Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN23G2505 Fragaria x ananassa HOM05D006529 ORTHO05D008380 5.4e-107 391.0 193 100.0
FvH4_1g06740 Fragaria vesca HOM05D006529 ORTHO05D008380 3.5e-106 388.3 193 99.0
FAN19G1593 Fragaria x ananassa HOM05D006529 ORTHO05D008380 3.5e-106 388.3 193 99.0
FAN14G0658 Fragaria x ananassa HOM05D006529 ORTHO05D008380 1.3e-100 369.8 192 94.3
RcHm_v2.0_Chr2g0092481 Rosa chinensis HOM05D006529 ORTHO05D008380 1.1e-91 340.1 191 84.8
Prupe.7G215100 Prunus persica HOM05D006529 ORTHO05D008380 3.0e-89 332.0 198 82.3
MD02G1072300 Malus domestica HOM05D006529 ORTHO05D008380 2.1e-87 325.9 198 80.3
MD15G1202100 Malus domestica HOM05D006529 ORTHO05D008380 1.7e-84 316.2 198 79.3
Cfa003138 Carpinus fangiana HOM05D006529 ORTHO05D008380 2.2e-84 315.8 192 77.6
CiPaw.04G153200 Carya illinoinensis HOM05D006529 ORTHO05D008380 7.4e-80 300.8 191 73.8
CSS0016193 Camellia sinensis var. sinensis HOM05D006529 ORTHO05D008380 5.3e-78 294.7 192 69.8
TAR624G0297 Trochodendron aralioides HOM05D006529 ORTHO05D008380 4.5e-77 291.6 193 70.5
Manes.16G105400 Manihot esculenta HOM05D006529 ORTHO05D008380 1.0e-76 290.4 198 69.2
QL02p063543 Quercus lobata HOM05D006529 ORTHO05D008380 1.7e-76 289.7 231 61.9
GSVIVG01015253001 Vitis vinifera HOM05D006529 ORTHO05D008380 3.8e-76 288.5 197 72.6
Dinv42286 Davidia involucrata HOM05D006529 ORTHO05D008380 1.9e-75 286.2 206 66.5
Haze_25864 Corylus avellana HOM05D006529 ORTHO05D008380 2.5e-75 285.8 192 73.4
Glyma.08G031000 Glycine max HOM05D006529 ORTHO05D008380 1.6e-74 283.1 194 70.1
Atru.chr7.1518 Acer truncatum HOM05D006529 ORTHO05D008380 2.1e-74 282.7 197 69.5
Duzib150G0994 Durio zibethinus HOM05D006529 ORTHO05D008380 2.1e-74 282.7 193 67.4
PGR142G1231 Punica granatum HOM05D006529 ORTHO05D008380 2.1e-74 282.7 199 67.8
CANSAT56G2962 Cannabis sativa HOM05D006529 ORTHO05D008380 3.6e-74 282.0 191 71.7
ClCG03G015880 Citrullus lanatus HOM05D006529 ORTHO05D008380 4.6e-74 281.6 198 65.7
Gohir.D05G029600 Gossypium hirsutum HOM05D006529 ORTHO05D008380 4.6e-74 281.6 193 66.8
Gorai.009G029800 Gossypium raimondii HOM05D006529 ORTHO05D008380 4.6e-74 281.6 193 66.8
Ca_17386_v3 Cicer arietinum L. HOM05D006529 ORTHO05D008380 7.9e-74 280.8 194 70.6
Gohir.A05G027800 Gossypium hirsutum HOM05D006529 ORTHO05D008380 7.9e-74 280.8 193 66.3
Cc06_g10920 Coffea canephora HOM05D006529 ORTHO05D008380 2.3e-73 279.3 195 67.7
Hund07265 Selenicereus undatus HOM05D006529 ORTHO05D008380 3.0e-73 278.9 198 67.2
