Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN24G0137 Fragaria x ananassa HOM05D007112 ORTHO05D008930 4.4e-132 474.6 227 100.0
FvH4_2g17490 Fragaria vesca HOM05D007112 ORTHO05D008930 3.6e-118 428.3 227 90.7
FAN15G3611 Fragaria x ananassa HOM05D007112 ORTHO05D008930 4.3e-111 404.8 227 86.3
RcHm_v2.0_Chr6g0282211 Rosa chinensis HOM05D007112 ORTHO05D008930 1.1e-106 390.2 226 83.2
MD05G1153700 Malus domestica HOM05D007112 ORTHO05D008930 1.6e-86 323.2 233 70.4
Prupe.8G187100 Prunus persica HOM05D007112 ORTHO05D008930 4.5e-84 315.1 240 67.9
Atru.chr6.3529 Acer truncatum HOM05D007112 ORTHO05D008930 9.3e-74 280.8 228 61.8
TAR362G0557 Trochodendron aralioides HOM05D007112 ORTHO05D008930 6.2e-70 268.1 233 58.4
Cfa017735 Carpinus fangiana HOM05D007112 ORTHO05D008930 2.0e-68 263.1 230 59.1
Dinv28792 Davidia involucrata HOM05D007112 ORTHO05D008930 5.5e-66 255.0 224 56.7
Ciclev10016325m.g Citrus clementina HOM05D007112 ORTHO05D008930 7.1e-66 254.6 231 57.1
Duzib133G1446 Durio zibethinus HOM05D007112 ORTHO05D008930 6.1e-65 251.5 233 55.4
VMungo0331G1777 Vigna mungo HOM05D007112 ORTHO05D008930 7.9e-65 251.1 232 53.9
Hma1.2p1_1043F.1_g251280 Hydrangea macrophylla HOM05D007112 ORTHO05D008930 1.8e-64 250.0 232 56.5
arahy.Tifrunner.gnm1.ann1.T2R7SH Arachis hypogaea HOM05D007112 ORTHO05D008930 3.0e-64 249.2 230 55.7
GSVIVG01001529001 Vitis vinifera HOM05D007112 ORTHO05D008930 1.1e-63 247.3 232 56.0
LjContig00389g0002281 Lotus japonicus HOM05D007112 ORTHO05D008930 3.3e-63 245.7 229 53.7
arahy.Tifrunner.gnm1.ann1.X2Q8CL Arachis hypogaea HOM05D007112 ORTHO05D008930 7.4e-63 244.6 230 54.3
Phvul.010G036300 Phaseolus vulgaris HOM05D007112 ORTHO05D008930 1.6e-62 243.4 233 52.4
Gohir.A07G195600 Gossypium hirsutum HOM05D007112 ORTHO05D008930 6.3e-62 241.5 232 53.0
Glyma.07G124300 Glycine max HOM05D007112 ORTHO05D008930 1.1e-61 240.7 230 51.7
TWI36G0064 Tripterygium wilfordii HOM05D007112 ORTHO05D008930 1.4e-61 240.4 226 56.2
Gorai.001G227200 Gossypium raimondii HOM05D007112 ORTHO05D008930 6.9e-61 238.0 234 52.6
Sabra14G0134200 Salix brachista HOM05D007112 ORTHO05D008930 9.0e-61 237.7 233 54.9
Thecc.01G207600 Theobroma cacao HOM05D007112 ORTHO05D008930 1.2e-60 237.3 237 51.9
CARHR082180 Cardamine hirsuta HOM05D007112 ORTHO05D008930 2.0e-60 236.5 225 55.6
QL05p089159 Quercus lobata HOM05D007112 ORTHO05D008930 2.6e-60 236.1 221 56.6
Gohir.D07G202200 Gossypium hirsutum HOM05D007112 ORTHO05D008930 1.0e-59 234.2 234 52.1
Aqoxy5G04050 Aquilegia oxysepala HOM05D007112 ORTHO05D008930 1.7e-59 233.4 224 54.5
Glyma.03G097000 Glycine max HOM05D007112 ORTHO05D008930 1.7e-59 233.4 232 50.9
Medtr8g010140 Medicago truncatula HOM05D007112 ORTHO05D008930 2.2e-59 233.0 226 52.7
COL.COLO4_34270 Corchorus olitorius HOM05D007112 ORTHO05D008930 3.8e-59 232.3 233 51.9
CSS0005940 Camellia sinensis var. sinensis HOM05D007112 ORTHO05D008930 5.0e-59 231.9 224 55.4
Lalb_Chr07g0194661 Lupinus albus HOM05D007112 ORTHO05D008930 5.0e-59 231.9 235 51.9
Oeu013523.1 Olea europaea HOM05D007112 ORTHO05D008930 1.1e-58 230.7 226 51.3
Rhsim01G0247600 Rhododendron simsii HOM05D007112 ORTHO05D008930 1.1e-58 230.7 228 53.9
