Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN23G2550 Fragaria x ananassa HOM05D004485 ORTHO05D005485 0.0e+00 1113.2 735 100.0
FAN28G2435 Fragaria x ananassa HOM05D004485 ORTHO05D005485 0.0e+00 1098.2 735 96.3
FvH4_1g05970 Fragaria vesca HOM05D004485 ORTHO05D005485 1.1e-309 1066.2 735 94.6
FAN19G2910 Fragaria x ananassa HOM05D004485 ORTHO05D005485 4.2e-309 1064.3 735 87.2
FAN26G2333 Fragaria x ananassa HOM05D004485 ORTHO05D005485 3.3e-306 1054.7 735 93.6
FAN26G0748 Fragaria x ananassa HOM05D004485 ORTHO05D005485 8.2e-305 1050.0 735 93.3
RcHm_v2.0_Chr2g0091661 Rosa chinensis HOM05D004485 ORTHO05D005485 3.1e-280 968.4 735 87.8
Prupe.7G221400 Prunus persica HOM05D004485 ORTHO05D005485 1.7e-230 803.1 777 62.8
MD02G1064300 Malus domestica HOM05D004485 ORTHO05D005485 3.4e-226 788.9 735 63.9
MD15G1195100 Malus domestica HOM05D004485 ORTHO05D005485 3.5e-223 778.9 737 63.6
Dinv36695 Davidia involucrata HOM05D004485 ORTHO05D005485 3.2e-192 676.0 738 58.0
CiPaw.04G158800 Carya illinoinensis HOM05D004485 ORTHO05D005485 3.1e-187 659.4 762 56.7
CiPaw.03G226100 Carya illinoinensis HOM05D004485 ORTHO05D005485 4.1e-187 659.1 743 58.0
Thecc.09G101900 Theobroma cacao HOM05D004485 ORTHO05D005485 5.3e-187 658.7 738 58.8
QL02p042072 Quercus lobata HOM05D004485 ORTHO05D005485 5.9e-186 655.2 738 57.9
Potri.018G086600 Populus trichocarpa HOM05D004485 ORTHO05D005485 5.0e-185 652.1 735 56.3
Atru.chr7.1446 Acer truncatum HOM05D004485 ORTHO05D005485 9.4e-184 647.9 739 57.1
GSVIVG01015314001 Vitis vinifera HOM05D004485 ORTHO05D005485 2.3e-182 643.3 738 55.7
CANSAT56G2449 Cannabis sativa HOM05D004485 ORTHO05D005485 1.5e-181 640.6 737 57.0
Duzib168G0844 Durio zibethinus HOM05D004485 ORTHO05D005485 5.3e-179 632.1 738 58.9
CSS0002032 Camellia sinensis var. sinensis HOM05D004485 ORTHO05D005485 1.6e-178 630.6 727 56.4
Ciclev10007632m.g Citrus clementina HOM05D004485 ORTHO05D005485 7.7e-178 628.2 743 56.3
TAR624G1325 Trochodendron aralioides HOM05D004485 ORTHO05D005485 3.8e-177 625.9 738 55.0
Actinidia17528 Actinidia chinensis HOM05D004485 ORTHO05D005485 1.5e-176 624.0 739 56.3
Sabra18G0074900 Salix brachista HOM05D004485 ORTHO05D005485 4.2e-176 622.5 740 55.4
TWI34G0799 Tripterygium wilfordii HOM05D004485 ORTHO05D005485 2.1e-175 620.2 736 54.9
Gohir.A08G242800 Gossypium hirsutum HOM05D004485 ORTHO05D005485 5.2e-174 615.5 744 54.7
Actinidia09445 Actinidia chinensis HOM05D004485 ORTHO05D005485 8.8e-174 614.8 739 54.5
Nn8g39096 Nelumbo nucifera HOM05D004485 ORTHO05D005485 2.4e-171 606.7 741 54.1