Lj7C671T1 Lonicera japonica HOM05D006529 ORTHO05D008380 3.9e-73 278.5 210 65.2
COL.COLO4_18251 Corchorus olitorius HOM05D006529 ORTHO05D008380 6.7e-73 277.7 206 64.1
ECA240G3812 Erigeron canadensis HOM05D006529 ORTHO05D008380 6.7e-73 277.7 202 65.8
Glyma.05G223900 Glycine max HOM05D006529 ORTHO05D008380 6.7e-73 277.7 194 68.6
Lalb_Chr05g0223501 Lupinus albus HOM05D006529 ORTHO05D008380 8.8e-73 277.3 195 68.2
Ciclev10009577m.g Citrus clementina HOM05D006529 ORTHO05D008380 2.0e-72 276.2 194 70.1
Eucgr.C00932 Eucalyptus grandis HOM05D006529 ORTHO05D008380 2.5e-72 275.8 205 63.9
Thecc.09G094900 Theobroma cacao HOM05D006529 ORTHO05D008380 3.3e-72 275.4 200 65.5
AUR62000487 Chenopodium quinoa HOM05D006529 ORTHO05D008380 5.7e-72 274.6 197 66.0
AUR62006831 Chenopodium quinoa HOM05D006529 ORTHO05D008380 5.7e-72 274.6 197 67.0
Medtr8g101990 Medicago truncatula HOM05D006529 ORTHO05D008380 7.4e-72 274.2 195 67.7
Dinv36729 Davidia involucrata HOM05D006529 ORTHO05D008380 9.7e-72 273.9 199 65.8
FAN26G1500 Fragaria x ananassa HOM05D006529 ORTHO05D008380 2.2e-71 272.7 209 71.8
Lj4g0018594 Lotus japonicus HOM05D006529 ORTHO05D008380 2.2e-71 272.7 194 68.0
TWI63G1011 Tripterygium wilfordii HOM05D006529 ORTHO05D008380 6.3e-71 271.2 195 65.1
VMungo0251G0255 Vigna mungo HOM05D006529 ORTHO05D008380 6.3e-71 271.2 194 67.0
Ah.06g190810 Amaranthus hybridus HOM05D006529 ORTHO05D008380 1.8e-70 269.6 198 66.2
Potri.006G153800 Populus trichocarpa HOM05D006529 ORTHO05D008380 2.4e-70 269.2 196 65.8
Actinidia29893 Actinidia chinensis HOM05D006529 ORTHO05D008380 4.1e-70 268.5 213 63.8
arahy.Tifrunner.gnm1.ann1.YG2MQU Arachis hypogaea HOM05D006529 ORTHO05D008380 5.3e-70 268.1 195 66.2
Nitab4.5_0004011g0030 Nicotiana tabacum HOM05D006529 ORTHO05D008380 1.2e-69 266.9 198 63.6
arahy.Tifrunner.gnm1.ann1.HB8I5Y Arachis hypogaea HOM05D006529 ORTHO05D008380 3.4e-69 265.4 195 65.6
Aqoxy7G01329 Aquilegia oxysepala HOM05D006529 ORTHO05D008380 4.5e-69 265.0 197 66.0
vmacro06269 Vaccinium macrocarpon HOM05D006529 ORTHO05D008380 1.0e-68 263.8 201 64.7
THA.LOC104813489 Tarenaya hassleriana HOM05D006529 ORTHO05D008380 1.7e-68 263.1 196 64.3
Nn8g38953 Nelumbo nucifera HOM05D006529 ORTHO05D008380 2.9e-68 262.3 204 62.7
HanXRQChr09g0238511 Helianthus annuus HOM05D006529 ORTHO05D008380 6.5e-68 261.2 194 63.9
DCAR_012008 Daucus carota HOM05D006529 ORTHO05D008380 1.1e-67 260.4 206 60.7
