Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN23G2942 Fragaria x ananassa HOM05D001468 ORTHO05D205010 1.4e-144 516.2 249 100.0
FAN23G1581 Fragaria x ananassa HOM05D001468 ORTHO05D001404 2.6e-21 106.7 132 50.8
FAN26G1912 Fragaria x ananassa HOM05D001468 ORTHO05D001404 1.4e-19 100.9 110 54.5
FAN26G2859 Fragaria x ananassa HOM05D001468 ORTHO05D001404 2.5e-19 100.1 110 54.5
RcHm_v2.0_Chr2g0094041 Rosa chinensis HOM05D001468 ORTHO05D001404 6.1e-18 95.5 132 47.0
FvH4_1g08000 Fragaria vesca HOM05D001468 ORTHO05D001404 1.8e-17 94.0 110 50.9
FAN19G1804 Fragaria x ananassa HOM05D001468 ORTHO05D001404 2.6e-16 90.1 110 50.0
MD15G1211900 Malus domestica HOM05D001468 ORTHO05D001404 1.7e-15 87.4 102 49.0
MD02G1084500 Malus domestica HOM05D001468 ORTHO05D001404 5.3e-14 82.4 101 47.5
Thecc.09G083600 Theobroma cacao HOM05D001468 ORTHO05D001404 1.6e-13 80.9 122 40.2
Prupe.7G204900 Prunus persica HOM05D001468 ORTHO05D001404 1.0e-12 78.2 102 46.1
QL02p061858 Quercus lobata HOM05D001468 ORTHO05D001404 3.8e-12 76.3 102 45.1
Glyma.13G106700 Glycine max HOM05D001468 ORTHO05D001404 6.5e-12 75.5 94 46.8
Haze_25947 Corylus avellana HOM05D001468 ORTHO05D001404 1.9e-11 73.9 102 45.1
Dinv42346 Davidia involucrata HOM05D001468 ORTHO05D001404 2.5e-11 73.6 85 45.9
GSVIVG01015158001 Vitis vinifera HOM05D001468 ORTHO05D001404 2.5e-11 73.6 101 42.6
Phvul.003G134300 Phaseolus vulgaris HOM05D001468 ORTHO05D001404 4.2e-11 72.8 94 46.8
Glyma.17G052600 Glycine max HOM05D001468 ORTHO05D001404 5.5e-11 72.4 94 45.7
CiPaw.04G147500 Carya illinoinensis HOM05D001468 ORTHO05D001404 9.4e-11 71.6 101 42.6
Manes.16G099400 Manihot esculenta HOM05D001468 ORTHO05D001404 9.4e-11 71.6 114 41.2
Manes.03G036800 Manihot esculenta HOM05D001468 ORTHO05D001404 1.2e-10 71.2 114 41.2
TPR.G9459 Trifolium pratense HOM05D001468 ORTHO05D001404 1.2e-10 71.2 94 45.7
DCAR_028279 Daucus carota HOM05D001468 ORTHO05D001404 2.1e-10 70.5 100 41.0
Lalb_Chr12g0199931 Lupinus albus HOM05D001468 ORTHO05D001404 2.1e-10 70.5 95 42.1
CiPaw.03G211600 Carya illinoinensis HOM05D001468 ORTHO05D001404 2.7e-10 70.1 102 43.1
Medtr4g125820 Medicago truncatula HOM05D001468 ORTHO05D001404 3.6e-10 69.7 94 45.7
TWI32G1015 Tripterygium wilfordii HOM05D001468 ORTHO05D001404 3.6e-10 69.7 102 44.1
Gohir.A06G074000 Gossypium hirsutum HOM05D001468 ORTHO05D001404 4.7e-10 69.3 124 37.1
Ciclev10007265m.g Citrus clementina HOM05D001468 ORTHO05D001404 6.1e-10 68.9 103 41.7
Gohir.D06G072900 Gossypium hirsutum HOM05D001468 ORTHO05D001404 6.1e-10 68.9 124 37.1
Gohir.D07G012700 Gossypium hirsutum HOM05D001468 ORTHO05D001404 6.1e-10 68.9 124 36.3
