Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN23G2983 Fragaria x ananassa HOM05D007735 ORTHO05D009638 1.8e-66 255.8 130 100.0
FAN26G0974 Fragaria x ananassa HOM05D007735 ORTHO05D009638 9.1e-66 253.4 130 99.2
FAN23G3070 Fragaria x ananassa HOM05D007735 ORTHO05D009638 2.0e-60 235.7 139 88.5
FvH4_1g09950 Fragaria vesca HOM05D007735 ORTHO05D009638 1.9e-47 192.6 108 91.7
FAN19G1654 Fragaria x ananassa HOM05D007735 ORTHO05D009638 1.9e-47 192.6 108 91.7
FAN28G1635 Fragaria x ananassa HOM05D007735 ORTHO05D009638 1.0e-45 186.8 109 90.8
RcHm_v2.0_Chr2g0096741 Rosa chinensis HOM05D007735 ORTHO05D009638 5.4e-42 174.5 107 85.0
Prupe.7G187700 Prunus persica HOM05D007735 ORTHO05D009638 6.2e-22 107.8 127 56.7
CSS0016261 Camellia sinensis var. sinensis HOM05D007735 ORTHO05D009638 5.8e-20 101.3 110 50.9
Cfa007115 Carpinus fangiana HOM05D007735 ORTHO05D009638 3.2e-18 95.5 127 50.4
ECA246G0225 Erigeron canadensis HOM05D007735 ORTHO05D009638 2.1e-17 92.8 109 52.3
TAR381G1223 Trochodendron aralioides HOM05D007735 ORTHO05D009638 7.8e-17 90.9 115 52.2
QL06p053348 Quercus lobata HOM05D007735 ORTHO05D009638 1.0e-16 90.5 124 50.8
Nn5g31061 Nelumbo nucifera HOM05D007735 ORTHO05D009638 1.9e-15 86.3 111 55.9
Glyma.16G114400 Glycine max HOM05D007735 ORTHO05D009638 4.3e-15 85.1 124 45.2
Manes.01G157700 Manihot esculenta HOM05D007735 ORTHO05D009638 4.3e-15 85.1 117 47.0
Glyma.09G195900 Glycine max HOM05D007735 ORTHO05D009638 9.6e-15 84.0 125 44.8
Thecc.01G001800 Theobroma cacao HOM05D007735 ORTHO05D009638 9.6e-15 84.0 126 50.8
Lsat_1_v5_gn_2_74220 Lactuca sativa HOM05D007735 ORTHO05D009638 3.6e-14 82.0 110 51.8
Lsat_1_v5_gn_3_69161 Lactuca sativa HOM05D007735 ORTHO05D009638 4.8e-14 81.6 109 52.3
TPR.G19311 Trifolium pratense HOM05D007735 ORTHO05D009638 4.8e-14 81.6 116 49.1
CSS0025501 Camellia sinensis var. sinensis HOM05D007735 ORTHO05D009638 6.2e-14 81.3 119 47.9
Phvul.002G119100 Phaseolus vulgaris HOM05D007735 ORTHO05D009638 6.2e-14 81.3 123 45.5
Potri.011G145200 Populus trichocarpa HOM05D007735 ORTHO05D009638 6.2e-14 81.3 125 47.2
VMungo1215G0699 Vigna mungo HOM05D007735 ORTHO05D009638 6.2e-14 81.3 124 45.2
Cc07_g12240 Coffea canephora HOM05D007735 ORTHO05D009638 8.1e-14 80.9 128 41.4
Glyma.01G156500 Glycine max HOM05D007735 ORTHO05D009638 8.1e-14 80.9 123 45.5
LjContig00247g0020335 Lotus japonicus HOM05D007735 ORTHO05D009638 8.1e-14 80.9 125 47.2
DCAR_014121 Daucus carota HOM05D007735 ORTHO05D009638 1.1e-13 80.5 111 51.4
DCAR_014122 Daucus carota HOM05D007735 ORTHO05D009638 1.1e-13 80.5 111 51.4
Lalb_Chr09g0324871 Lupinus albus HOM05D007735 ORTHO05D009638 1.4e-13 80.1 120 42.5
Potri.001G456700 Populus trichocarpa HOM05D007735 ORTHO05D009638 4.0e-13 78.6 105 51.4
Sabra11G0130300 Salix brachista HOM05D007735 ORTHO05D009638 6.9e-13 77.8 126 45.2
Manes.02G117000 Manihot esculenta HOM05D007735 ORTHO05D009638 9.0e-13 77.4 108 46.3
Sabra16G0309000 Salix brachista HOM05D007735 ORTHO05D009638 9.0e-13 77.4 110 50.9
Glyma.11G088300 Glycine max HOM05D007735 ORTHO05D009638 1.2e-12 77.0 124 45.2
Oeu045753.2 Olea europaea HOM05D007735 ORTHO05D009638 1.5e-12 76.6 121 42.1
Solyc02g082240.1 Solanum lycopersicum HOM05D007735 ORTHO05D009638 3.4e-12 75.5 126 45.2
CsaV3_3G000130 Cucumis sativus L. HOM05D007735 ORTHO05D009638 4.4e-12 75.1 110 44.5
CsaV3_UNG155170 Cucumis sativus L. HOM05D007735 ORTHO05D009638 4.4e-12 75.1 110 44.5