A03p56550 Brassica napus HOM05D006529 ORTHO05D008380 1.9e-67 259.6 199 61.8
CAN.G142.8 Capsicum annuum HOM05D006529 ORTHO05D008380 1.9e-67 259.6 194 62.4
Psat7g019320 Pisum sativum HOM05D006529 ORTHO05D008380 1.6e-66 256.5 195 65.1
Sp7g24240 Schrenkiella parvula HOM05D006529 ORTHO05D008380 1.6e-66 256.5 197 61.9
PSO832G0687 Papaver somniferum HOM05D006529 ORTHO05D008380 2.1e-66 256.1 196 61.7
AL7G26720 Arabidopsis lyrata HOM05D006529 ORTHO05D008380 3.6e-66 255.4 197 61.4
Carub.0007s1471 Capsella rubella HOM05D006529 ORTHO05D008380 6.1e-66 254.6 197 61.4
Sed0011062 Sechium edule HOM05D006529 ORTHO05D008380 6.1e-66 254.6 192 62.0
Aqoxy199s004 Aquilegia oxysepala HOM05D006529 ORTHO05D008380 1.0e-65 253.8 190 65.3
AT4G26240 Arabidopsis thaliana HOM05D006529 ORTHO05D008380 1.0e-65 253.8 197 60.9
Thhalv10026289m.g Eutrema salsugineum HOM05D006529 ORTHO05D008380 1.0e-65 253.8 197 60.9
MELO3C015437.2 Cucumis melo HOM05D006529 ORTHO05D008380 1.4e-65 253.4 198 61.1
Nn6g35394 Nelumbo nucifera HOM05D006529 ORTHO05D008380 1.4e-65 253.4 202 60.9
CARHR233790 Cardamine hirsuta HOM05D006529 ORTHO05D008380 1.8e-65 253.1 197 59.9
C07p54750 Brassica napus HOM05D006529 ORTHO05D008380 3.0e-65 252.3 199 60.8
BolC7t45964H Brassica oleracea HOM05D006529 ORTHO05D008380 3.0e-65 252.3 199 60.8
CDE05G3131 Ceratophyllum demersum HOM05D006529 ORTHO05D008380 8.8e-65 250.8 192 57.8
Oeu052123.2 Olea europaea HOM05D006529 ORTHO05D008380 8.8e-65 250.8 219 58.0
MSTRG.10586 Avicennia marina HOM05D006529 ORTHO05D008380 1.1e-64 250.4 195 61.0
CSS0046887 Camellia sinensis var. sinensis HOM05D006529 ORTHO05D008380 1.1e-64 250.4 199 62.3
BraA03t14725Z Brassica rapa HOM05D006529 ORTHO05D008380 2.0e-64 249.6 200 60.0
PSO063G6648 Papaver somniferum HOM05D006529 ORTHO05D008380 3.3e-64 248.8 196 60.2
Phvul.002G305700 Phaseolus vulgaris HOM05D006529 ORTHO05D008380 3.3e-64 248.8 194 63.4
BcaC06g32765 Brassica carinata HOM05D006529 ORTHO05D008380 4.4e-64 248.4 201 60.7
Migut.K00572 Erythranthe guttata HOM05D006529 ORTHO05D008380 1.5e-61 240.0 196 58.7
SGA_v2.0_scaffold210G42089 Striga asiatica HOM05D006529 ORTHO05D008380 6.5e-60 234.6 186 61.3
SalBow1G6632 Salvia bowleyana HOM05D006529 ORTHO05D008380 9.4e-59 230.7 226 51.8
CsaV3_UNG050340 Cucumis sativus L. HOM05D006529 ORTHO05D008380 1.5e-56 223.4 135 69.6
TPR.G17281 Trifolium pratense HOM05D006529 ORTHO05D008380 2.6e-56 222.6 142 68.3
Os01g0559300 Oryza sativa ssp. japonica HOM05D006529 ORTHO05D008380 4.1e-54 215.3 170 58.8
