Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN23G2403 Fragaria x ananassa HOM05D008040 ORTHO05D010075 1.7e-301 1038.5 492 100.0
FAN26G0836 Fragaria x ananassa HOM05D008040 ORTHO05D010075 3.6e-272 941.0 520 87.7
FvH4_1g14071 Fragaria vesca HOM05D008040 ORTHO05D010075 1.4e-271 939.1 520 87.7
FAN19G2417 Fragaria x ananassa HOM05D008040 ORTHO05D010075 3.4e-270 934.5 520 86.9
RcHm_v2.0_Chr2g0102901 Rosa chinensis HOM05D008040 ORTHO05D010075 5.2e-146 521.9 435 63.0
RcHm_v2.0_Chr2g0102561 Rosa chinensis HOM05D008040 ORTHO05D010075 5.4e-135 485.3 506 54.0
FAN28G1672 Fragaria x ananassa HOM05D008040 ORTHO05D010075 1.0e-125 454.5 266 83.5
FAN19G2662 Fragaria x ananassa HOM05D008040 ORTHO05D010075 1.7e-112 410.6 366 61.2
FAN28G2855 Fragaria x ananassa HOM05D008040 ORTHO05D010075 2.2e-112 410.2 220 89.5
FvH4_1g14191 Fragaria vesca HOM05D008040 ORTHO05D010075 1.9e-100 370.5 520 46.2
Prupe.7G151200 Prunus persica HOM05D008040 ORTHO05D010075 7.7e-65 252.3 482 38.0
MD12G1211200 Malus domestica HOM05D008040 ORTHO05D010075 1.0e-64 251.9 497 38.4
MD12G1051600 Malus domestica HOM05D008040 ORTHO05D010075 2.4e-58 230.7 395 38.7
EL10Ac2g04156 Beta vulgaris HOM05D008040 ORTHO05D010075 2.6e-36 157.5 386 32.1
Sabra08G0010200 Salix brachista HOM05D008040 ORTHO05D010075 8.3e-35 152.5 383 29.5
QL04p017640 Quercus lobata HOM05D008040 ORTHO05D010075 2.9e-32 144.1 411 29.9
QL04p017690 Quercus lobata HOM05D008040 ORTHO05D010075 2.9e-32 144.1 410 29.5
AUR62035995 Chenopodium quinoa HOM05D008040 ORTHO05D010075 1.6e-30 138.3 379 29.3
AUR62017713 Chenopodium quinoa HOM05D008040 ORTHO05D010075 2.8e-30 137.5 390 29.7
COL.COLO4_12486 Corchorus olitorius HOM05D008040 ORTHO05D010075 1.4e-29 135.2 397 29.2
Potri.013G110300 Populus trichocarpa HOM05D008040 ORTHO05D010075 3.1e-29 134.0 380 29.7
Potri.013G109900 Populus trichocarpa HOM05D008040 ORTHO05D010075 6.8e-29 132.9 386 29.5
COL.COLO4_31563 Corchorus olitorius HOM05D008040 ORTHO05D010075 4.4e-28 130.2 378 28.3
COL.COLO4_31566 Corchorus olitorius HOM05D008040 ORTHO05D010075 5.8e-28 129.8 435 28.0
Oeu009728.1 Olea europaea HOM05D008040 ORTHO05D010075 7.5e-28 129.4 288 33.0
TWI77G0815 Tripterygium wilfordii HOM05D008040 ORTHO05D010075 3.7e-27 127.1 435 28.7
COL.COLO4_30844 Corchorus olitorius HOM05D008040 ORTHO05D010075 1.1e-26 125.6 380 29.2
CSS0013591 Camellia sinensis var. sinensis HOM05D008040 ORTHO05D010075 5.4e-26 123.2 389 31.9
AUR62008579 Chenopodium quinoa HOM05D008040 ORTHO05D010075 1.2e-25 122.1 396 27.3
