Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN23G2725 Fragaria x ananassa HOM05D005407 ORTHO05D006544 1.7e-181 639.4 369 100.0
FvH4_1g17130 Fragaria vesca HOM05D005407 ORTHO05D006544 5.2e-167 591.3 370 94.9
FAN19G1545 Fragaria x ananassa HOM05D005407 ORTHO05D006544 3.4e-166 588.6 370 94.6
FAN26G3453 Fragaria x ananassa HOM05D005407 ORTHO05D006544 1.7e-165 586.3 370 94.3
FAN28G2899 Fragaria x ananassa HOM05D005407 ORTHO05D006544 7.8e-163 577.4 370 92.7
RcHm_v2.0_Chr2g0107301 Rosa chinensis HOM05D005407 ORTHO05D006544 1.7e-117 426.8 371 74.7
MD15G1292600 Malus domestica HOM05D005407 ORTHO05D006544 7.3e-44 182.2 386 44.0
Prupe.6G224800 Prunus persica HOM05D005407 ORTHO05D006544 2.6e-41 173.7 332 48.8
MD02G1181700 Malus domestica HOM05D005407 ORTHO05D006544 4.9e-40 169.5 410 43.9
Nn5g30501 Nelumbo nucifera HOM05D005407 ORTHO05D006544 6.4e-32 142.5 373 37.3
Ciclev10025829m.g Citrus clementina HOM05D005407 ORTHO05D006544 3.2e-31 140.2 392 37.0
Gohir.A11G217700 Gossypium hirsutum HOM05D005407 ORTHO05D006544 5.4e-31 139.4 372 35.8
CANSAT01G3084 Cannabis sativa HOM05D005407 ORTHO05D006544 9.3e-31 138.7 399 36.1
Dinv26896 Davidia involucrata HOM05D005407 ORTHO05D006544 1.6e-30 137.9 380 36.3
Cpa.g.sc6.55 Carica papaya HOM05D005407 ORTHO05D006544 7.9e-30 135.6 360 41.7
Gorai.007G220900 Gossypium raimondii HOM05D005407 ORTHO05D006544 2.3e-29 134.0 372 36.0
Gohir.D11G205800 Gossypium hirsutum HOM05D005407 ORTHO05D006544 1.9e-28 131.0 374 35.8
Gohir.A12G074500 Gossypium hirsutum HOM05D005407 ORTHO05D006544 4.3e-28 129.8 367 36.8
Duzib264G0474 Durio zibethinus HOM05D005407 ORTHO05D006544 6.2e-27 125.9 384 36.2
Gorai.008G080000 Gossypium raimondii HOM05D005407 ORTHO05D006544 9.0e-26 122.1 372 36.0
CiPaw.01G007800 Carya illinoinensis HOM05D005407 ORTHO05D006544 2.0e-25 120.9 376 35.6
Gohir.A02G153500 Gossypium hirsutum HOM05D005407 ORTHO05D006544 5.8e-25 119.4 314 37.6
CiPaw.02G004700 Carya illinoinensis HOM05D005407 ORTHO05D006544 7.6e-25 119.0 394 35.5
Gohir.D12G072700 Gossypium hirsutum HOM05D005407 ORTHO05D006544 1.0e-24 118.6 367 36.0
QL06p039956 Quercus lobata HOM05D005407 ORTHO05D006544 1.0e-24 118.6 380 40.0
GSVIVG01000158001 Vitis vinifera HOM05D005407 ORTHO05D006544 1.3e-24 118.2 366 35.2
Potri.007G051800 Populus trichocarpa HOM05D005407 ORTHO05D006544 8.4e-24 115.5 369 35.8
Duzib187G0216 Durio zibethinus HOM05D005407 ORTHO05D006544 1.9e-23 114.4 387 36.7
Manes.13G114000 Manihot esculenta HOM05D005407 ORTHO05D006544 1.9e-23 114.4 369 37.9