Zm00001eb356780 Zea mays HOM05D006529 ORTHO05D008380 5.9e-53 211.5 165 59.4
CANSAT56G3512 Cannabis sativa HOM05D006529 ORTHO05D008380 5.5e-51 204.9 178 60.7
Lsat_1_v5_gn_7_38121 Lactuca sativa HOM05D006529 ORTHO05D008380 1.2e-50 203.8 148 62.8
Peaxi162Scf00883g01013 Petunia axillaris HOM05D006529 ORTHO05D008380 4.0e-49 198.7 201 51.7
FAN26G3434 Fragaria x ananassa HOM05D006529 ORTHO05D008380 1.4e-46 190.3 131 74.0
Cpa.g.sc78.59 Carica papaya HOM05D006529 ORTHO05D008380 1.9e-43 179.9 186 53.8
CsaV3_1G040070 Cucumis sativus L. HOM05D006529 ORTHO05D008380 1.6e-42 176.8 163 52.1
Sc18g0001790 Simmondsia chinensis HOM05D006529 ORTHO05D008380 1.5e-40 170.2 148 57.4
Aa31LG3G600 Aethionema arabicum HOM05D006529 ORTHO05D008380 7.5e-40 167.9 195 48.2
SalBow1G6389 Salvia bowleyana HOM05D006529 ORTHO05D008380 4.2e-35 152.1 119 55.5
FAN27G1398 Fragaria x ananassa HOM05D006529 ORTHO05D008380 2.6e-32 142.9 82 87.8
HanXRQChr03g0061021 Helianthus annuus HOM05D006529 ORTHO05D008380 2.4e-30 136.3 106 59.4
SHI02792 Sapria himalayana HOM05D006529 ORTHO05D008380 1.1e-27 127.5 115 50.4
SMO164G0011 Selaginella moellendorffii HOM05D006529 ORTHO05D008380 4.0e-25 119.0 165 37.0
CBR_g10883 Chara braunii HOM05D006529 ORTHO05D008380 2.0e-24 116.7 169 39.1
Lalb_Chr09g0331701 Lupinus albus HOM05D006529 ORTHO05D008380 4.4e-24 115.5 69 72.5
HPP92_005506 Vanilla planifolia HOM05D006529 ORTHO05D008380 4.9e-23 112.1 153 41.8
Sabra06G0122000 Salix brachista HOM05D006529 ORTHO05D008380 3.0e-20 102.8 97 56.7
Sabra06G0121800 Salix brachista HOM05D006529 ORTHO05D008380 6.2e-18 95.1 56 75.0
Nitab4.5_0009098g0020 Nicotiana tabacum HOM05D006529 ORTHO05D008380 2.3e-17 93.2 86 58.1
SHI02791 Sapria himalayana HOM05D006529 ORTHO05D008380 1.7e-15 87.0 49 71.4
FAN02G1845 Fragaria x ananassa HOM05D000599 ORTHO05D000554 4.9e-15 85.5 90 55.6
HanXRQChr03g0061031 Helianthus annuus HOM05D006529 ORTHO05D008380 3.5e-13 79.3 86 52.3
RcHm_v2.0_Chr7g0226351 Rosa chinensis HOM05D006529 ORTHO05D008380 2.3e-12 76.6 54 74.1
Lalb_Chr09g0331711 Lupinus albus HOM05D006529 ORTHO05D008380 2.0e-08 63.5 45 62.2
Sopen08g011810 Solanum pennellii HOM05D006529 ORTHO05D008380 1.3e-07 60.8 73 42.5
PGSC0003DMG400015618 Solanum tuberosum HOM05D006529 ORTHO05D008380 1.1e-06 57.8 77 48.1
Solyc08g041690.1 Solanum lycopersicum HOM05D006529 ORTHO05D008380 1.4e-06 57.4 34 73.5


User provided reference genes

Program Settings