Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN23G2716 Fragaria x ananassa HOM05D006346 ORTHO05D007910 0.0e+00 1456.8 748 100.0
FAN26G0534 Fragaria x ananassa HOM05D006346 ORTHO05D007910 0.0e+00 1251.9 694 93.9
FvH4_1g00650 Fragaria vesca HOM05D006346 ORTHO05D007910 0.0e+00 1234.6 690 92.9
FAN28G1995 Fragaria x ananassa HOM05D006346 ORTHO05D007910 0.0e+00 1231.5 690 92.8
RcHm_v2.0_Chr2g0085271 Rosa chinensis HOM05D006346 ORTHO05D007910 0.0e+00 1203.3 692 90.3
Prupe.7G265700 Prunus persica HOM05D006346 ORTHO05D007910 1.0e-311 1072.8 697 79.3
MD02G1005300 Malus domestica HOM05D006346 ORTHO05D007910 2.1e-287 992.3 656 79.0
Cfa020798 Carpinus fangiana HOM05D006346 ORTHO05D007910 4.2e-280 968.0 698 71.8
CiPaw.15G165500 Carya illinoinensis HOM05D006346 ORTHO05D007910 3.4e-274 948.3 699 70.7
CANSAT11G2498 Cannabis sativa HOM05D006346 ORTHO05D007910 7.6e-274 947.2 665 71.9
Haze_19155 Corylus avellana HOM05D006346 ORTHO05D007910 1.7e-273 946.0 734 68.1
Dinv42829 Davidia involucrata HOM05D006346 ORTHO05D007910 2.5e-272 942.2 664 73.3
Dinv43271 Davidia involucrata HOM05D006346 ORTHO05D007910 2.5e-272 942.2 664 73.3
Thecc.09G152100 Theobroma cacao HOM05D006346 ORTHO05D007910 1.2e-271 939.9 693 69.7
COL.COLO4_23953 Corchorus olitorius HOM05D006346 ORTHO05D007910 2.7e-271 938.7 665 71.7
Atru.chr7.350 Acer truncatum HOM05D006346 ORTHO05D007910 4.6e-271 937.9 709 68.7
QL02p093888 Quercus lobata HOM05D006346 ORTHO05D007910 1.5e-269 932.9 705 69.6
Lalb_Chr08g0234231 Lupinus albus HOM05D006346 ORTHO05D007910 1.5e-266 922.9 667 71.2
Hma1.2p1_0028F.1_g017690 Hydrangea macrophylla HOM05D006346 ORTHO05D007910 2.6e-266 922.2 722 66.1
Gohir.A04G059826 Gossypium hirsutum HOM05D006346 ORTHO05D007910 1.4e-264 916.4 665 70.4
Gorai.012G099000 Gossypium raimondii HOM05D006346 ORTHO05D007910 3.2e-264 915.2 684 68.7
Potri.018G103700 Populus trichocarpa HOM05D006346 ORTHO05D007910 2.7e-263 912.1 662 69.5
Ciclev10007623m.g Citrus clementina HOM05D006346 ORTHO05D007910 4.6e-263 911.4 655 70.1
Gohir.D04G088700 Gossypium hirsutum HOM05D006346 ORTHO05D007910 4.6e-263 911.4 665 70.1
Sabra18G0089100 Salix brachista HOM05D006346 ORTHO05D007910 7.9e-263 910.6 675 68.4
CsaV3_2G007650 Cucumis sativus L. HOM05D006346 ORTHO05D007910 3.9e-262 908.3 692 67.5
Lj9A719T56 Lonicera japonica HOM05D006346 ORTHO05D007910 5.1e-262 907.9 653 70.9
TWI34G0405 Tripterygium wilfordii HOM05D006346 ORTHO05D007910 5.1e-262 907.9 697 67.4
Sed0021167 Sechium edule HOM05D006346 ORTHO05D007910 2.5e-261 905.6 698 67.0
HanXRQChr10g0313691 Helianthus annuus HOM05D006346 ORTHO05D007910 7.4e-261 904.0 653 70.1
Nitab4.5_0003551g0040 Nicotiana tabacum HOM05D006346 ORTHO05D007910 7.4e-261 904.0 656 69.7