PSO541G0358 Papaver somniferum HOM05D005407 ORTHO05D006544 2.5e-23 114.0 386 37.3
Cfa004094 Carpinus fangiana HOM05D005407 ORTHO05D006544 5.5e-23 112.8 360 38.1
TAR628G1677 Trochodendron aralioides HOM05D005407 ORTHO05D006544 9.3e-23 112.1 387 37.0
Haze_15320 Corylus avellana HOM05D005407 ORTHO05D006544 2.1e-22 110.9 357 36.4
Sabra07G0045500 Salix brachista HOM05D005407 ORTHO05D006544 2.1e-22 110.9 376 36.2
Nitab4.5_0007941g0010 Nicotiana tabacum HOM05D005407 ORTHO05D006544 3.5e-22 110.2 362 33.4
Potri.005G145100 Populus trichocarpa HOM05D005407 ORTHO05D006544 7.9e-22 109.0 386 30.1
Nn1g04631 Nelumbo nucifera HOM05D005407 ORTHO05D006544 2.3e-21 107.5 366 32.5
CsaV3_6G043820 Cucumis sativus L. HOM05D005407 ORTHO05D006544 3.0e-21 107.1 364 32.1
Sabra05G0114800 Salix brachista HOM05D005407 ORTHO05D006544 3.0e-21 107.1 301 35.9
Sabra05G0115900 Salix brachista HOM05D005407 ORTHO05D006544 3.0e-21 107.1 301 35.9
Lj4g0004383 Lotus japonicus HOM05D005407 ORTHO05D006544 8.7e-21 105.5 358 34.1
Nitab4.5_0003878g0070 Nicotiana tabacum HOM05D005407 ORTHO05D006544 1.9e-20 104.4 364 34.3
Duzib147G1232 Durio zibethinus HOM05D005407 ORTHO05D006544 2.5e-20 104.0 384 37.5
MSTRG.2839 Avicennia marina HOM05D005407 ORTHO05D006544 3.3e-20 103.6 372 29.6
Gohir.D03G026900 Gossypium hirsutum HOM05D005407 ORTHO05D006544 3.3e-20 103.6 311 34.7
Gorai.003G028600 Gossypium raimondii HOM05D005407 ORTHO05D006544 3.3e-20 103.6 311 34.4
ClCG01G017290 Citrullus lanatus HOM05D005407 ORTHO05D006544 2.1e-19 100.9 369 34.1
Thecc.01G067900 Theobroma cacao HOM05D005407 ORTHO05D006544 2.1e-19 100.9 375 37.9
SGA_v2.0_scaffold15G07407 Striga asiatica HOM05D005407 ORTHO05D006544 1.1e-18 98.6 371 32.1
MELO3C007607.2 Cucumis melo HOM05D005407 ORTHO05D006544 4.1e-18 96.7 370 35.7
Psat4g083080 Pisum sativum HOM05D005407 ORTHO05D006544 4.1e-18 96.7 362 35.9
PSO675G4008 Papaver somniferum HOM05D005407 ORTHO05D006544 5.3e-18 96.3 388 36.6
TWI09G0600 Tripterygium wilfordii HOM05D005407 ORTHO05D006544 5.3e-18 96.3 340 35.6
Eucgr.I00726 Eucalyptus grandis HOM05D005407 ORTHO05D006544 6.9e-18 95.9 376 34.8
TPR.G23890 Trifolium pratense HOM05D005407 ORTHO05D006544 9.0e-18 95.5 365 36.2
MSTRG.23698 Avicennia marina HOM05D005407 ORTHO05D006544 1.2e-17 95.1 374 27.5
Glyma.05G103000 Glycine max HOM05D005407 ORTHO05D006544 2.0e-17 94.4 362 35.1
Actinidia21238 Actinidia chinensis HOM05D005407 ORTHO05D006544 2.6e-17 94.0 364 32.7
arahy.Tifrunner.gnm1.ann1.IRX7P6 Arachis hypogaea HOM05D005407 ORTHO05D006544 3.4e-17 93.6 360 35.0
