Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN23G3106 Fragaria x ananassa HOM05D003426 ORTHO05D003816 1.2e-257 892.9 505 100.0
FAN26G0769 Fragaria x ananassa HOM05D003426 ORTHO05D003816 1.6e-227 792.7 507 89.9
FvH4_1g00800 Fragaria vesca HOM05D003426 ORTHO05D003816 3.2e-191 672.2 407 93.4
FAN28G0527 Fragaria x ananassa HOM05D003426 ORTHO05D003816 4.0e-186 655.2 507 74.8
RcHm_v2.0_Chr2g0085511 Rosa chinensis HOM05D003426 ORTHO05D003816 3.5e-174 615.5 499 75.4
MD15G1151400 Malus domestica HOM05D003426 ORTHO05D003816 4.6e-57 226.5 443 39.1
MD02G1006400 Malus domestica HOM05D003426 ORTHO05D003816 3.9e-56 223.4 497 40.4
MD17G1259500 Malus domestica HOM05D003426 ORTHO05D003816 5.0e-43 179.9 443 33.0
Cfa020810 Carpinus fangiana HOM05D003426 ORTHO05D003816 1.1e-39 168.7 465 33.1
Prupe.7G264500 Prunus persica HOM05D003426 ORTHO05D003816 3.3e-39 167.2 373 35.9
Haze_19169 Corylus avellana HOM05D003426 ORTHO05D003816 2.5e-34 151.0 484 30.8
CiPaw.15G166800 Carya illinoinensis HOM05D003426 ORTHO05D003816 1.8e-32 144.8 447 33.8
Potri.006G182601 Populus trichocarpa HOM05D003426 ORTHO05D003816 5.2e-32 143.3 427 32.3
Manes.06G035400 Manihot esculenta HOM05D003426 ORTHO05D003816 2.6e-31 141.0 426 35.4
Thecc.09G028500 Theobroma cacao HOM05D003426 ORTHO05D003816 4.4e-31 140.2 431 33.4
Dinv43256 Davidia involucrata HOM05D003426 ORTHO05D003816 7.5e-31 139.4 430 33.5
Cpa.g.sc46.169 Carica papaya HOM05D003426 ORTHO05D003816 1.3e-30 138.7 427 33.0
TWI34G0373 Tripterygium wilfordii HOM05D003426 ORTHO05D003816 1.3e-30 138.7 458 32.5
COL.COLO4_18823 Corchorus olitorius HOM05D003426 ORTHO05D003816 9.1e-29 132.5 366 33.1
Cc06_g14810 Coffea canephora HOM05D003426 ORTHO05D003816 1.0e-27 129.0 437 29.5
Atru.chr7.23 Acer truncatum HOM05D003426 ORTHO05D003816 3.8e-27 127.1 465 32.0
CiPaw.16G108300 Carya illinoinensis HOM05D003426 ORTHO05D003816 1.5e-26 125.2 488 30.9
Duzib168G0934 Durio zibethinus HOM05D003426 ORTHO05D003816 1.9e-26 124.8 439 31.9
Eucgr.C00251 Eucalyptus grandis HOM05D003426 ORTHO05D003816 6.1e-25 119.8 364 31.3
Dinv42844 Davidia involucrata HOM05D003426 ORTHO05D003816 1.5e-23 115.2 249 36.5
Hma1.2p1_0028F.1_g017630 Hydrangea macrophylla HOM05D003426 ORTHO05D003816 4.4e-23 113.6 415 27.7
Ah.09g228830 Amaranthus hybridus HOM05D006517 ORTHO05D007886 2.8e-22 110.9 381 31.8
AUR62025323 Chenopodium quinoa HOM05D003426 ORTHO05D003816 2.8e-22 110.9 513 26.3
Actinidia23556 Actinidia chinensis HOM05D003426 ORTHO05D003816 3.7e-22 110.5 429 32.2
Sabra06G0139100 Salix brachista HOM05D003426 ORTHO05D003816 1.1e-21 109.0 220 36.8