ClCG09G008370 Citrullus lanatus HOM05D007112 ORTHO05D008930 1.4e-58 230.3 231 52.8
Ca_23159_v3 Cicer arietinum L. HOM05D007112 ORTHO05D008930 1.9e-58 229.9 230 50.9
Psat4g208280 Pisum sativum HOM05D007112 ORTHO05D008930 1.9e-58 229.9 229 52.4
CANSAT01G1474 Cannabis sativa HOM05D007112 ORTHO05D008930 4.2e-58 228.8 245 51.4
Actinidia23803 Actinidia chinensis HOM05D007112 ORTHO05D008930 9.4e-58 227.6 221 55.2
TPR.G17379 Trifolium pratense HOM05D007112 ORTHO05D008930 1.2e-57 227.3 229 53.3
CsaV3_7G026720 Cucumis sativus L. HOM05D007112 ORTHO05D008930 3.6e-57 225.7 230 53.0
THA.LOC104819012 Tarenaya hassleriana HOM05D007112 ORTHO05D008930 6.1e-57 224.9 228 51.8
PSO675G4719 Papaver somniferum HOM05D007112 ORTHO05D008930 2.3e-56 223.0 254 49.6
Migut.D00774 Erythranthe guttata HOM05D007112 ORTHO05D008930 1.5e-55 220.3 225 49.8
SalBow3G4154 Salvia bowleyana HOM05D007112 ORTHO05D008930 1.5e-55 220.3 237 48.5
Aa31LG5G18060 Aethionema arabicum HOM05D007112 ORTHO05D008930 4.3e-55 218.8 232 50.9
Carub.0003s0707 Capsella rubella HOM05D007112 ORTHO05D008930 5.7e-55 218.4 223 53.8
Sp3g06430 Schrenkiella parvula HOM05D007112 ORTHO05D008930 6.3e-54 214.9 223 52.5
MSTRG.18505 Avicennia marina HOM05D007112 ORTHO05D008930 8.2e-54 214.5 229 51.1
Lj2A1111T23 Lonicera japonica HOM05D007112 ORTHO05D008930 1.1e-53 214.2 234 52.1
Sed0011312 Sechium edule HOM05D007112 ORTHO05D008930 1.8e-53 213.4 223 50.2
Thhalv10022158m.g Eutrema salsugineum HOM05D007112 ORTHO05D008930 2.4e-53 213.0 224 52.2
Cc01_g15870 Coffea canephora HOM05D007112 ORTHO05D008930 4.1e-53 212.2 236 47.0
AUR62008068 Chenopodium quinoa HOM05D007112 ORTHO05D008930 1.2e-52 210.7 232 51.7
AT3G07525 Arabidopsis thaliana HOM05D007112 ORTHO05D008930 1.5e-52 210.3 221 49.8
BcaC05g29544 Brassica carinata HOM05D007112 ORTHO05D008930 1.5e-52 210.3 223 50.7
HanXRQChr08g0231791 Helianthus annuus HOM05D007112 ORTHO05D008930 2.0e-52 209.9 220 50.9
PSO732G0401 Papaver somniferum HOM05D007112 ORTHO05D008930 3.4e-52 209.1 254 47.6
Eucgr.K02360 Eucalyptus grandis HOM05D007112 ORTHO05D008930 5.9e-52 208.4 223 50.7
A05p40690 Brassica napus HOM05D007112 ORTHO05D008930 7.7e-52 208.0 223 50.7
AUR62028645 Chenopodium quinoa HOM05D007112 ORTHO05D008930 1.0e-51 207.6 236 50.8
BraA05t22800Z Brassica rapa HOM05D007112 ORTHO05D008930 1.7e-51 206.8 224 50.0
ECA247G2139 Erigeron canadensis HOM05D000092 ORTHO05D008930 1.7e-51 206.8 229 52.0
MBI10_g35388_MAGBIO Magnolia biondii HOM05D007112 ORTHO05D008930 5.0e-51 205.3 256 44.9
PGR044G1116 Punica granatum HOM05D007112 ORTHO05D008930 6.5e-51 204.9 231 49.8
Hund02806 Selenicereus undatus HOM05D007112 ORTHO05D008930 1.1e-50 204.1 236 48.3
vmacro14688 Vaccinium macrocarpon HOM05D007112 ORTHO05D008930 4.2e-50 202.2 205 55.6
BolC5t34634H Brassica oleracea HOM05D007112 ORTHO05D008930 7.2e-50 201.4 224 49.6
SHI30551 Sapria himalayana HOM05D007112 ORTHO05D008930 7.2e-50 201.4 227 48.5
CiPaw.14G038400 Carya illinoinensis HOM05D007112 ORTHO05D008930 9.4e-50 201.1 194 53.6
Lsat_1_v5_gn_9_16901 Lactuca sativa HOM05D007112 ORTHO05D008930 1.2e-49 200.7 215 49.8
Manes.13G056200 Manihot esculenta HOM05D007112 ORTHO05D008930 1.2e-49 200.7 174 59.8
ATR0752G208 Amborella trichopoda HOM05D007112 ORTHO05D008930 1.6e-49 200.3 222 47.7
