Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN23G2617 Fragaria x ananassa HOM05D006516 ORTHO05D008083 3.1e-141 505.4 307 100.0
FAN26G1784 Fragaria x ananassa HOM05D006516 ORTHO05D008083 7.3e-130 467.6 321 87.5
FAN28G2638 Fragaria x ananassa HOM05D006516 ORTHO05D008083 8.0e-129 464.2 321 86.9
RcHm_v2.0_Chr2g0122781 Rosa chinensis HOM05D006516 ORTHO05D008083 5.2e-112 408.3 238 87.8
FAN19G1952 Fragaria x ananassa HOM05D006516 ORTHO05D008083 2.4e-109 399.4 332 73.8
MD00G1064700 Malus domestica HOM05D006516 ORTHO05D008083 3.5e-108 395.6 237 84.8
Prupe.4G278200 Prunus persica HOM05D006516 ORTHO05D008083 2.1e-105 386.3 220 87.3
CANSAT01G0949 Cannabis sativa HOM05D006516 ORTHO05D008083 3.2e-101 372.5 225 81.8
Sabra07G0082800 Salix brachista HOM05D006516 ORTHO05D008083 2.3e-99 366.3 244 75.4
Atru.chr4.1049 Acer truncatum HOM05D006516 ORTHO05D008083 3.9e-99 365.5 234 77.8
TAR628G0816 Trochodendron aralioides HOM05D006516 ORTHO05D008083 5.1e-99 365.2 241 77.2
Cpa.g.sc37.17 Carica papaya HOM05D006516 ORTHO05D008083 1.5e-98 363.6 247 76.5
Potri.007G099900 Populus trichocarpa HOM05D006516 ORTHO05D008083 7.3e-98 361.3 227 79.3
Dinv30343 Davidia involucrata HOM05D006516 ORTHO05D008083 9.6e-98 360.9 243 75.7
CSS0037144 Camellia sinensis var. sinensis HOM05D006516 ORTHO05D008083 1.3e-97 360.5 243 75.3
Eucgr.I00111 Eucalyptus grandis HOM05D006516 ORTHO05D008083 1.3e-97 360.5 244 74.2
Thecc.01G139400 Theobroma cacao HOM05D006516 ORTHO05D008083 1.3e-97 360.5 221 80.5
MELO3C023197.2 Cucumis melo HOM05D006516 ORTHO05D008083 1.4e-96 357.1 242 74.4
CsaV3_2G019760 Cucumis sativus L. HOM05D006516 ORTHO05D008083 2.4e-96 356.3 243 73.7
PGR119G1413 Punica granatum HOM05D006516 ORTHO05D008083 3.1e-96 355.9 238 76.9
Gohir.D04G033500 Gossypium hirsutum HOM05D006516 ORTHO05D008083 6.9e-96 354.8 222 79.3
Solyc04g015480.3 Solanum lycopersicum HOM05D006516 ORTHO05D008083 1.2e-95 354.0 218 79.4
Sopen04g007550 Solanum pennellii HOM05D006516 ORTHO05D008083 1.2e-95 354.0 218 79.4
TWI31G0808 Tripterygium wilfordii HOM05D006516 ORTHO05D008083 1.5e-95 353.6 219 79.5
Gohir.A05G381800 Gossypium hirsutum HOM05D006516 ORTHO05D008083 2.0e-95 353.2 222 78.8
Ciclev10001875m.g Citrus clementina HOM05D006516 ORTHO05D008083 4.5e-95 352.1 236 75.4
CiPaw.03G117200 Carya illinoinensis HOM05D006516 ORTHO05D008083 1.7e-94 350.1 252 73.0
BraA01t00462Z Brassica rapa HOM05D006516 ORTHO05D008083 4.9e-94 348.6 234 72.2
Manes.12G147400 Manihot esculenta HOM05D006516 ORTHO05D008083 4.9e-94 348.6 221 79.6
C01p05200 Brassica napus HOM05D006516 ORTHO05D008083 6.4e-94 348.2 234 72.2
THA.LOC104804401 Tarenaya hassleriana HOM05D006516 ORTHO05D008083 6.4e-94 348.2 238 73.5