CSS0010874 Camellia sinensis var. sinensis HOM05D008040 ORTHO05D010075 2.0e-25 121.3 389 31.6
COL.COLO4_31567 Corchorus olitorius HOM05D008040 ORTHO05D010075 3.5e-25 120.6 374 28.1
CSS0016313 Camellia sinensis var. sinensis HOM05D008040 ORTHO05D010075 7.8e-25 119.4 431 29.5
COL.COLO4_31564 Corchorus olitorius HOM05D008040 ORTHO05D010075 3.9e-24 117.1 400 28.2
COL.COLO4_10414 Corchorus olitorius HOM05D008040 ORTHO05D010075 5.0e-24 116.7 391 28.1
SGA_v2.0_scaffold286G47111 Striga asiatica HOM05D008040 ORTHO05D010075 1.5e-23 115.2 430 28.1
Manes.09G072126 Manihot esculenta HOM05D008040 ORTHO05D010075 2.5e-23 114.4 380 25.5
vmacro17325 Vaccinium macrocarpon HOM05D008040 ORTHO05D010075 4.3e-23 113.6 319 30.1
Oeu009732.1 Olea europaea HOM05D001586 ORTHO05D001543 6.2e-22 109.8 278 30.2
TWI12G0677 Tripterygium wilfordii HOM05D008040 ORTHO05D010075 8.1e-22 109.4 415 26.0
Ciclev10006596m.g Citrus clementina HOM05D008040 ORTHO05D010075 1.4e-21 108.6 395 28.1
MD15G1268400 Malus domestica HOM05D008040 ORTHO05D010075 2.3e-21 107.8 213 38.0
SGA_v2.0_scaffold286G47115 Striga asiatica HOM05D008040 ORTHO05D010075 3.1e-21 107.5 298 29.9
CSS0049849 Camellia sinensis var. sinensis HOM05D008040 ORTHO05D010075 4.0e-21 107.1 391 30.2
vmacro17323 Vaccinium macrocarpon HOM05D008040 ORTHO05D010075 3.4e-20 104.0 234 34.2
TWI12G0410 Tripterygium wilfordii HOM05D008040 ORTHO05D010075 1.7e-19 101.7 436 25.0
Ah.07g206250 Amaranthus hybridus HOM05D008040 ORTHO05D010075 2.2e-19 101.3 366 25.4
SGA_v2.0_scaffold147G36326 Striga asiatica HOM05D008040 ORTHO05D010075 4.9e-19 100.1 261 30.3
Ciclev10026974m.g Citrus clementina HOM05D008040 ORTHO05D010075 6.4e-19 99.8 260 29.2
Aqoxy6G00905 Aquilegia oxysepala HOM05D008040 ORTHO05D010075 1.9e-18 98.2 389 25.4
PSO761G0098 Papaver somniferum HOM05D008040 ORTHO05D010075 1.7e-16 91.7 288 27.4
COL.COLO4_10419 Corchorus olitorius HOM05D026534 ORTHO05D010075 8.6e-16 89.4 397 23.4
PSO339G3463 Papaver somniferum HOM05D008040 ORTHO05D010075 7.3e-15 86.3 262 29.0
Sabra08G0010400 Salix brachista HOM05D008040 ORTHO05D010075 9.5e-15 85.9 224 29.0
Ah.06g196070 Amaranthus hybridus HOM05D008040 ORTHO05D010075 8.1e-14 82.8 244 30.3
Ah.02g122840 Amaranthus hybridus HOM05D008040 ORTHO05D010075 6.8e-13 79.7 223 28.7
DCAR_021781 Daucus carota HOM05D008040 ORTHO05D010075 2.0e-12 78.2 213 29.6
vmacro17324 Vaccinium macrocarpon HOM05D008040 ORTHO05D010075 2.0e-12 78.2 231 29.9