Gorai.001G013400 Gossypium raimondii HOM05D001468 ORTHO05D001404 6.1e-10 68.9 124 36.3
Gorai.010G084900 Gossypium raimondii HOM05D001468 ORTHO05D001404 6.1e-10 68.9 124 37.1
Psat4g016560 Pisum sativum HOM05D001468 ORTHO05D001404 8.0e-10 68.6 94 44.7
Duzib168G0030 Durio zibethinus HOM05D001468 ORTHO05D001404 1.0e-09 68.2 128 35.9
Lj4A289G12 Lonicera japonica HOM05D001468 ORTHO05D001404 1.4e-09 67.8 103 40.8
Gohir.A07G012900 Gossypium hirsutum HOM05D001468 ORTHO05D001404 1.8e-09 67.4 124 35.5
ClCG03G015370 Citrullus lanatus HOM05D001468 ORTHO05D001404 2.3e-09 67.0 141 34.8
Gorai.009G033700 Gossypium raimondii HOM05D001468 ORTHO05D001404 3.0e-09 66.6 102 40.2
Lj6g0000184 Lotus japonicus HOM05D001468 ORTHO05D001404 4.0e-09 66.2 94 41.5
Ca_21299_v3 Cicer arietinum L. HOM05D001468 ORTHO05D001404 5.2e-09 65.9 96 43.8
CsaV3_1G040680 Cucumis sativus L. HOM05D001468 ORTHO05D001404 5.2e-09 65.9 140 34.3
VMungo1215G1996 Vigna mungo HOM05D001468 ORTHO05D001404 5.2e-09 65.9 118 39.0
DCAR_011960 Daucus carota HOM05D001468 ORTHO05D001404 6.7e-09 65.5 129 34.1
Glyma.15G172400 Glycine max HOM05D001468 ORTHO05D001404 6.7e-09 65.5 94 42.6
VMungo1309G1942 Vigna mungo HOM05D001468 ORTHO05D001404 6.7e-09 65.5 94 41.5
Gohir.A05G031800 Gossypium hirsutum HOM05D001468 ORTHO05D001404 1.2e-08 64.7 101 41.6
CSS0011313 Camellia sinensis var. sinensis HOM05D001468 ORTHO05D001404 1.5e-08 64.3 84 45.2
Glyma.09G066400 Glycine max HOM05D001468 ORTHO05D001404 2.6e-08 63.5 94 41.5
Medtr2g040470 Medicago truncatula HOM05D001468 ORTHO05D001404 2.6e-08 63.5 98 40.8
Potri.006G146600 Populus trichocarpa HOM05D001468 ORTHO05D001404 2.6e-08 63.5 101 40.6
Atru.chr7.1642_Atru.chr7.1643 Acer truncatum HOM05D001468 ORTHO05D001404 3.3e-08 63.2 120 35.8
Phvul.009G230000 Phaseolus vulgaris HOM05D001468 ORTHO05D001404 3.3e-08 63.2 94 40.4
Actinidia25237 Actinidia chinensis HOM05D001468 ORTHO05D001404 5.7e-08 62.4 102 39.2
Psat1g131600 Pisum sativum HOM05D001468 ORTHO05D001404 5.7e-08 62.4 98 40.8
Thhalv10024244m.g Eutrema salsugineum HOM05D001468 ORTHO05D001404 7.5e-08 62.0 102 38.2
Lj4g0027157 Lotus japonicus HOM05D001468 ORTHO05D001404 7.5e-08 62.0 94 41.5
Sabra06G0115800 Salix brachista HOM05D001468 ORTHO05D001404 7.5e-08 62.0 100 41.0
Ca_13136_v3 Cicer arietinum L. HOM05D001468 ORTHO05D001404 9.7e-08 61.6 98 39.8
TPR.G18103 Trifolium pratense HOM05D001468 ORTHO05D001404 9.7e-08 61.6 98 39.8
TWI63G0274 Tripterygium wilfordii HOM05D001468 ORTHO05D001404 9.7e-08 61.6 102 41.2
TAR413G0009 Trochodendron aralioides HOM05D001468 ORTHO05D001404 9.7e-08 61.6 109 34.9
