO05D009518 2.9e-61 240.0 250 54.4
Thecc.09G145600 Theobroma cacao HOM05D007522 ORTHO05D009518 6.4e-61 238.8 234 59.8
Actinidia13430 Actinidia chinensis HOM05D007522 ORTHO05D009518 1.4e-60 237.7 242 55.8
AT4G32560 Arabidopsis thaliana HOM05D007522 ORTHO05D009518 3.2e-60 236.5 250 54.0
Sp7g30340 Schrenkiella parvula HOM05D007522 ORTHO05D009518 5.5e-60 235.7 250 54.8
Aa31LG4G11730 Aethionema arabicum HOM05D007522 ORTHO05D009518 1.2e-59 234.6 266 52.3
CSS0007980 Camellia sinensis var. sinensis HOM05D007522 ORTHO05D009518 2.1e-59 233.8 250 54.8
BcaC09g52047 Brassica carinata HOM05D007522 ORTHO05D009518 2.7e-59 233.4 251 55.0
BraA01t00551Z Brassica rapa HOM05D007522 ORTHO05D009518 4.6e-59 232.6 251 55.0
Ciclev10009234m.g Citrus clementina HOM05D007522 ORTHO05D009518 7.9e-59 231.9 233 59.7
PGR044G0714 Punica granatum HOM05D007522 ORTHO05D009518 7.9e-59 231.9 246 54.9
C01p06400 Brassica napus HOM05D007522 ORTHO05D009518 1.0e-58 231.5 251 55.0
BolC1t00636H Brassica oleracea HOM05D007522 ORTHO05D009518 1.0e-58 231.5 251 55.0
arahy.Tifrunner.gnm1.ann1.EE81AI Arachis hypogaea HOM05D007522 ORTHO05D009518 3.0e-58 229.9 208 62.5
A01p05830 Brassica napus HOM05D007522 ORTHO05D009518 3.9e-58 229.6 251 54.6
MELO3C011219.2 Cucumis melo HOM05D007522 ORTHO05D009518 5.1e-58 229.2 251 53.0
CsaV3_2G031690 Cucumis sativus L. HOM05D007522 ORTHO05D009518 9.6e-57 224.9 242 54.5
Oeu014660.1 Olea europaea HOM05D007522 ORTHO05D009518 8.1e-56 221.9 251 50.2
Eucgr.C02850 Eucalyptus grandis HOM05D007522 ORTHO05D009518 1.1e-55 221.5 239 52.7
THA.LOC104819887 Tarenaya hassleriana HOM05D007522 ORTHO05D009518 6.9e-55 218.8 284 49.3
Atru.chr7.2341 Acer truncatum HOM05D007522 ORTHO05D009518 9.0e-55 218.4 214 59.8
Eucgr.C02839 Eucalyptus grandis HOM05D007522 ORTHO05D009518 1.2e-54 218.0 252 51.2
CANSAT11G2673 Cannabis sativa HOM05D007522 ORTHO05D009518 7.6e-54 215.3 202 60.9
HanXRQChr13g0402121 Helianthus annuus HOM05D007522 ORTHO05D009518 7.6e-54 215.3 250 50.0
MSTRG.25867 Avicennia marina HOM05D007522 ORTHO05D009518 1.3e-53 214.5 243 49.8
PSO063G3677 Papaver somniferum HOM05D007522 ORTHO05D009518 2.7e-51 206.8 253 51.8
Aqoxy2G01954 Aquilegia oxysepala HOM05D007522 ORTHO05D009518 6.0e-51 205.7 237 52.3
Peaxi162Scf00267g00097 Petunia axillaris HOM05D007522 ORTHO05D009518 2.3e-50 203.8 249 48.6
Rhsim02G0189000 Rhododendron simsii HOM05D007522 ORTHO05D009518 2.3e-50 203.8 210 54.8
Cc11_g01290 Coffea canephora HOM05D007522 ORTHO05D009518 3.0e-50 203.4 219 53.0
PSO782G1743 Papaver somniferum HOM05D007522 ORTHO05D009518 1.5e-49 201.1 252 51.2
Migut.A00284 Erythranthe guttata HOM05D007522 ORTHO05D009518 9.6e-49 198.4 242 47.9
Nn8g39310 Nelumbo nucifera HOM05D007522 ORTHO05D009518 1.3e-48 198.0 248 50.0
