Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN23G2338 Fragaria x ananassa HOM05D007850 ORTHO05D009594 2.9e-55 218.4 114 100.0
FAN26G0602 Fragaria x ananassa HOM05D007850 ORTHO05D009594 6.6e-36 154.1 78 98.7
FAN26G2005 Fragaria x ananassa HOM05D007850 ORTHO05D009594 6.6e-36 154.1 78 98.7
FvH4_1g06390 Fragaria vesca HOM05D007850 ORTHO05D009594 1.5e-35 152.9 78 97.4
FAN19G1200 Fragaria x ananassa HOM05D007850 ORTHO05D009594 1.5e-35 152.9 78 97.4
FAN28G1089 Fragaria x ananassa HOM05D007850 ORTHO05D009594 1.5e-35 152.9 78 97.4
RcHm_v2.0_Chr2g0092131 Rosa chinensis HOM05D007850 ORTHO05D009594 1.8e-33 146.0 77 94.8
Prupe.7G218200 Prunus persica HOM05D007850 ORTHO05D009594 5.8e-24 114.4 75 77.3
Duzib168G0149 Durio zibethinus HOM05D007850 ORTHO05D009594 4.3e-19 98.2 69 73.9
Gohir.D06G066600 Gossypium hirsutum HOM05D007850 ORTHO05D009594 9.6e-19 97.1 70 67.1
Gorai.010G078100 Gossypium raimondii HOM05D007850 ORTHO05D009594 4.8e-18 94.7 70 65.7
CANSAT56G2953 Cannabis sativa HOM05D007850 ORTHO05D009594 6.2e-18 94.4 68 73.5
Gohir.A06G068000 Gossypium hirsutum HOM05D007850 ORTHO05D009594 8.1e-18 94.0 70 68.6
Gohir.D07G009300 Gossypium hirsutum HOM05D007850 ORTHO05D009594 8.1e-18 94.0 69 68.1
Gorai.001G009500 Gossypium raimondii HOM05D007850 ORTHO05D009594 8.1e-18 94.0 69 68.1
Cfa003164 Carpinus fangiana HOM05D007850 ORTHO05D009594 1.1e-17 93.6 75 68.0
Gohir.A07G009000 Gossypium hirsutum HOM05D007850 ORTHO05D009594 1.4e-17 93.2 69 68.1
Thecc.09G099000 Theobroma cacao HOM05D007850 ORTHO05D009594 1.8e-17 92.8 69 71.0
Potri.015G106700 Populus trichocarpa HOM05D007850 ORTHO05D009594 2.4e-17 92.4 73 63.0
Manes.03G028100 Manihot esculenta HOM05D007850 ORTHO05D009594 4.0e-17 91.7 75 65.3
Haze_25835 Corylus avellana HOM05D007850 ORTHO05D009594 5.3e-17 91.3 75 66.7
Gohir.D08G264200 Gossypium hirsutum HOM05D007850 ORTHO05D009594 5.3e-17 91.3 76 64.5
Gorai.004G282100 Gossypium raimondii HOM05D007850 ORTHO05D009594 5.3e-17 91.3 76 64.5
Gohir.A08G243300 Gossypium hirsutum HOM05D007850 ORTHO05D009594 4.5e-16 88.2 76 63.2
Sabra12G0079700 Salix brachista HOM05D007850 ORTHO05D009594 4.5e-16 88.2 69 65.2
Cpa.g.sc78.26 Carica papaya HOM05D007850 ORTHO05D009594 5.8e-16 87.8 70 62.9
Lalb_Chr22g0352511 Lupinus albus HOM05D007850 ORTHO05D009594 9.9e-16 87.0 66 65.2
ClCG03G016060 Citrullus lanatus HOM05D007850 ORTHO05D009594 2.2e-15 85.9 74 67.6
Nn8g39046 Nelumbo nucifera HOM05D007850 ORTHO05D009594 2.9e-15 85.5 76 59.2