C05p59800 Brassica napus HOM05D007112 ORTHO05D008930 1.6e-49 200.3 223 50.2
Sc24g0003360 Simmondsia chinensis HOM05D007112 ORTHO05D008930 2.3e-48 196.4 225 46.7
Nitab4.5_0010469g0020 Nicotiana tabacum HOM05D007112 ORTHO05D008930 8.8e-48 194.5 224 44.6
Nitab4.5_0000038g0350 Nicotiana tabacum HOM05D007112 ORTHO05D008930 1.5e-47 193.7 224 44.6
Peaxi162Scf02239g00022 Petunia axillaris HOM05D007112 ORTHO05D008930 4.4e-47 192.2 232 41.8
HPP92_001291 Vanilla planifolia HOM05D007112 ORTHO05D008930 1.3e-46 190.7 211 47.9
Hma1.2p1_1043F.1_g251290 Hydrangea macrophylla HOM05D007112 ORTHO05D008930 2.2e-46 189.9 148 64.2
PGSC0003DMG400021909 Solanum tuberosum HOM05D007112 ORTHO05D008930 2.8e-46 189.5 224 44.6
unitig_60.g25572 Utricularia gibba HOM05D007112 ORTHO05D008930 3.7e-46 189.1 223 45.7
Sopen09g015950 Solanum pennellii HOM05D007112 ORTHO05D008930 4.1e-45 185.7 230 42.2
Solyc09g047840.3 Solanum lycopersicum HOM05D007112 ORTHO05D008930 7.0e-45 184.9 219 45.2
Zm00001eb425740 Zea mays HOM05D007112 ORTHO05D008930 4.5e-44 182.2 217 46.5
Nn7g37436 Nelumbo nucifera HOM05D007112 ORTHO05D008930 2.2e-43 179.9 160 60.0
Ah.11g050810 Amaranthus hybridus HOM05D007112 ORTHO05D008930 2.1e-41 173.3 228 42.5
MELO3C021125.2 Cucumis melo HOM05D007112 ORTHO05D008930 4.7e-41 172.2 181 51.4
Os04g0497350 Oryza sativa ssp. japonica HOM05D007112 ORTHO05D008930 4.4e-39 165.6 213 45.5
CDE05G1497 Ceratophyllum demersum HOM05D007112 ORTHO05D008930 7.5e-39 164.9 173 51.4
CAN.G50.11 Capsicum annuum HOM05D007112 ORTHO05D008930 1.7e-35 153.7 115 59.1
Haze_03375 Corylus avellana HOM05D007112 ORTHO05D008930 3.6e-33 146.0 208 41.8
Pp3c26_2050 Physcomitrium patens HOM05D007112 ORTHO05D008930 8.8e-32 141.4 187 41.2
Mapoly0002s0314 Marchantia polymorpha HOM05D007112 ORTHO05D008930 1.7e-30 137.1 266 31.2
MD10G1148000 Malus domestica HOM05D007112 ORTHO05D008930 1.3e-27 127.5 129 55.0
AagrBONN_evm.TU.Sc2ySwM_344.2017 Anthoceros agrestis HOM05D007112 ORTHO05D008930 2.2e-27 126.7 192 37.5
DCAR_018609 Daucus carota HOM05D007112 ORTHO05D008930 8.5e-27 124.8 166 43.4
HanXRQChr03g0082541 Helianthus annuus HOM05D007112 ORTHO05D008930 2.1e-25 120.2 115 57.4
Cpa.g.sc8.40 Carica papaya HOM05D007112 ORTHO05D008930 1.1e-18 97.8 135 46.7
EL10Ac5g10588 Beta vulgaris HOM05D007112 ORTHO05D008930 1.4e-16 90.9 62 67.7
SMO141G0021 Selaginella moellendorffii HOM05D007112 ORTHO05D008930 7.5e-15 85.1 104 39.4
Haze_03371 Corylus avellana HOM05D007112 ORTHO05D008930 3.7e-14 82.8 98 44.9
Haze_03374 Corylus avellana HOM05D000072 ORTHO05D000026 1.4e-13 80.9 98 45.9
SGA_v2.0_scaffold29G12307 Striga asiatica HOM05D007112 ORTHO05D008930 3.2e-13 79.7 155 38.7
Nn7g37443 Nelumbo nucifera HOM05D007112 ORTHO05D008930 4.1e-13 79.3 64 56.2
CDE05G2169 Ceratophyllum demersum HOM05D007112 ORTHO05D008930 5.4e-13 79.0 129 39.5
EL10Ac5g10586 Beta vulgaris HOM05D007112 ORTHO05D008930 2.3e-11 73.6 84 47.6
TWI18G1453 Tripterygium wilfordii HOM05D007112 ORTHO05D008930 9.5e-10 68.2 97 38.1
Haze_03378 Corylus avellana HOM05D007112 ORTHO05D008930 6.4e-06 55.5 33 69.7


User provided reference genes

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