TAR626G1511 Trochodendron aralioides HOM05D003426 ORTHO05D003816 3.1e-21 107.5 420 27.1
EL10Ac8g18943 Beta vulgaris HOM05D003426 ORTHO05D003816 7.0e-21 106.3 459 28.8
Nn2g12424 Nelumbo nucifera HOM05D003426 ORTHO05D003816 7.0e-21 106.3 450 31.6
MSTRG.26266 Avicennia marina HOM05D003426 ORTHO05D003816 9.1e-21 105.9 358 27.1
Gohir.D07G031500 Gossypium hirsutum HOM05D003426 ORTHO05D003816 2.7e-20 104.4 418 28.0
Gorai.001G032900 Gossypium raimondii HOM05D003426 ORTHO05D003816 3.5e-20 104.0 418 27.8
Manes.14G144800 Manihot esculenta HOM05D003426 ORTHO05D003816 4.5e-20 103.6 419 29.4
Oeu026460.1 Olea europaea HOM05D003426 ORTHO05D003816 7.7e-20 102.8 372 27.4
AUR62028339 Chenopodium quinoa HOM05D003426 ORTHO05D003816 1.0e-19 102.4 515 24.9
Peaxi162Scf00401g00417 Petunia axillaris HOM05D003426 ORTHO05D003816 1.0e-19 102.4 448 27.9
CANSAT11G1136 Cannabis sativa HOM05D003426 ORTHO05D003816 1.7e-19 101.7 421 28.7
Gohir.A07G027500 Gossypium hirsutum HOM05D003426 ORTHO05D003816 3.8e-19 100.5 418 27.8
Hund08921 Selenicereus undatus HOM05D003426 ORTHO05D003816 1.5e-18 98.6 460 30.0
Rhsim01G0028100 Rhododendron simsii HOM05D003426 ORTHO05D003816 2.5e-18 97.8 442 31.7
vmacro16795 Vaccinium macrocarpon HOM05D003426 ORTHO05D003816 2.5e-18 97.8 394 32.2
Lj9C718T11 Lonicera japonica HOM05D003426 ORTHO05D003816 3.2e-18 97.4 445 25.8
CAN.G160.49 Capsicum annuum HOM05D003426 ORTHO05D003816 7.2e-18 96.3 418 28.2
Ca_21135_v3 Cicer arietinum L. HOM05D003426 ORTHO05D003816 1.6e-17 95.1 424 26.9
Ca_21137_v3 Cicer arietinum L. HOM05D003426 ORTHO05D003816 1.6e-17 95.1 424 26.9
Lsat_1_v5_gn_8_63641 Lactuca sativa HOM05D003426 ORTHO05D003816 3.6e-17 94.0 380 27.6
CSS0024837 Camellia sinensis var. sinensis HOM05D003426 ORTHO05D003816 1.4e-16 92.0 222 34.2
PGR142G3879 Punica granatum HOM05D003426 ORTHO05D003816 1.4e-16 92.0 447 26.4
HanXRQChr05g0144001 Helianthus annuus HOM05D003426 ORTHO05D003816 3.0e-16 90.9 370 28.6
Sed0021282 Sechium edule HOM05D003426 ORTHO05D003816 3.0e-16 90.9 417 27.3
PGSC0003DMG400011187 Solanum tuberosum HOM05D003426 ORTHO05D003816 1.5e-15 88.6 426 27.7
Hma1.2p1_2680F.1_g326790 Hydrangea macrophylla HOM05D003426 ORTHO05D003816 2.0e-15 88.2 214 35.5
MSTRG.6152 Avicennia marina HOM05D003426 ORTHO05D003816 2.6e-15 87.8 356 25.8
TAR636G1172 Trochodendron aralioides HOM05D003426 ORTHO05D003816 5.7e-15 86.7 357 29.7
Nitab4.5_0001571g0080 Nicotiana tabacum HOM05D003426 ORTHO05D003816 1.3e-14 85.5 288 30.2
Nn8g39953 Nelumbo nucifera HOM05D003426 ORTHO05D003816 2.2e-14 84.7 436 24.8