Solyc02g092720.1 Solanum lycopersicum HOM05D005407 ORTHO05D006544 4.5e-17 93.2 365 28.8
Sopen02g037270 Solanum pennellii HOM05D005407 ORTHO05D006544 7.6e-17 92.4 363 30.0
arahy.Tifrunner.gnm1.ann1.UV71K9 Arachis hypogaea HOM05D005407 ORTHO05D006544 1.0e-16 92.0 362 34.0
VMungo1011G0001 Vigna mungo HOM05D005407 ORTHO05D006544 2.9e-16 90.5 356 31.7
Sed0008783 Sechium edule HOM05D005407 ORTHO05D006544 5.0e-16 89.7 361 32.7
Oeu040602.1 Olea europaea HOM05D005407 ORTHO05D006544 6.5e-16 89.4 361 32.7
MSTRG.3457 Avicennia marina HOM05D005407 ORTHO05D006544 8.4e-16 89.0 366 28.7
Glyma.17G164300 Glycine max HOM05D005407 ORTHO05D006544 8.4e-16 89.0 362 35.6
SalBow1G5175 Salvia bowleyana HOM05D005407 ORTHO05D006544 5.5e-15 86.3 235 35.3
TWI53G1118 Tripterygium wilfordii HOM05D005407 ORTHO05D006544 5.5e-15 86.3 376 33.0
Cc07_g06740 Coffea canephora HOM05D005407 ORTHO05D006544 9.3e-15 85.5 363 33.3
CAN.G1075.9 Capsicum annuum HOM05D005407 ORTHO05D006544 1.2e-14 85.1 360 28.6
Aqoxy6G02765 Aquilegia oxysepala HOM05D005407 ORTHO05D006544 1.6e-14 84.7 218 39.9
AL8G43980 Arabidopsis lyrata HOM05D005407 ORTHO05D006544 1.6e-14 84.7 237 36.3
Lsat_1_v5_gn_3_87740 Lactuca sativa HOM05D005407 ORTHO05D006544 2.1e-14 84.3 323 28.8
Atru.chr3.207 Acer truncatum HOM05D005407 ORTHO05D006544 2.7e-14 84.0 205 44.9
AT5G67350 Arabidopsis thaliana HOM05D005407 ORTHO05D006544 7.9e-14 82.4 232 35.3
PGSC0003DMG400024943 Solanum tuberosum HOM05D005407 ORTHO05D006544 1.8e-13 81.3 325 29.2
HanXRQChr12g0373231 Helianthus annuus HOM05D005407 ORTHO05D006544 3.9e-13 80.1 361 28.5
DCAR_021471 Daucus carota HOM05D005407 ORTHO05D006544 5.1e-13 79.7 371 27.5
Dinv30062 Davidia involucrata HOM05D005407 ORTHO05D006544 5.1e-13 79.7 295 37.3
Glyma.11G050800 Glycine max HOM05D005407 ORTHO05D006544 1.1e-12 78.6 360 30.6
Gohir.A10G090300 Gossypium hirsutum HOM05D005407 ORTHO05D006544 1.1e-12 78.6 239 35.1
Gorai.011G107400 Gossypium raimondii HOM05D005407 ORTHO05D006544 1.1e-12 78.6 239 33.5
THA.LOC104827519 Tarenaya hassleriana HOM05D005407 ORTHO05D006544 1.9e-12 77.8 343 28.9
C09p11100 Brassica napus HOM05D005407 ORTHO05D006544 2.5e-12 77.4 246 34.1
CARHR280260 Cardamine hirsuta HOM05D005407 ORTHO05D006544 5.7e-12 76.3 232 33.2
Carub.0008s2714 Capsella rubella HOM05D005407 ORTHO05D006544 7.4e-12 75.9 214 34.6
Gohir.D10G097800 Gossypium hirsutum HOM05D005407 ORTHO05D006544 7.4e-12 75.9 239 33.5
A07p16540 Brassica napus HOM05D005407 ORTHO05D006544 9.7e-12 75.5 229 32.3
BraA07t29378Z Brassica rapa HOM05D005407 ORTHO05D006544 9.7e-12 75.5 229 32.3