ClCG02G014350 Citrullus lanatus HOM05D006346 ORTHO05D007910 2.8e-260 902.1 702 66.7
PGR102G0252 Punica granatum HOM05D006346 ORTHO05D007910 3.7e-260 901.7 701 67.3
THA.LOC104803912 Tarenaya hassleriana HOM05D006346 ORTHO05D007910 4.8e-260 901.4 696 67.1
CSS0042716 Camellia sinensis var. sinensis HOM05D006346 ORTHO05D007910 3.1e-259 898.7 655 70.4
Glyma.07G102300 Glycine max HOM05D006346 ORTHO05D007910 4.1e-259 898.3 657 69.6
Lj6g0013256 Lotus japonicus HOM05D006346 ORTHO05D007910 1.2e-258 896.7 667 68.5
arahy.Tifrunner.gnm1.ann1.ID3JIZ Arachis hypogaea HOM05D006346 ORTHO05D007910 2.0e-258 896.0 718 64.6
Phvul.003G072700 Phaseolus vulgaris HOM05D006346 ORTHO05D007910 2.2e-257 892.5 662 68.9
AL7G21400 Arabidopsis lyrata HOM05D006346 ORTHO05D007910 3.8e-257 891.7 656 68.6
Nn8g39991 Nelumbo nucifera HOM05D006346 ORTHO05D007910 3.8e-257 891.7 655 70.4
AT4G30720 Arabidopsis thaliana HOM05D006346 ORTHO05D007910 1.1e-256 890.2 657 68.6
Carub.0007s0978 Capsella rubella HOM05D006346 ORTHO05D007910 1.1e-256 890.2 693 66.5
Sopen07g001980 Solanum pennellii HOM05D006346 ORTHO05D007910 1.6e-255 886.3 656 69.4
BraA03t15070Z Brassica rapa HOM05D006346 ORTHO05D007910 4.6e-255 884.8 656 68.1
A03p60280 Brassica napus HOM05D006346 ORTHO05D007910 6.1e-255 884.4 688 66.0
Thhalv10024548m.g Eutrema salsugineum HOM05D006346 ORTHO05D007910 1.0e-254 883.6 658 68.4
Medtr8g467050 Medicago truncatula HOM05D006346 ORTHO05D007910 6.7e-254 880.9 660 68.3
DCAR_019414 Daucus carota HOM05D006346 ORTHO05D007910 3.3e-253 878.6 694 65.4
Hund08940 Selenicereus undatus HOM05D006346 ORTHO05D007910 3.3e-253 878.6 730 64.2
PSO063G0785 Papaver somniferum HOM05D006346 ORTHO05D007910 5.7e-253 877.9 655 67.6
Sp7g28630 Schrenkiella parvula HOM05D006346 ORTHO05D007910 5.7e-253 877.9 657 68.3
PSO782G0769 Papaver somniferum HOM05D006346 ORTHO05D007910 9.7e-253 877.1 655 67.9
BcaNung02744 Brassica carinata HOM05D006346 ORTHO05D007910 1.3e-252 876.7 657 67.7
C07p58190 Brassica napus HOM05D006346 ORTHO05D007910 1.3e-252 876.7 657 67.7
vmacro16782 Vaccinium macrocarpon HOM05D006346 ORTHO05D007910 1.7e-252 876.3 702 65.2
ECA234G1139 Erigeron canadensis HOM05D006346 ORTHO05D007910 2.2e-252 875.9 653 67.5
Aqoxy7G03359 Aquilegia oxysepala HOM05D006346 ORTHO05D007910 4.8e-252 874.8 652 69.6
GSVIVG01008451001 Vitis vinifera HOM05D006346 ORTHO05D007910 6.3e-252 874.4 661 69.0
CAN.G160.15 Capsicum annuum HOM05D006346 ORTHO05D007910 1.1e-251 873.6 657 68.5
BcaNung01563 Brassica carinata HOM05D006346 ORTHO05D007910 3.1e-251 872.1 682 66.9
Rhsim01G0026600 Rhododendron simsii HOM05D006346 ORTHO05D007910 3.1e-251 872.1 698 65.0
Nitab4.5_0002611g0100 Nicotiana tabacum HOM05D006346 ORTHO05D007910 1.5e-250 869.8 656 67.7