Actinidia38667 Actinidia chinensis HOM05D003426 ORTHO05D003816 1.1e-13 82.4 359 31.8
Phvul.003G155200 Phaseolus vulgaris HOM05D003426 ORTHO05D003816 1.1e-13 82.4 463 26.8
Oeu021305.2 Olea europaea HOM05D003426 ORTHO05D003816 1.4e-13 82.0 222 30.6
Solyc07g005700.3 Solanum lycopersicum HOM05D003426 ORTHO05D003816 2.4e-13 81.3 483 25.7
Sopen07g001810 Solanum pennellii HOM05D003426 ORTHO05D003816 4.1e-13 80.5 426 27.5
vmacro06066 Vaccinium macrocarpon HOM05D003426 ORTHO05D003816 5.4e-13 80.1 204 32.4
Glyma.02G205001 Glycine max HOM05D003426 ORTHO05D003816 1.6e-12 78.6 274 28.5
CiPaw.16G108200 Carya illinoinensis HOM05D003426 ORTHO05D003816 2.7e-12 77.8 266 33.1
TAR625G0621 Trochodendron aralioides HOM05D003426 ORTHO05D003816 4.5e-12 77.0 240 34.6
arahy.Tifrunner.gnm1.ann1.N5DK6E Arachis hypogaea HOM05D003426 ORTHO05D003816 7.8e-12 76.3 223 30.9
Lj4g0000658 Lotus japonicus HOM05D003426 ORTHO05D003816 1.3e-11 75.5 387 26.1
Medtr4g130690 Medicago truncatula HOM05D003426 ORTHO05D003816 1.3e-11 75.5 219 30.1
PSO210G2240 Papaver somniferum HOM05D003426 ORTHO05D003816 2.3e-11 74.7 380 25.5
Rhsim03G0257700 Rhododendron simsii HOM05D003426 ORTHO05D003816 3.8e-11 73.9 283 29.7
Aqoxy7G03377 Aquilegia oxysepala HOM05D003426 ORTHO05D003816 5.0e-11 73.6 421 26.4
Nitab4.5_0005869g0080 Nicotiana tabacum HOM05D003426 ORTHO05D003816 6.6e-11 73.2 238 32.4
Lalb_Chr12g0198761 Lupinus albus HOM05D003426 ORTHO05D003816 8.6e-11 72.8 160 34.4
PSO210G1729 Papaver somniferum HOM05D003426 ORTHO05D003816 8.6e-11 72.8 336 27.1
CsaV3_2G007580 Cucumis sativus L. HOM05D003426 ORTHO05D003816 1.1e-10 72.4 277 30.7
QL02p093542 Quercus lobata HOM05D001418 ORTHO05D002038 2.5e-10 71.2 95 40.0
Psat4g009920 Pisum sativum HOM05D003426 ORTHO05D003816 3.3e-10 70.9 416 28.6
Actinidia38316 Actinidia chinensis HOM05D003426 ORTHO05D003816 4.3e-10 70.5 417 28.1
Psat4g009680 Pisum sativum HOM05D003426 ORTHO05D003816 5.6e-10 70.1 294 27.2
SalBow1G0569 Salvia bowleyana HOM05D003426 ORTHO05D003816 7.3e-10 69.7 385 27.3
Medtr4g129690 Medicago truncatula HOM05D003426 ORTHO05D003816 1.6e-09 68.6 272 25.0
THA.LOC104803917 Tarenaya hassleriana HOM05D003426 ORTHO05D003816 1.6e-09 68.6 554 24.4
MBI14_g30955_MAGBIO Magnolia biondii HOM05D003426 ORTHO05D003816 2.1e-09 68.2 412 27.2
arahy.Tifrunner.gnm1.ann1.H6N2T4 Arachis hypogaea HOM05D003426 ORTHO05D003816 2.8e-09 67.8 231 28.1
Glyma.17G184200 Glycine max HOM05D003426 ORTHO05D003816 4.7e-09 67.0 421 27.3
MBI15_g18232_MAGBIO Magnolia biondii HOM05D003426 ORTHO05D003816 4.7e-09 67.0 477 24.1