Rhsim08G0168000 Rhododendron simsii HOM05D000664 ORTHO05D000491 4.4e-12 77.0 299 25.1
Potri.013G109701 Populus trichocarpa HOM05D008040 ORTHO05D010075 1.3e-11 75.5 197 29.9
Potri.008G016300 Populus trichocarpa HOM05D008040 ORTHO05D010075 1.4e-10 72.0 186 30.6
Dinv26463 Davidia involucrata HOM05D000664 ORTHO05D000491 1.9e-10 71.6 296 26.7
Rhsim03G0249000 Rhododendron simsii HOM05D000664 ORTHO05D000491 1.9e-10 71.6 216 30.1
Duzib205G1254 Durio zibethinus HOM05D000664 ORTHO05D000491 3.2e-10 70.9 181 32.0
PSO017G2897 Papaver somniferum HOM05D008040 ORTHO05D010075 9.2e-10 69.3 248 28.2
CDE04G2855 Ceratophyllum demersum HOM05D000664 ORTHO05D000491 1.6e-09 68.6 249 26.1
Rhsim01G0013600 Rhododendron simsii HOM05D000664 ORTHO05D000491 4.6e-09 67.0 162 29.0
SGA_v2.0_scaffold136G35030 Striga asiatica HOM05D000664 ORTHO05D000491 1.3e-08 65.5 202 27.2
SGA_v2.0_scaffold136G35012 Striga asiatica HOM05D000664 ORTHO05D000491 1.7e-08 65.1 203 26.6
Potri.008G016150 Populus trichocarpa HOM05D008040 ORTHO05D010075 2.3e-08 64.7 74 45.9
Medtr3g011190 Medicago truncatula HOM05D011629 ORTHO05D013267 3.9e-08 63.9 311 24.4
CSS0031414 Camellia sinensis var. sinensis HOM05D000664 ORTHO05D000491 5.1e-08 63.5 94 41.5
Rhsim01G0016900 Rhododendron simsii HOM05D000664 ORTHO05D000491 6.6e-08 63.2 212 28.8
Ciclev10006867m.g Citrus clementina HOM05D000664 ORTHO05D000491 8.6e-08 62.8 91 39.6
Lj2P385T13 Lonicera japonica HOM05D000664 ORTHO05D000491 1.1e-07 62.4 215 28.4
Cfa020730 Carpinus fangiana HOM05D000664 ORTHO05D000491 1.5e-07 62.0 279 27.6
Os01g0876300 Oryza sativa ssp. japonica HOM05D000664 ORTHO05D000491 1.5e-07 62.0 151 28.5
RcHm_v2.0_Chr4g0388051 Rosa chinensis HOM05D000664 ORTHO05D000491 1.5e-07 62.0 111 35.1
vmacro06138 Vaccinium macrocarpon HOM05D000664 ORTHO05D000491 1.5e-07 62.0 214 27.6
Rhsim01G0013800 Rhododendron simsii HOM05D000664 ORTHO05D000491 2.5e-07 61.2 280 23.9
Rhsim03G0248800 Rhododendron simsii HOM05D000664 ORTHO05D000491 2.5e-07 61.2 90 40.0
RhsimUnG0091900 Rhododendron simsii HOM05D000664 ORTHO05D000491 2.5e-07 61.2 226 26.5
FAN27G2908 Fragaria x ananassa HOM05D000664 ORTHO05D000491 3.3e-07 60.8 305 23.9
Gohir.D12G199200 Gossypium hirsutum HOM05D000664 ORTHO05D000491 3.3e-07 60.8 153 27.5
Rhsim01G0017000 Rhododendron simsii HOM05D000664 ORTHO05D000491 4.3e-07 60.5 295 23.1
FvH4_6g02171 Fragaria vesca HOM05D001729 ORTHO05D001155 5.6e-07 60.1 265 26.8
Rhsim01G0013700 Rhododendron simsii HOM05D000664 ORTHO05D000491 5.6e-07 60.1 160 28.8