BcaC09g52164 Brassica carinata HOM05D006516 ORTHO05D008083 8.4e-94 347.8 235 72.8
Sc06g0006730 Simmondsia chinensis HOM05D006516 ORTHO05D008083 8.4e-94 347.8 235 73.2
Oeu011021.1 Olea europaea HOM05D006516 ORTHO05D008083 1.1e-93 347.4 243 72.4
A01p04790 Brassica napus HOM05D006516 ORTHO05D008083 1.4e-93 347.1 225 75.1
AL7G18070 Arabidopsis lyrata HOM05D006516 ORTHO05D008083 4.2e-93 345.5 233 73.0
MSTRG.23495 Avicennia marina HOM05D006516 ORTHO05D008083 4.2e-93 345.5 225 75.1
PSO170G3530 Papaver somniferum HOM05D006516 ORTHO05D008083 4.2e-93 345.5 235 74.9
Sed0013830 Sechium edule HOM05D006516 ORTHO05D008083 9.3e-93 344.4 218 77.1
Carub.0007s0699 Capsella rubella HOM05D006516 ORTHO05D008083 1.2e-92 344.0 236 72.5
HanXRQChr15g0469261 Helianthus annuus HOM05D006516 ORTHO05D008083 7.9e-92 341.3 231 72.7
EL10Ac4g09645 Beta vulgaris HOM05D006516 ORTHO05D008083 1.3e-91 340.5 236 70.3
AT4G33480 Arabidopsis thaliana HOM05D006516 ORTHO05D008083 2.3e-91 339.7 233 71.7
CARHR241560 Cardamine hirsuta HOM05D006516 ORTHO05D008083 2.3e-91 339.7 231 71.9
QL10p040847 Quercus lobata HOM05D006516 ORTHO05D008083 3.0e-91 339.3 217 79.3
FvH4_1g25120 Fragaria vesca HOM05D006516 ORTHO05D008083 6.6e-91 338.2 285 72.3
Lsat_1_v5_gn_5_69121 Lactuca sativa HOM05D006516 ORTHO05D008083 1.1e-90 337.4 218 75.2
ECA233G3512 Erigeron canadensis HOM05D000595 ORTHO05D006275 1.9e-90 336.7 216 75.5
Haze_25362 Corylus avellana HOM05D006516 ORTHO05D008083 7.4e-90 334.7 239 72.4
AUR62000533 Chenopodium quinoa HOM05D006516 ORTHO05D008083 1.3e-89 334.0 237 68.8
Migut.H00817 Erythranthe guttata HOM05D006516 ORTHO05D008083 1.3e-89 334.0 225 73.3
CDE08G1595 Ceratophyllum demersum HOM05D006516 ORTHO05D008083 2.1e-89 333.2 238 68.1
Cfa002190 Carpinus fangiana HOM05D006516 ORTHO05D008083 8.1e-89 331.3 314 58.6
BolC1t00500H Brassica oleracea HOM05D006516 ORTHO05D008021 1.5e-87 327.0 220 71.4
Aqoxy6G00267 Aquilegia oxysepala HOM05D006516 ORTHO05D008083 5.8e-87 325.1 216 73.1
PGSC0003DMG400027234 Solanum tuberosum HOM05D006516 ORTHO05D008083 8.4e-86 321.2 258 64.7
Nitab4.5_0001663g0100 Nicotiana tabacum HOM05D006516 ORTHO05D008083 1.1e-85 320.9 243 68.3
SGA_v2.0_scaffold54G19604 Striga asiatica HOM05D006516 ORTHO05D008083 7.1e-85 318.2 221 70.1
DCAR_019988 Daucus carota HOM05D006516 ORTHO05D008083 1.2e-84 317.4 216 71.3
Actinidia06588 Actinidia chinensis HOM05D006516 ORTHO05D008083 3.5e-84 315.8 214 74.8
Cc02_g33920 Coffea canephora HOM05D006516 ORTHO05D008083 6.0e-84 315.1 204 75.0
arahy.Tifrunner.gnm1.ann1.YP7URC Arachis hypogaea HOM05D006516 ORTHO05D008083 7.9e-84 314.7 211 73.5
