Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN03G2993 Fragaria x ananassa HOM05D012798 ORTHO05D000039 3.5e-79 298.1 140 100.0
FAN23G0894 Fragaria x ananassa HOM05D012798 ORTHO05D000039 3.5e-79 298.1 140 100.0
FAN23G2789 Fragaria x ananassa HOM05D012798 ORTHO05D000039 3.5e-79 298.1 140 100.0
FAN03G0839 Fragaria x ananassa HOM05D012798 ORTHO05D000039 2.5e-77 292.0 140 98.6
FAN23G2143 Fragaria x ananassa HOM05D012798 ORTHO05D000039 3.5e-55 218.4 131 83.2
FAN23G1271 Fragaria x ananassa HOM05D012798 ORTHO05D000039 7.1e-40 167.5 114 78.1
FAN23G0231 Fragaria x ananassa HOM05D000007 ORTHO05D000039 7.4e-29 131.0 149 51.0
RcHm_v2.0_Chr2g0095711 Rosa chinensis HOM05D000007 ORTHO05D000039 2.1e-28 129.4 150 50.0
FAN19G0311 Fragaria x ananassa HOM05D012798 ORTHO05D000039 3.6e-28 128.6 150 53.3
FvH4_1g10030 Fragaria vesca HOM05D000007 ORTHO05D000039 1.4e-27 126.7 149 51.7
FvH4_1g10050 Fragaria vesca HOM05D000007 ORTHO05D000039 1.4e-27 126.7 149 51.0
RcHm_v2.0_Chr2g0096811 Rosa chinensis HOM05D000007 ORTHO05D000039 1.2e-26 123.6 149 45.6
FAN23G1147 Fragaria x ananassa HOM05D012798 ORTHO05D000039 7.1e-24 114.4 131 51.1
FvH4_1g10020 Fragaria vesca HOM05D012798 ORTHO05D000039 1.0e-17 94.0 152 40.8
Lj1g0004080 Lotus japonicus HOM05D000007 ORTHO05D000039 3.8e-09 65.5 124 33.1
TPR.G29063 Trifolium pratense HOM05D000007 ORTHO05D000039 6.5e-09 64.7 114 34.2
Glyma.19G081500 Glycine max HOM05D000007 ORTHO05D000039 1.1e-08 63.9 130 35.4
Lj1g0007805 Lotus japonicus HOM05D000007 ORTHO05D000039 1.9e-08 63.2 151 35.1
Glyma.16G063500 Glycine max HOM05D000007 ORTHO05D000039 2.5e-08 62.8 111 33.3
Lj1g0005950 Lotus japonicus HOM05D000007 ORTHO05D000039 2.5e-08 62.8 136 32.4
Medtr5g048160 Medicago truncatula HOM05D000007 ORTHO05D000039 4.2e-08 62.0 139 32.4
QL07p003496 Quercus lobata HOM05D000007 ORTHO05D000039 5.5e-08 61.6 150 26.7
Medtr0115s0020 Medicago truncatula HOM05D000007 ORTHO05D000039 7.2e-08 61.2 139 35.3
MD17G1023400 Malus domestica HOM05D000007 ORTHO05D000039 9.3e-08 60.8 140 33.6
Glyma.16G063600 Glycine max HOM05D000007 ORTHO05D000039 1.2e-07 60.5 130 34.6
Lj1g0001431 Lotus japonicus HOM05D000007 ORTHO05D000039 1.6e-07 60.1 152 30.9
arahy.Tifrunner.gnm1.ann1.L34NFV Arachis hypogaea HOM05D000007 ORTHO05D000039 6.1e-07 58.2 113 32.7
Medtr0064s0160 Medicago truncatula HOM05D000007 ORTHO05D000039 6.1e-07 58.2 139 30.9
Lj7C597G11 Lonicera japonica HOM05D000007 ORTHO05D000039 7.9e-07 57.8 149 30.2
VMungo1383G2008 Vigna mungo HOM05D000007 ORTHO05D000039 7.9e-07 57.8 107 33.6
Cfa007609 Carpinus fangiana HOM05D000007 ORTHO05D000039 1.0e-06 57.4 157 30.6
Hma1.2p1_1837F.1_g304820 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 1.0e-06 57.4 131 29.8
CAN.G294.25 Capsicum annuum HOM05D000007 ORTHO05D000521 1.8e-06 56.6 93 34.4
COL.COLO4_14558 Corchorus olitorius HOM05D000007 ORTHO05D000039 2.3e-06 56.2 127 33.9
Glyma.19G081700 Glycine max HOM05D000007 ORTHO05D000039 2.3e-06 56.2 113 30.1
Lju41C15T0 Lonicera japonica HOM05D000007 ORTHO05D000039 3.0e-06 55.8 157 32.5
Cfa007545 Carpinus fangiana HOM05D000007 ORTHO05D000039 3.9e-06 55.5 156 30.8
Haze_04397 Corylus avellana HOM05D000007 ORTHO05D000039 3.9e-06 55.5 152 29.6
Lalb_Chr10g0092101 Lupinus albus HOM05D000007 ORTHO05D000039 3.9e-06 55.5 132 30.3
QL07p003322 Quercus lobata HOM05D000007 ORTHO05D000039 3.9e-06 55.5 149 24.2
MD03G1027800 Malus domestica HOM05D000007 ORTHO05D000039 5.1e-06 55.1 95 32.6
Manes.03G115800 Manihot esculenta HOM05D000007 ORTHO05D000039 5.1e-06 55.1 94 31.9
GSVIVG01013506001 Vitis vinifera HOM05D000007 ORTHO05D000039 5.1e-06 55.1 91 38.5
Lj1g0023224 Lotus japonicus HOM05D000007 ORTHO05D000039 6.7e-06 54.7 124 29.8


User provided reference genes

Program Settings