Duzib187G1416 Durio zibethinus HOM05D004485 ORTHO05D005485 5.3e-171 605.5 738 54.1
Gohir.D08G263700 Gossypium hirsutum HOM05D004485 ORTHO05D005485 7.0e-171 605.1 746 52.9
CSS0009570 Camellia sinensis var. sinensis HOM05D004485 ORTHO05D005485 1.3e-169 600.9 727 54.7
Gohir.A06G066600 Gossypium hirsutum HOM05D004485 ORTHO05D005485 2.2e-169 600.1 738 53.0
Manes.16G110100 Manihot esculenta HOM05D004485 ORTHO05D005485 2.2e-169 600.1 621 60.1
Gorai.010G076200 Gossypium raimondii HOM05D004485 ORTHO05D005485 3.2e-168 596.3 767 57.5
Gohir.D06G065100 Gossypium hirsutum HOM05D004485 ORTHO05D005485 5.5e-168 595.5 736 52.7
Eucgr.C01004 Eucalyptus grandis HOM05D004485 ORTHO05D005485 1.2e-167 594.3 743 52.8
TPR.G21387 Trifolium pratense HOM05D004485 ORTHO05D005485 2.1e-167 593.6 743 62.2
Glyma.01G008900 Glycine max HOM05D004485 ORTHO05D005485 6.8e-166 588.6 745 53.2
PSO210G4150 Papaver somniferum HOM05D004485 ORTHO05D005485 1.5e-165 587.4 742 54.3
Lalb_Chr14g0371821 Lupinus albus HOM05D004485 ORTHO05D005485 2.0e-165 587.0 744 54.4
Glyma.16G077500 Glycine max HOM05D004485 ORTHO05D005485 2.6e-165 586.6 742 52.3
Oeu053166.1 Olea europaea HOM05D004485 ORTHO05D005485 3.7e-164 582.8 747 57.8
MELO3C004583.2 Cucumis melo HOM05D004485 ORTHO05D005485 8.3e-164 581.6 744 53.1
Lj2g0014691 Lotus japonicus HOM05D004485 ORTHO05D005485 3.1e-163 579.7 747 60.4
Hma1.2p1_0571F.1_g180870 Hydrangea macrophylla HOM05D004485 ORTHO05D005485 5.4e-163 578.9 733 52.5
CsaV3_2G001970 Cucumis sativus L. HOM05D004485 ORTHO05D005485 9.1e-163 578.2 747 52.5
Ca_25562_v3 Cicer arietinum L. HOM05D004485 ORTHO05D005485 1.6e-162 577.4 744 61.3
Medtr6g088595 Medicago truncatula HOM05D004485 ORTHO05D005485 1.6e-162 577.4 748 61.8
PSO210G3171 Papaver somniferum HOM05D004485 ORTHO05D005485 2.7e-162 576.6 745 55.7
Sed0011847 Sechium edule HOM05D004485 ORTHO05D005485 1.5e-160 570.9 770 50.9
Phvul.004G170300 Phaseolus vulgaris HOM05D004485 ORTHO05D005485 4.7e-159 565.8 741 57.1
Lalb_Chr24g0397331 Lupinus albus HOM05D004485 ORTHO05D005485 5.7e-157 558.9 758 53.2
PGR102G0995 Punica granatum HOM05D004485 ORTHO05D005485 7.5e-157 558.5 757 53.2
Gorai.004G281700 Gossypium raimondii HOM05D004485 ORTHO05D005485 1.3e-156 557.8 630 56.5
Sc08g0007920 Simmondsia chinensis HOM05D004485 ORTHO05D005485 2.2e-156 557.0 740 50.8
THA.LOC104820040 Tarenaya hassleriana HOM05D004485 ORTHO05D005485 1.1e-155 554.7 743 58.8
Sopen12g003350 Solanum pennellii HOM05D004485 ORTHO05D005485 1.8e-155 553.9 750 50.5