GSVIVG01022337001 Vitis vinifera HOM05D006516 ORTHO05D008083 1.3e-83 313.9 198 79.3
Actinidia20043 Actinidia chinensis HOM05D006516 ORTHO05D008083 3.9e-83 312.4 214 73.4
CAN.G676.43 Capsicum annuum HOM05D006516 ORTHO05D008083 6.7e-83 311.6 223 72.2
unitig_899.g15157 Utricularia gibba HOM05D006516 ORTHO05D008083 6.7e-83 311.6 221 69.2
Glyma.05G194700 Glycine max HOM05D006516 ORTHO05D008083 2.5e-82 309.7 224 67.4
Lj4g0011477 Lotus japonicus HOM05D006516 ORTHO05D008083 4.8e-81 305.4 226 66.8
Lalb_Chr08g0238111 Lupinus albus HOM05D006516 ORTHO05D008083 6.2e-81 305.1 215 71.2
Lalb_Chr13g0296721 Lupinus albus HOM05D006516 ORTHO05D008083 1.4e-80 303.9 230 66.1
COL.COLO4_12072 Corchorus olitorius HOM05D006516 ORTHO05D008083 4.0e-80 302.4 225 69.3
arahy.Tifrunner.gnm1.ann1.8KJ0MH Arachis hypogaea HOM05D006516 ORTHO05D008083 1.2e-79 300.8 196 74.5
Gorai.012G037800 Gossypium raimondii HOM05D006516 ORTHO05D008083 2.6e-79 299.7 198 74.7
PSO528G0185 Papaver somniferum HOM05D006516 ORTHO05D008083 3.4e-79 299.3 196 77.6
Hund07224 Selenicereus undatus HOM05D006516 ORTHO05D008083 3.4e-79 299.3 232 64.7
PSO063G7430 Papaver somniferum HOM05D006516 ORTHO05D008083 3.8e-78 295.8 196 77.0
Duzib147G1587 Durio zibethinus HOM05D006516 ORTHO05D008083 8.4e-78 294.7 210 71.4
arahy.Tifrunner.gnm1.ann1.I5MJF2 Arachis hypogaea HOM05D006516 ORTHO05D008083 1.4e-77 293.9 214 66.8
Ah.06g188920 Amaranthus hybridus HOM05D006516 ORTHO05D008083 3.2e-77 292.7 239 61.9
CDE06G0289 Ceratophyllum demersum HOM05D000237 ORTHO05D008083 2.7e-76 289.7 186 76.3
AUR62006880 Chenopodium quinoa HOM05D006516 ORTHO05D008083 2.7e-76 289.7 330 49.4
Lj1g0010918 Lotus japonicus HOM05D006516 ORTHO05D008083 6.0e-76 288.5 211 67.3
Thhalv10025682m.g Eutrema salsugineum HOM05D006516 ORTHO05D008083 1.0e-75 287.7 200 69.5
Glyma.06G156800 Glycine max HOM05D006516 ORTHO05D008083 2.3e-75 286.6 214 68.2
Zm00001eb434490 Zea mays HOM05D006516 ORTHO05D008083 3.9e-75 285.8 238 58.4
Medtr8g094200 Medicago truncatula HOM05D006516 ORTHO05D008083 3.3e-74 282.7 210 64.3
Psat5g086920 Pisum sativum HOM05D006516 ORTHO05D008083 3.3e-74 282.7 216 66.2
arahy.Tifrunner.gnm1.ann1.5F6SWA Arachis hypogaea HOM05D006516 ORTHO05D008083 3.7e-73 279.3 228 63.2
VMungo1309G1214 Vigna mungo HOM05D006516 ORTHO05D008083 3.1e-72 276.2 214 64.5
Ca_17618_v3 Cicer arietinum L. HOM05D006516 ORTHO05D008083 4.1e-72 275.8 202 65.8
TPR.G37339 Trifolium pratense HOM05D006516 ORTHO05D008083 6.1e-68 261.9 206 61.7
Ca_16991_v3 Cicer arietinum L. HOM05D006516 ORTHO05D008083 1.8e-67 260.4 262 55.0
Ca_17019_v3 Cicer arietinum L. HOM05D006516 ORTHO05D008083 1.8e-67 260.4 262 55.0