CAN.G147.1 Capsicum annuum HOM05D001468 ORTHO05D001404 1.3e-07 61.2 99 37.4
Sc08g0008640 Simmondsia chinensis HOM05D001468 ORTHO05D001404 1.3e-07 61.2 96 39.6
Actinidia39703 Actinidia chinensis HOM05D001468 ORTHO05D001404 1.7e-07 60.8 86 41.9
Aa31LG2G20750 Aethionema arabicum HOM05D001468 ORTHO05D001404 3.7e-07 59.7 84 41.7
AT2G19390 Arabidopsis thaliana HOM05D001468 ORTHO05D001404 3.7e-07 59.7 103 39.8
AT4G29790 Arabidopsis thaliana HOM05D001468 ORTHO05D001404 3.7e-07 59.7 84 41.7
MELO3C015496.2 Cucumis melo HOM05D001468 ORTHO05D001404 3.7e-07 59.7 140 33.6
Sp7g27600 Schrenkiella parvula HOM05D001468 ORTHO05D001404 4.8e-07 59.3 84 40.5
ECA240G2936 Erigeron canadensis HOM05D001468 ORTHO05D001404 8.2e-07 58.5 132 33.3
Peaxi162Scf00724g00116 Petunia axillaris HOM05D001468 ORTHO05D001404 8.2e-07 58.5 148 32.4
Carub.0004s1484 Capsella rubella HOM05D001468 ORTHO05D001404 1.1e-06 58.2 84 39.3
BcaC09g51756 Brassica carinata HOM05D001468 ORTHO05D001404 1.4e-06 57.8 84 39.3
HanXRQChr04g0126081 Helianthus annuus HOM05D001468 ORTHO05D001404 1.4e-06 57.8 100 37.0
Lj7C680G13 Lonicera japonica HOM05D001468 ORTHO05D001404 1.4e-06 57.8 81 42.0
Nitab4.5_0001519g0190 Nicotiana tabacum HOM05D001468 ORTHO05D001404 1.4e-06 57.8 100 37.0
Eucgr.C00851 Eucalyptus grandis HOM05D001468 ORTHO05D001404 1.8e-06 57.4 97 38.1
AL7G22460 Arabidopsis lyrata HOM05D001468 ORTHO05D001404 2.4e-06 57.0 83 41.0
Carub.0003s3365 Capsella rubella HOM05D001468 ORTHO05D001404 2.4e-06 57.0 83 42.2
Lalb_Chr11g0074481 Lupinus albus HOM05D001468 ORTHO05D001404 2.4e-06 57.0 86 37.2
Solyc07g040980.3 Solanum lycopersicum HOM05D001468 ORTHO05D001404 2.4e-06 57.0 99 36.4
BcaB03g14391 Brassica carinata HOM05D001468 ORTHO05D001404 3.1e-06 56.6 84 41.7
ECA236G0261 Erigeron canadensis HOM05D001468 ORTHO05D001404 3.1e-06 56.6 99 38.4
BcaB08g34859 Brassica carinata HOM05D001468 ORTHO05D001404 4.1e-06 56.2 83 41.0
Sp3g32770 Schrenkiella parvula HOM05D001468 ORTHO05D001404 4.1e-06 56.2 103 37.9
AL3G48930 Arabidopsis lyrata HOM05D001468 ORTHO05D001404 5.3e-06 55.8 103 37.9
Lsat_1_v5_gn_7_34640 Lactuca sativa HOM05D001468 ORTHO05D001404 7.0e-06 55.5 99 37.4
Lalb_Chr08g0232421 Lupinus albus HOM05D001468 ORTHO05D001404 7.0e-06 55.5 94 35.1
THA.LOC104820016 Tarenaya hassleriana HOM05D001468 ORTHO05D001404 7.0e-06 55.5 83 39.8
CARHR237690 Cardamine hirsuta HOM05D001468 ORTHO05D001404 9.1e-06 55.1 102 38.2
Lalb_Chr07g0180961 Lupinus albus HOM05D001468 ORTHO05D001404 9.1e-06 55.1 95 37.9


User provided reference genes

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