Haze_25812 Corylus avellana HOM05D004485 ORTHO05D005485 2.4e-155 553.5 683 55.6
Solyc12g008390.3 Solanum lycopersicum HOM05D004485 ORTHO05D005485 4.1e-155 552.7 750 50.4
VMungo0464G1472 Vigna mungo HOM05D004485 ORTHO05D005485 7.0e-155 552.0 741 56.0
Psat1g046640 Pisum sativum HOM05D004485 ORTHO05D005485 9.2e-155 551.6 748 54.5
EL10Ac8g18398 Beta vulgaris HOM05D004485 ORTHO05D005485 1.2e-154 551.2 740 50.5
COL.COLO4_34764 Corchorus olitorius HOM05D004485 ORTHO05D005485 2.7e-154 550.1 744 50.9
Migut.K00530 Erythranthe guttata HOM05D004485 ORTHO05D005485 1.0e-153 548.1 729 50.9
Rhsim05G0040900 Rhododendron simsii HOM05D004485 ORTHO05D005485 1.3e-153 547.7 739 51.2
ClCG11G002190 Citrullus lanatus HOM05D004485 ORTHO05D005485 3.8e-153 546.2 747 50.5
MSTRG.26380 Avicennia marina HOM05D004485 ORTHO05D005485 5.0e-153 545.8 746 50.5
Nitab4.5_0013389g0010 Nicotiana tabacum HOM05D004485 ORTHO05D005485 8.6e-153 545.0 794 48.7
BolC9t54403H Brassica oleracea HOM05D004485 ORTHO05D005485 7.5e-149 531.9 751 48.3
BcaNung04089 Brassica carinata HOM05D004485 ORTHO05D005485 3.7e-148 529.6 755 50.2
C09p15010 Brassica napus HOM05D004485 ORTHO05D005485 4.1e-147 526.2 747 48.5
BraA09t36912Z Brassica rapa HOM05D004485 ORTHO05D005485 7.0e-147 525.4 744 48.8
HanXRQChr12g0358161 Helianthus annuus HOM05D004485 ORTHO05D005485 7.0e-147 525.4 787 57.9
A09p12650 Brassica napus HOM05D004485 ORTHO05D005485 4.6e-146 522.7 742 48.8
Carub.0003s3420 Capsella rubella HOM05D004485 ORTHO05D005485 6.0e-146 522.3 731 51.0
Sp3g33270 Schrenkiella parvula HOM05D004485 ORTHO05D005485 3.9e-145 519.6 753 55.9
Thhalv10001922m.g Eutrema salsugineum HOM05D004485 ORTHO05D005485 2.5e-144 516.9 748 48.3
CAN.G1642.10 Capsicum annuum HOM05D004485 ORTHO05D005485 4.3e-144 516.2 748 48.7
AL3G48250 Arabidopsis lyrata HOM05D004485 ORTHO05D005485 5.6e-144 515.8 735 49.4
arahy.Tifrunner.gnm1.ann1.8771PM Arachis hypogaea HOM05D004485 ORTHO05D005485 1.2e-143 514.6 776 51.2
arahy.Tifrunner.gnm1.ann1.N3ID59 Arachis hypogaea HOM05D004485 ORTHO05D005485 1.2e-143 514.6 745 51.7
MBI07_g22518_MAGBIO Magnolia biondii HOM05D004485 ORTHO05D005485 2.1e-143 513.8 747 48.9
AT2G19950 Arabidopsis thaliana HOM05D004485 ORTHO05D005485 1.2e-141 508.1 734 48.8
ECA236G0540 Erigeron canadensis HOM05D004485 ORTHO05D005485 1.2e-141 508.1 626 55.4
Aqoxy7G03881 Aquilegia oxysepala HOM05D004485 ORTHO05D005485 2.0e-141 507.3 763 51.0
CARHR110390 Cardamine hirsuta HOM05D004485 ORTHO05D005485 5.8e-141 505.8 744 50.8