Migut.J01669 Erythranthe guttata HOM05D000664 ORTHO05D000491 7.3e-07 59.7 261 23.4
PSO675G6708 Papaver somniferum HOM05D008326 ORTHO05D001155 7.3e-07 59.7 229 24.0
Gohir.A11G185100 Gossypium hirsutum HOM05D002420 ORTHO05D002422 1.2e-06 58.9 196 24.5
Gorai.008G214400 Gossypium raimondii HOM05D000664 ORTHO05D000491 1.2e-06 58.9 153 26.8
Rhsim01G0018000 Rhododendron simsii HOM05D000664 ORTHO05D000491 1.6e-06 58.5 277 24.9
Rhsim08G0219900 Rhododendron simsii HOM05D001729 ORTHO05D001155 1.6e-06 58.5 224 27.2
Atru.chr4.13 Acer truncatum HOM05D000007 ORTHO05D000521 2.1e-06 58.2 216 26.9
FAN17G1555 Fragaria x ananassa HOM05D000664 ORTHO05D000491 2.1e-06 58.2 110 35.5
Aqoxy3G00584 Aquilegia oxysepala HOM05D008040 ORTHO05D010075 2.8e-06 57.8 204 24.5
CDE06G0907 Ceratophyllum demersum HOM05D000855 ORTHO05D000491 2.8e-06 57.8 250 23.6
MBI05_g20724_MAGBIO Magnolia biondii HOM05D000664 ORTHO05D000491 2.8e-06 57.8 208 28.8
Os08g0529300 Oryza sativa ssp. japonica HOM05D000664 ORTHO05D000491 2.8e-06 57.8 256 24.6
Psat2g144440 Pisum sativum HOM05D011629 ORTHO05D013267 2.8e-06 57.8 130 30.8
QL11p009094 Quercus lobata HOM05D001729 ORTHO05D001155 2.8e-06 57.8 225 26.2
Rhsim01G0013900 Rhododendron simsii HOM05D000664 ORTHO05D000491 2.8e-06 57.8 102 36.3
FvH4_1g29150 Fragaria vesca HOM05D000007 ORTHO05D000521 3.6e-06 57.4 213 25.8
FvH4_6g53072 Fragaria vesca HOM05D000664 ORTHO05D000491 3.6e-06 57.4 115 38.3
FAN22G0195 Fragaria x ananassa HOM05D000664 ORTHO05D035745 3.6e-06 57.4 110 34.5
QL04p017704 Quercus lobata HOM05D008040 ORTHO05D010075 3.6e-06 57.4 106 34.0
Rhsim08G0238800 Rhododendron simsii HOM05D001729 ORTHO05D001155 3.6e-06 57.4 221 26.7
Rhsim11G0068800 Rhododendron simsii HOM05D000664 ORTHO05D000491 3.6e-06 57.4 164 29.9
FvH4_2g35920 Fragaria vesca HOM05D000664 ORTHO05D000491 4.7e-06 57.0 107 32.7
FAN14G3142 Fragaria x ananassa HOM05D000664 ORTHO05D000491 4.7e-06 57.0 147 35.4
RcHm_v2.0_Chr4g0388661 Rosa chinensis HOM05D000664 ORTHO05D000491 4.7e-06 57.0 117 35.9
Sabra09G0127200 Salix brachista HOM05D001729 ORTHO05D001155 4.7e-06 57.0 218 25.2
TAR626G1239 Trochodendron aralioides HOM05D000664 ORTHO05D000491 4.7e-06 57.0 162 29.0
Psat5g225280 Pisum sativum HOM05D011629 ORTHO05D013267 6.2e-06 56.6 143 32.2
Atru.chr1.895 Acer truncatum HOM05D000664 ORTHO05D000491 8.1e-06 56.2 146 26.0
Haze_19047 Corylus avellana HOM05D000664 ORTHO05D000491 8.1e-06 56.2 279 26.5


User provided reference genes

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