Glyma.17G072900 Glycine max HOM05D003426 ORTHO05D003816 6.1e-09 66.6 422 23.2
Glyma.17G073000 Glycine max HOM05D003426 ORTHO05D003816 6.1e-09 66.6 365 24.7
ClCG02G014420 Citrullus lanatus HOM05D003426 ORTHO05D003816 8.0e-09 66.2 425 24.2
MELO3C004128.2 Cucumis melo HOM05D003426 ORTHO05D003816 8.0e-09 66.2 279 29.4
Psat4g010040 Pisum sativum HOM05D003426 ORTHO05D003816 1.0e-08 65.9 179 33.5
Glyma.17G072650 Glycine max HOM05D003426 ORTHO05D003816 8.9e-08 62.8 270 25.2
Sed0007563 Sechium edule HOM05D003426 ORTHO05D003816 8.9e-08 62.8 219 25.6
QL02p093534 Quercus lobata HOM05D003426 ORTHO05D003816 1.2e-07 62.4 204 33.3
PGSC0003DMG400037110 Solanum tuberosum HOM05D003426 ORTHO05D003816 2.0e-07 61.6 226 26.5
PGSC0003DMG400040160 Solanum tuberosum HOM05D003426 ORTHO05D003816 2.6e-07 61.2 344 31.1
Migut.J01365 Erythranthe guttata HOM05D003426 ORTHO05D003816 3.4e-07 60.8 354 27.4
Lj7P460T26 Lonicera japonica HOM05D003426 ORTHO05D003816 3.4e-07 60.8 217 29.5
PSO111G0039 Papaver somniferum HOM05D003426 ORTHO05D003816 4.4e-07 60.5 420 27.9
Lj4g0006994 Lotus japonicus HOM05D003426 ORTHO05D003816 7.5e-07 59.7 383 25.3
Nitab4.5_0000123g0610 Nicotiana tabacum HOM05D003426 ORTHO05D007302 7.5e-07 59.7 220 28.2
Dinv08190 Davidia involucrata HOM05D003426 ORTHO05D003816 9.8e-07 59.3 353 26.1
PSO561G0041 Papaver somniferum HOM05D003426 ORTHO05D003816 9.8e-07 59.3 303 31.7
Nitab4.5_0004586g0030 Nicotiana tabacum HOM05D000650 ORTHO05D007302 1.3e-06 58.9 188 26.6
Cpa.g.sc20.26 Carica papaya HOM05D000650 ORTHO05D000735 2.2e-06 58.2 272 25.7
Prupe.8G073000 Prunus persica HOM05D000650 ORTHO05D007302 2.9e-06 57.8 180 28.3
Sc14g0000930 Simmondsia chinensis HOM05D003426 ORTHO05D003816 2.9e-06 57.8 387 26.9
ECA236G2514 Erigeron canadensis HOM05D003426 ORTHO05D003816 3.7e-06 57.4 465 22.8
Medtr3g045840 Medicago truncatula HOM05D003426 ORTHO05D003816 3.7e-06 57.4 230 29.6
QL02p093555 Quercus lobata HOM05D003426 ORTHO05D003816 3.7e-06 57.4 212 31.6
MELO3C010212.2 Cucumis melo HOM05D003426 ORTHO05D003816 4.9e-06 57.0 227 26.9
RcHm_v2.0_Chr6g0270151 Rosa chinensis HOM05D000650 ORTHO05D007302 6.4e-06 56.6 187 28.9
Hund02984 Selenicereus undatus HOM05D016866 ORTHO05D015160 6.4e-06 56.6 185 26.5
VMungo1215G0444 Vigna mungo HOM05D003426 ORTHO05D003816 6.4e-06 56.6 210 25.7
Psat6g228520 Pisum sativum HOM05D003426 ORTHO05D003816 8.3e-06 56.2 294 27.6
GSVIVG01000328001 Vitis vinifera HOM05D000650 ORTHO05D007302 8.3e-06 56.2 198 26.8


User provided reference genes

Program Settings