Psat7g044240 Pisum sativum HOM05D006516 ORTHO05D008083 4.8e-65 252.3 210 59.5
Medtr3g096860 Medicago truncatula HOM05D006516 ORTHO05D008083 1.3e-62 244.2 205 60.0
CiPaw.04G078600 Carya illinoinensis HOM05D006516 ORTHO05D008083 4.2e-61 239.2 243 56.8
Phvul.009G153500 Phaseolus vulgaris HOM05D006516 ORTHO05D008083 6.3e-57 225.3 177 62.7
Nitab4.5_0000733g0220 Nicotiana tabacum HOM05D006516 ORTHO05D008083 5.3e-56 222.2 178 62.9
TPR.G33574 Trifolium pratense HOM05D006516 ORTHO05D008083 6.9e-56 221.9 167 64.7
Peaxi162Scf01713g00018 Petunia axillaris HOM05D006516 ORTHO05D008083 8.5e-54 214.9 137 73.7
ATR0138G020 Amborella trichopoda HOM05D006516 ORTHO05D008083 5.5e-53 212.2 169 62.7
Aa31sc146G60 Aethionema arabicum HOM05D006516 ORTHO05D008083 7.2e-53 211.8 141 72.3
Nn1g08886 Nelumbo nucifera HOM05D006516 ORTHO05D008083 1.6e-52 210.7 122 78.7
Sp7g31210 Schrenkiella parvula HOM05D006516 ORTHO05D008083 2.1e-52 210.3 139 73.4
Mapoly0149s0016 Marchantia polymorpha HOM05D006516 ORTHO05D008083 2.0e-50 203.8 213 49.8
AagrBONN_evm.TU.Sc2ySwM_369.382 Anthoceros agrestis HOM05D006516 ORTHO05D008083 8.2e-49 198.4 234 48.7
ClCG02G000090 Citrullus lanatus HOM05D006516 ORTHO05D008083 2.4e-48 196.8 130 72.3
Pp3c3_32640 Physcomitrium patens HOM05D006516 ORTHO05D008083 9.1e-48 194.9 215 50.7
Rhsim10G0127700 Rhododendron simsii HOM05D006516 ORTHO05D008083 1.7e-46 190.7 190 52.1
MBI06_g45441_MAGBIO Magnolia biondii HOM05D006516 ORTHO05D008083 9.4e-45 184.9 205 51.7
Hma1.2p1_1551F.1_g290160 Hydrangea macrophylla HOM05D006516 ORTHO05D008083 1.6e-36 157.5 90 82.2
Aa31sc146G50 Aethionema arabicum HOM05D006516 ORTHO05D008083 1.4e-35 154.5 88 83.0
Nn1g08902 Nelumbo nucifera HOM05D006516 ORTHO05D008083 2.3e-35 153.7 88 83.0
CBR_g51961 Chara braunii HOM05D006516 ORTHO05D008083 9.2e-24 115.2 227 34.8
Peaxi162Scf01713g00017 Petunia axillaris HOM05D006516 ORTHO05D008083 2.0e-23 114.0 69 82.6
Nn1g08901 Nelumbo nucifera HOM05D003028 ORTHO05D003465 1.1e-21 108.2 142 43.7
Sp7g31200 Schrenkiella parvula HOM05D006516 ORTHO05D008083 2.3e-19 100.5 61 82.0
PRCOL_00004760 Prasinoderma coloniale HOM05D006516 ORTHO05D008083 1.2e-18 98.2 165 35.2
FAN28G1699 Fragaria x ananassa HOM05D006516 ORTHO05D008083 4.6e-15 86.3 48 95.8
MCO05G028 Micromonas commoda HOM05D006516 ORTHO05D008083 4.6e-15 86.3 173 33.5
COL.COLO4_30311 Corchorus olitorius HOM05D000221 ORTHO05D008083 1.5e-10 71.2 42 78.6
MBI06_g33106_MAGBIO Magnolia biondii HOM05D006516 ORTHO05D008083 2.6e-10 70.5 66 54.5
ATR0138G010 Amborella trichopoda HOM05D006516 ORTHO05D008083 6.6e-06 55.8 33 87.9


User provided reference genes

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