Lsat_1_v5_gn_5_89421 Lactuca sativa HOM05D006346 ORTHO05D007910 7.7e-250 867.5 653 68.8
BolC7t46278H Brassica oleracea HOM05D006346 ORTHO05D007910 1.7e-249 866.3 689 65.0
MELO3C004121.2 Cucumis melo HOM05D006346 ORTHO05D007910 1.7e-249 866.3 703 64.4
Cc06_g14630 Coffea canephora HOM05D006346 ORTHO05D007910 2.1e-247 859.4 666 66.8
Aa31LG2G19630 Aethionema arabicum HOM05D006346 ORTHO05D007910 2.3e-246 855.9 659 66.2
AUR62028356 Chenopodium quinoa HOM05D006346 ORTHO05D007910 5.1e-246 854.7 690 64.2
EL10Ac8g18923 Beta vulgaris HOM05D006346 ORTHO05D007910 8.8e-246 854.0 747 60.5
MSTRG.6156 Avicennia marina HOM05D006346 ORTHO05D007910 3.7e-244 848.6 655 66.9
Ca_22901_v3 Cicer arietinum L. HOM05D006346 ORTHO05D007910 1.8e-243 846.3 657 66.5
Migut.J01382 Erythranthe guttata HOM05D006346 ORTHO05D007910 9.4e-240 833.9 655 66.0
arahy.Tifrunner.gnm1.ann1.VMKR8Z Arachis hypogaea HOM05D006346 ORTHO05D007910 1.2e-239 833.6 627 67.8
SGA_v2.0_scaffold45G17017 Striga asiatica HOM05D006346 ORTHO05D007910 2.4e-235 819.3 684 63.0
Actinidia38309 Actinidia chinensis HOM05D006346 ORTHO05D007910 1.6e-234 816.6 650 66.3
HPP92_020605 Vanilla planifolia HOM05D006346 ORTHO05D007910 2.1e-231 806.2 656 62.3
Zm00001eb288040 Zea mays HOM05D006346 ORTHO05D007910 2.0e-229 799.7 664 61.3
Os05g0411200 Oryza sativa ssp. japonica HOM05D006346 ORTHO05D007910 1.7e-228 796.6 690 60.6
Oeu052219.3 Olea europaea HOM05D006346 ORTHO05D007910 4.8e-228 795.0 705 60.1
Sc14g0000950 Simmondsia chinensis HOM05D006346 ORTHO05D007910 1.6e-226 790.0 628 65.8
ATR0739G030 Amborella trichopoda HOM05D006346 ORTHO05D007910 9.4e-224 780.8 615 64.7
Psat4g134640 Pisum sativum HOM05D006346 ORTHO05D007910 9.4e-224 780.8 648 63.0
Solyc07g005870.3 Solanum lycopersicum HOM05D006346 ORTHO05D007910 4.7e-223 778.5 656 63.7
Ah.09g228750 Amaranthus hybridus HOM05D006346 ORTHO05D007910 1.5e-221 773.5 708 58.2
Manes.14G142800 Manihot esculenta HOM05D006346 ORTHO05D007910 1.7e-220 770.0 573 68.6
CDE12G0948 Ceratophyllum demersum HOM05D006346 ORTHO05D007910 1.6e-218 763.5 655 62.4
Peaxi162Scf00401g00218 Petunia axillaris HOM05D006346 ORTHO05D007910 7.7e-218 761.1 697 60.1
unitig_37.g12649 Utricularia gibba HOM05D006346 ORTHO05D007910 3.0e-209 732.6 629 61.0
SalBow1G6401 Salvia bowleyana HOM05D006346 ORTHO05D007910 2.8e-207 726.1 563 66.4
TPR.G10032 Trifolium pratense HOM05D006346 ORTHO05D007910 1.6e-186 657.1 1206 37.7
Mapoly0021s0085 Marchantia polymorpha HOM05D006346 ORTHO05D007910 9.3e-171 604.7 665 50.8
Hma1.2p1_0028F.1_g017700 Hydrangea macrophylla HOM05D006346 ORTHO05D007910 1.2e-170 604.4 463 67.6
Pp3c23_14180 Physcomitrium patens HOM05D006346 ORTHO05D007910 5.1e-169 599.0 637 51.0
SMO146G0018 Selaginella moellendorffii HOM05D006346 ORTHO05D007910 1.5e-168 597.4 635 50.6