Nitab4.5_0000566g0170 Nicotiana tabacum HOM05D004485 ORTHO05D005485 6.4e-140 502.3 765 47.8
Os01g0744400 Oryza sativa ssp. japonica HOM05D004485 ORTHO05D005485 5.4e-139 499.2 762 46.5
AUR62021427 Chenopodium quinoa HOM05D004485 ORTHO05D005485 1.1e-136 491.5 774 46.1
vmacro10859 Vaccinium macrocarpon HOM05D004485 ORTHO05D005485 1.2e-135 488.0 656 52.3
HPP92_005563 Vanilla planifolia HOM05D004485 ORTHO05D005485 1.1e-134 485.0 487 59.3
Aa31LG8G16840 Aethionema arabicum HOM05D004485 ORTHO05D005485 1.4e-134 484.6 734 49.7
unitig_899.g15433 Utricularia gibba HOM05D004485 ORTHO05D005485 1.4e-134 484.6 746 48.1
Zm00001eb371090 Zea mays HOM05D004485 ORTHO05D005485 4.0e-134 483.0 743 46.0
Zm00001eb153530 Zea mays HOM05D004485 ORTHO05D005485 1.5e-133 481.1 756 45.1
Lsat_1_v5_gn_8_96840 Lactuca sativa HOM05D004485 ORTHO05D005485 1.3e-132 478.0 804 48.4
CDE04G3494 Ceratophyllum demersum HOM05D004485 ORTHO05D005485 4.1e-131 473.0 726 44.8
Peaxi162Scf00665g00331 Petunia axillaris HOM05D004485 ORTHO05D005485 3.9e-129 466.5 773 45.4
ATR0705G155 Amborella trichopoda HOM05D004485 ORTHO05D005485 3.3e-128 463.4 749 45.8
MBI01_g35400_MAGBIO Magnolia biondii HOM05D004485 ORTHO05D005485 1.3e-124 451.4 828 42.1
SEGI_40884 Sequoiadendron giganteum HOM05D004485 ORTHO05D005485 6.2e-119 432.6 756 42.2
SGA_v2.0_scaffold129G34191 Striga asiatica HOM05D004485 ORTHO05D005485 6.0e-114 416.0 390 62.8
arahy.Tifrunner.gnm1.ann1.TC5UZA Arachis hypogaea HOM05D004485 ORTHO05D005485 5.8e-109 399.4 751 42.1
arahy.Tifrunner.gnm1.ann1.96JC9B Arachis hypogaea HOM05D004485 ORTHO05D005485 1.2e-106 391.7 751 42.1
BcaC04g22803 Brassica carinata HOM05D004485 ORTHO05D005485 7.9e-106 389.0 629 45.3
AUR62010900 Chenopodium quinoa HOM05D004485 ORTHO05D005485 4.0e-102 376.7 683 45.4
Ah.14g083300 Amaranthus hybridus HOM05D004485 ORTHO05D005485 1.2e-98 365.2 451 52.5
Actinidia39785 Actinidia chinensis HOM05D004485 ORTHO05D005485 3.0e-97 360.5 237 82.7
Oeu064192.1 Olea europaea HOM05D004485 ORTHO05D005485 1.9e-88 331.3 246 77.6
AagrBONN_evm.TU.Sc2ySwM_368.430 Anthoceros agrestis HOM05D004485 ORTHO05D005485 2.2e-84 317.8 733 36.4
Hund28808 Selenicereus undatus HOM05D004485 ORTHO05D005485 5.5e-83 313.2 220 78.2
Hund28810 Selenicereus undatus HOM05D004485 ORTHO05D005485 5.5e-83 313.2 220 78.2
Cc06_g10340 Coffea canephora HOM05D004485 ORTHO05D005485 4.1e-78 297.0 196 83.7
MBI07_g30871_MAGBIO Magnolia biondii HOM05D004485 ORTHO05D005485 6.9e-78 296.2 241 70.5
Cc06_g10330 Coffea canephora HOM05D004485 ORTHO05D005485 2.2e-76 291.2 554 42.2