BolC9t53999H Brassica oleracea HOM05D005407 ORTHO05D006544 1.6e-11 74.7 243 33.3
BolC7t42952H Brassica oleracea HOM05D005407 ORTHO05D006544 2.2e-11 74.3 231 32.0
Lj2g0008966 Lotus japonicus HOM05D005407 ORTHO05D006544 2.2e-11 74.3 364 28.0
PGR004G2820 Punica granatum HOM05D005407 ORTHO05D006544 2.2e-11 74.3 371 31.5
Rhsim08G0096100 Rhododendron simsii HOM05D005407 ORTHO05D006544 3.7e-11 73.6 189 38.1
BcaC04g23209 Brassica carinata HOM05D005407 ORTHO05D006544 4.8e-11 73.2 234 33.3
Migut.H00374 Erythranthe guttata HOM05D005407 ORTHO05D006544 4.8e-11 73.2 361 29.6
Lsat_1_v5_gn_4_162000 Lactuca sativa HOM05D005407 ORTHO05D006544 4.8e-11 73.2 359 26.5
BcaC04g19788 Brassica carinata HOM05D005407 ORTHO05D006544 1.8e-10 71.2 246 32.5
C09p51650 Brassica napus HOM05D005407 ORTHO05D006544 1.8e-10 71.2 246 32.5
BolC9t58026H Brassica oleracea HOM05D005407 ORTHO05D006544 1.8e-10 71.2 246 32.5
BcaB04g20064 Brassica carinata HOM05D005407 ORTHO05D006544 2.4e-10 70.9 360 28.6
Phvul.002G013600 Phaseolus vulgaris HOM05D005407 ORTHO05D006544 4.1e-10 70.1 363 33.3
Thhalv10005384m.g Eutrema salsugineum HOM05D005407 ORTHO05D006544 9.0e-10 68.9 210 33.3
Glyma.01G191400 Glycine max HOM05D005407 ORTHO05D006544 9.0e-10 68.9 359 34.0
EL10Ac6g15663 Beta vulgaris HOM05D005407 ORTHO05D006544 1.2e-09 68.6 316 33.2
SGA_v2.0_scaffold143G35780 Striga asiatica HOM05D005407 ORTHO05D006544 3.4e-09 67.0 254 30.7
Actinidia32821 Actinidia chinensis HOM05D005407 ORTHO05D006544 7.7e-09 65.9 234 35.9
vmacro17985 Vaccinium macrocarpon HOM05D005407 ORTHO05D006544 1.3e-08 65.1 124 39.5
Sp2g29310 Schrenkiella parvula HOM05D005407 ORTHO05D006544 2.2e-08 64.3 357 26.9
VMungo1215G1030 Vigna mungo HOM05D005407 ORTHO05D006544 8.5e-08 62.4 359 34.3
Lalb_Chr16g0389101 Lupinus albus HOM05D005407 ORTHO05D006544 1.1e-07 62.0 305 28.5
Aa31LG1G15900 Aethionema arabicum HOM05D005407 ORTHO05D006544 1.4e-07 61.6 252 29.8
unitig_52.g17607 Utricularia gibba HOM05D005407 ORTHO05D006544 2.5e-07 60.8 244 30.3
Peaxi162Scf00264g00321 Petunia axillaris HOM05D005407 ORTHO05D006544 5.5e-07 59.7 204 29.9
A09p09420 Brassica napus HOM05D005407 ORTHO05D006544 1.2e-06 58.5 361 27.1
Manes.12G112400 Manihot esculenta HOM05D005407 ORTHO05D006544 1.2e-06 58.5 363 33.3
CDE04G2817 Ceratophyllum demersum HOM05D005407 ORTHO05D006544 6.1e-06 56.2 197 30.5
Os03g0439000 Oryza sativa ssp. japonica HOM05D013881 ORTHO05D016369 6.1e-06 56.2 195 34.9


User provided reference genes

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