Lsat_1_v5_gn_8_114121 Lactuca sativa HOM05D007735 ORTHO05D009638 4.4e-12 75.1 113 47.8
Medtr8g072610 Medicago truncatula HOM05D007735 ORTHO05D009638 4.4e-12 75.1 116 49.1
PGSC0003DMG400013637 Solanum tuberosum HOM05D007735 ORTHO05D009638 4.4e-12 75.1 125 42.4
Peaxi162Scf00918g00052 Petunia axillaris HOM05D007735 ORTHO05D009638 5.8e-12 74.7 121 47.1
Sopen02g026900 Solanum pennellii HOM05D007735 ORTHO05D009638 9.9e-12 73.9 125 44.0
Eucgr.J02566 Eucalyptus grandis HOM05D007735 ORTHO05D009638 1.3e-11 73.6 148 40.5
Sc03g0004120 Simmondsia chinensis HOM05D007735 ORTHO05D009638 1.3e-11 73.6 114 47.4
CiPaw.07G000500 Carya illinoinensis HOM05D007735 ORTHO05D009638 1.7e-11 73.2 111 48.6
Eucgr.I02199 Eucalyptus grandis HOM05D007735 ORTHO05D009638 6.4e-11 71.2 141 38.3
Lsat_1_v5_gn_8_114101 Lactuca sativa HOM05D007735 ORTHO05D009638 6.4e-11 71.2 115 47.0
Lalb_Chr16g0380221 Lupinus albus HOM05D007735 ORTHO05D009638 6.4e-11 71.2 122 41.0
VMungo0251G0553 Vigna mungo HOM05D007735 ORTHO05D009638 6.4e-11 71.2 113 46.0
Oeu043409.2 Olea europaea HOM05D007735 ORTHO05D009638 8.4e-11 70.9 123 39.8
Sed0019252 Sechium edule HOM05D007735 ORTHO05D009638 8.4e-11 70.9 109 45.0
Nitab4.5_0000855g0160 Nicotiana tabacum HOM05D007735 ORTHO05D009638 1.1e-10 70.5 118 46.6
MELO3C013706.2 Cucumis melo HOM05D007735 ORTHO05D009638 1.4e-10 70.1 110 43.6
PGSC0003DMG400018690 Solanum tuberosum HOM05D007735 ORTHO05D009638 1.4e-10 70.1 114 42.1
Nitab4.5_0004448g0030 Nicotiana tabacum HOM05D007735 ORTHO05D009638 2.4e-10 69.3 123 48.8
Nitab4.5_0006309g0010 Nicotiana tabacum HOM05D007735 ORTHO05D009638 2.4e-10 69.3 112 45.5
Aqoxy6G03024 Aquilegia oxysepala HOM05D007735 ORTHO05D009638 3.2e-10 68.9 115 43.5
Psat4g107200 Pisum sativum HOM05D007735 ORTHO05D009638 5.4e-10 68.2 114 46.5
Lalb_Chr05g0229481 Lupinus albus HOM05D007735 ORTHO05D009638 2.7e-09 65.9 108 42.6
Phvul.003G272000 Phaseolus vulgaris HOM05D007735 ORTHO05D009638 6.0e-09 64.7 114 43.0
Nn6g31607 Nelumbo nucifera HOM05D007735 ORTHO05D009638 7.8e-09 64.3 119 40.3
Medtr5g024910 Medicago truncatula HOM05D007735 ORTHO05D009638 1.0e-08 63.9 128 38.3
Ca_25020_v3 Cicer arietinum L. HOM05D007735 ORTHO05D009638 1.3e-08 63.5 125 41.6
Gohir.A05G393900 Gossypium hirsutum HOM05D007735 ORTHO05D009638 3.9e-08 62.0 115 42.6
Gorai.012G025100 Gossypium raimondii HOM05D007735 ORTHO05D009638 5.1e-08 61.6 112 41.1
Psat2g147360 Pisum sativum HOM05D007735 ORTHO05D009638 5.1e-08 61.6 131 38.2
CiPaw.07G132500 Carya illinoinensis HOM05D007735 ORTHO05D009638 6.6e-08 61.2 114 39.5
Lalb_Chr05g0214991 Lupinus albus HOM05D007735 ORTHO05D009638 6.6e-08 61.2 104 41.3
Lj2g0017807 Lotus japonicus HOM05D007735 ORTHO05D009638 1.1e-07 60.5 127 41.7
Haze_22869 Corylus avellana HOM05D007735 ORTHO05D009638 1.5e-07 60.1 121 39.7
TPR.G33757 Trifolium pratense HOM05D001957 ORTHO05D002015 1.5e-07 60.1 128 37.5
Gohir.D04G020900 Gossypium hirsutum HOM05D007735 ORTHO05D009638 1.9e-07 59.7 115 41.7
SGA_v2.0_scaffold108G30951 Striga asiatica HOM05D007735 ORTHO05D009638 5.6e-07 58.2 103 42.7
SGA_v2.0_scaffold2G00933 Striga asiatica HOM05D007735 ORTHO05D009638 9.6e-07 57.4 120 39.2
COL.COLO4_22568 Corchorus olitorius HOM05D007735 ORTHO05D009638 3.6e-06 55.5 111 40.5
ClCG10G000110 Citrullus lanatus HOM05D007735 ORTHO05D009638 6.2e-06 54.7 109 41.3


User provided reference genes

Program Settings