ATR0083G062 Amborella trichopoda HOM05D007522 ORTHO05D009518 6.3e-48 195.7 251 45.0
ECA233G0736 Erigeron canadensis HOM05D007522 ORTHO05D009518 2.4e-47 193.7 246 46.7
Solyc06g011403.1 Solanum lycopersicum HOM05D007522 ORTHO05D009518 2.4e-47 193.7 241 46.9
Sopen06g006080 Solanum pennellii HOM05D007522 ORTHO05D009518 2.4e-47 193.7 241 47.3
Psat0s1782g0120 Pisum sativum HOM05D007522 ORTHO05D009518 5.3e-47 192.6 209 55.0
Lsat_1_v5_gn_6_22860 Lactuca sativa HOM05D007522 ORTHO05D009518 1.5e-46 191.0 222 50.9
EL10Ac2g02553 Beta vulgaris HOM05D007522 ORTHO05D009518 5.0e-45 186.0 241 46.9
Eucgr.C02843 Eucalyptus grandis HOM05D007522 ORTHO05D009518 3.2e-44 183.3 198 54.0
Eucgr.C02854 Eucalyptus grandis HOM05D007522 ORTHO05D009518 2.7e-43 180.3 211 51.7
Eucgr.L02345 Eucalyptus grandis HOM05D007522 ORTHO05D009518 6.1e-43 179.1 211 51.2
AUR62032367 Chenopodium quinoa HOM05D007522 ORTHO05D009518 8.7e-42 175.3 204 51.0
Dinv30202 Davidia involucrata HOM05D007522 ORTHO05D009518 2.8e-40 170.2 183 54.1
Cpa.g.sc91.26 Carica papaya HOM05D007522 ORTHO05D009518 2.6e-38 163.7 230 46.5
vmacro11126 Vaccinium macrocarpon HOM05D007522 ORTHO05D009518 2.6e-38 163.7 310 39.4
AagrBONN_evm.TU.Sc2ySwM_117.2977 Anthoceros agrestis HOM05D007522 ORTHO05D009518 6.5e-37 159.1 247 41.3
Pp3c10_19840 Physcomitrium patens HOM05D007522 ORTHO05D009518 1.1e-33 148.3 240 39.6
HPP92_008699 Vanilla planifolia HOM05D002348 ORTHO05D002512 4.8e-32 142.9 250 40.8
SalBow8G3415 Salvia bowleyana HOM05D007522 ORTHO05D009518 2.4e-31 140.6 107 63.6
MD08G1138600 Malus domestica HOM05D007522 ORTHO05D009518 3.1e-31 140.2 130 63.1
Mapoly0015s0053 Marchantia polymorpha HOM05D007522 ORTHO05D009518 4.1e-31 139.8 250 36.4
AUR62024852 Chenopodium quinoa HOM05D007522 ORTHO05D009518 1.2e-30 138.3 255 41.6
Haze_21613 Corylus avellana HOM05D007522 ORTHO05D009518 3.4e-30 136.7 224 43.3
CDE02G2364 Ceratophyllum demersum HOM05D007522 ORTHO05D009518 8.5e-29 132.1 268 37.3
Ah.10g025820 Amaranthus hybridus HOM05D007522 ORTHO05D009518 1.1e-28 131.7 149 51.7
MD08G1138500 Malus domestica HOM05D007522 ORTHO05D009518 2.1e-27 127.5 82 81.7
CBR_g51241 Chara braunii HOM05D007522 ORTHO05D009518 1.2e-22 111.7 258 32.2
CBR_g75925 Chara braunii HOM05D007522 ORTHO05D009518 5.2e-18 96.3 127 40.9
Glyma.04G070700 Glycine max HOM05D007522 ORTHO05D009518 8.8e-18 95.5 137 41.6
Glyma.04G070800 Glycine max HOM05D007522 ORTHO05D009518 9.4e-12 75.5 53 67.9
Cfa021321 Carpinus fangiana HOM05D007522 ORTHO05D009518 4.0e-10 70.1 88 47.7
SEGI_07807 Sequoiadendron giganteum HOM05D007522 ORTHO05D009518 7.0e-07 59.3 62 54.8


User provided reference genes

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