AagrBONN_evm.TU.Sc2ySwM_344.1120 Anthoceros agrestis HOM05D006346 ORTHO05D007910 1.3e-164 584.3 670 48.7
TAR383G0381 Trochodendron aralioides HOM05D006346 ORTHO05D007910 3.1e-150 536.6 378 72.5
Cpa.g.sc46.182 Carica papaya HOM05D006346 ORTHO05D007910 1.3e-145 521.2 390 67.7
Glyma.04G155100 Glycine max HOM05D006346 ORTHO05D007910 4.6e-138 496.1 391 64.5
Cre17.g744997 Chlamydomonas reinhardtii HOM05D006346 ORTHO05D007910 4.5e-125 453.0 741 39.7
PRCOL_00000449 Prasinoderma coloniale HOM05D006346 ORTHO05D007910 3.2e-123 446.8 631 43.7
Eucgr.C02507 Eucalyptus grandis HOM05D006346 ORTHO05D007910 3.0e-121 440.3 363 62.8
MCO14G279 Micromonas commoda HOM05D006346 ORTHO05D007910 6.7e-121 439.1 498 48.6
Eucgr.C02508 Eucalyptus grandis HOM05D006346 ORTHO05D007910 2.0e-101 374.4 309 65.0
VMungo0251G1020 Vigna mungo HOM05D006346 ORTHO05D007910 4.7e-98 363.2 232 75.9
CAN.G160.19 Capsicum annuum HOM05D006346 ORTHO05D007910 4.0e-97 360.1 470 48.1
AUR62025356 Chenopodium quinoa HOM05D006346 ORTHO05D007910 8.6e-92 342.4 307 59.9
Cpa.g.sc46.183 Carica papaya HOM05D006346 ORTHO05D007910 1.3e-87 328.6 246 68.3
TAR383G0466 Trochodendron aralioides HOM05D006346 ORTHO05D007910 2.8e-82 310.8 183 80.9
CARHR238600 Cardamine hirsuta HOM05D006346 ORTHO05D007910 6.2e-82 309.7 245 66.9
Actinidia24372 Actinidia chinensis HOM05D006346 ORTHO05D007910 6.8e-73 279.6 663 33.5
PGSC0003DMG400011203 Solanum tuberosum HOM05D006346 ORTHO05D007910 4.6e-69 266.9 162 79.6
AUR62025355 Chenopodium quinoa HOM05D006346 ORTHO05D007910 9.0e-65 252.7 162 75.3
FAN23G0300 Fragaria x ananassa HOM05D006346 ORTHO05D007910 5.3e-57 226.9 114 99.1
Glyma.04G155150 Glycine max HOM05D006346 ORTHO05D007910 5.5e-46 190.3 146 68.5
MD15G1149600 Malus domestica HOM05D006346 ORTHO05D007910 1.2e-40 172.6 204 52.5
SEGI_02941 Sequoiadendron giganteum HOM05D006346 ORTHO05D007910 1.6e-37 162.2 114 65.8
SEGI_30041 Sequoiadendron giganteum HOM05D006346 ORTHO05D007910 2.6e-32 144.8 102 68.6
CAN.G1961.3 Capsicum annuum HOM05D006346 ORTHO05D007910 1.8e-28 132.1 162 50.0
Glyma.04G155200 Glycine max HOM05D006346 ORTHO05D007910 5.9e-24 117.1 99 59.6
SalBow1G2918 Salvia bowleyana HOM05D006346 ORTHO05D007910 1.9e-22 112.1 90 63.3
SEGI_23921 Sequoiadendron giganteum HOM05D006346 ORTHO05D007910 9.7e-19 99.8 96 50.0
ECA238G2318 Erigeron canadensis HOM05D006346 ORTHO05D007910 3.1e-17 94.7 68 67.6
HanXRQChr01g0001911 Helianthus annuus HOM05D006346 ORTHO05D007910 2.0e-16 92.0 53 75.5
Rhsim01G0141500 Rhododendron simsii HOM05D006319 ORTHO05D007963 4.2e-14 84.3 166 41.6
A05p44400 Brassica napus HOM05D034890 ORTHO05D100541 6.7e-12 77.0 69 55.1


User provided reference genes

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