CDE02G0772 Ceratophyllum demersum HOM05D004485 ORTHO05D005485 9.7e-72 275.8 229 68.6
Potri.006G164350 Populus trichocarpa HOM05D004485 ORTHO05D005485 6.7e-65 253.1 182 79.1
Hund29368 Selenicereus undatus HOM05D004485 ORTHO05D005485 4.1e-62 243.8 529 39.5
Hund29369 Selenicereus undatus HOM05D004485 ORTHO05D005485 3.5e-61 240.7 529 39.3
Cpa.g.sc40.65 Carica papaya HOM05D004485 ORTHO05D005485 2.4e-54 218.0 146 80.8
SMO356G0242 Selaginella moellendorffii HOM05D004485 ORTHO05D005485 1.0e-52 212.6 561 35.5
Actinidia39786 Actinidia chinensis HOM05D004485 ORTHO05D005485 1.9e-51 208.4 440 38.6
Cpa.g.sc40.63 Carica papaya HOM05D004485 ORTHO05D005485 3.0e-49 201.1 458 52.4
Oeu064194.1 Olea europaea HOM05D004485 ORTHO05D005485 1.7e-39 168.7 443 36.1
CBR_g39203 Chara braunii HOM05D004485 ORTHO05D005485 4.9e-39 167.2 574 29.8
DCAR_012046 Daucus carota HOM05D004485 ORTHO05D005485 5.9e-37 160.2 338 41.7
SMO140G0037 Selaginella moellendorffii HOM05D004485 ORTHO05D005485 6.4e-31 140.2 478 35.1
Sc08g0007940 Simmondsia chinensis HOM05D004485 ORTHO05D005485 1.4e-30 139.0 206 48.1
Cpa.g.sc40.64 Carica papaya HOM05D004485 ORTHO05D005485 7.0e-30 136.7 86 88.4
SalBow3G4580 Salvia bowleyana HOM05D004485 ORTHO05D005485 6.0e-29 133.7 126 61.1
PGR102G1041 Punica granatum HOM05D004485 ORTHO05D005485 2.8e-26 124.8 222 44.1
Gohir.D01G081701 Gossypium hirsutum HOM05D004485 ORTHO05D005485 6.4e-23 113.6 68 89.7
Gohir.D04G126400 Gossypium hirsutum HOM05D004485 ORTHO05D005485 7.1e-22 110.2 70 87.1
Gohir.D05G357440 Gossypium hirsutum HOM05D004485 ORTHO05D005485 7.1e-22 110.2 70 87.1
Gohir.D05G357788 Gossypium hirsutum HOM05D004485 ORTHO05D005485 7.1e-22 110.2 70 87.1
Gorai.003G091600 Gossypium raimondii HOM05D004485 ORTHO05D005485 4.6e-21 107.5 72 81.9
arahy.Tifrunner.gnm1.ann1.SL9UG3 Arachis hypogaea HOM05D004485 ORTHO05D005485 1.5e-19 102.4 192 42.7
SHI02696 Sapria himalayana HOM05D004485 ORTHO05D005485 9.2e-14 83.2 388 28.9
HPP92_005577 Vanilla planifolia HOM05D004485 ORTHO05D005485 5.1e-12 77.4 65 64.6
A07p00710 Brassica napus HOM05D004485 ORTHO05D005485 9.6e-11 73.2 297 29.6
BcaC06g36663 Brassica carinata HOM05D004485 ORTHO05D005485 1.1e-09 69.7 243 30.0
Rhsim05G0040800 Rhododendron simsii HOM05D000602 ORTHO05D001147 6.8e-09 67.0 82 54.9
HanXRQChr10g0316161 Helianthus annuus HOM05D004485 ORTHO05D005485 4.4e-08 64.3 50 74.0
Sp1g16170 Schrenkiella parvula HOM05D004897 ORTHO05D005928 5.4e-06 57.4 200 26.0


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