MELO3C015421.2 Cucumis melo HOM05D007850 ORTHO05D009594 3.8e-15 85.1 78 60.3
Hma1.2p1_0208F.1_g088080 Hydrangea macrophylla HOM05D007850 ORTHO05D009594 8.4e-15 84.0 71 66.2
Eucgr.K01055 Eucalyptus grandis HOM05D007850 ORTHO05D009594 3.2e-14 82.0 86 58.1
Rhsim05G0038300 Rhododendron simsii HOM05D007850 ORTHO05D009594 3.2e-14 82.0 74 59.5
arahy.Tifrunner.gnm1.ann1.X02Y3Q Arachis hypogaea HOM05D007850 ORTHO05D009594 4.2e-14 81.6 73 56.2
Psat1g048160 Pisum sativum HOM05D007850 ORTHO05D009594 7.1e-14 80.9 73 57.5
arahy.Tifrunner.gnm1.ann1.X1KXE8 Arachis hypogaea HOM05D012186 ORTHO05D009594 1.2e-13 80.1 102 50.0
Cc06_g10600 Coffea canephora HOM05D007850 ORTHO05D009594 2.1e-13 79.3 73 57.5
Glyma.07G125500 Glycine max HOM05D007850 ORTHO05D009594 2.1e-13 79.3 73 58.9
SalBow6G1226 Salvia bowleyana HOM05D007850 ORTHO05D009594 3.5e-13 78.6 74 60.8
Actinidia17514 Actinidia chinensis HOM05D007850 ORTHO05D009594 4.6e-13 78.2 67 61.2
Ca_25585_v3 Cicer arietinum L. HOM05D007850 ORTHO05D009594 7.9e-13 77.4 73 54.8
QL08p048105 Quercus lobata HOM05D007850 ORTHO05D009594 7.9e-13 77.4 75 61.3
Glyma.01G006200 Glycine max HOM05D007850 ORTHO05D009594 1.0e-12 77.0 73 58.9
TAR624G0098 Trochodendron aralioides HOM05D007850 ORTHO05D009594 1.3e-12 76.6 78 55.1
AUR62010878 Chenopodium quinoa HOM05D007850 ORTHO05D009594 1.8e-12 76.3 74 58.1
CSS0000041 Camellia sinensis var. sinensis HOM05D007850 ORTHO05D009594 3.0e-12 75.5 75 62.7
Nitab4.5_0003079g0010 Nicotiana tabacum HOM05D007850 ORTHO05D009594 3.9e-12 75.1 69 60.9
TPR.G33528 Trifolium pratense HOM05D007850 ORTHO05D009594 3.9e-12 75.1 76 53.9
AUR62021391 Chenopodium quinoa HOM05D007850 ORTHO05D009594 5.1e-12 74.7 74 56.8
Phvul.004G174800 Phaseolus vulgaris HOM05D007850 ORTHO05D009594 5.1e-12 74.7 70 60.0
QL03p050300 Quercus lobata HOM05D007850 ORTHO05D009594 1.1e-11 73.6 69 60.9
Nitab4.5_0000566g0200 Nicotiana tabacum HOM05D007850 ORTHO05D009594 1.5e-11 73.2 75 56.0
COL.COLO4_34726 Corchorus olitorius HOM05D007850 ORTHO05D009594 2.5e-11 72.4 56 69.6
Ciclev10010071m.g Citrus clementina HOM05D007850 ORTHO05D009594 9.6e-11 70.5 74 58.1
CsaV3_1G039900 Cucumis sativus L. HOM05D007850 ORTHO05D009594 2.1e-10 69.3 63 61.9
Medtr6g090490 Medicago truncatula HOM05D007850 ORTHO05D009594 2.1e-10 69.3 74 54.1
Lj2g0008653 Lotus japonicus HOM05D007850 ORTHO05D009594 3.6e-10 68.6 78 51.3
Ciclev10006350m.g Citrus clementina HOM05D007850 ORTHO05D009594 6.2e-10 67.8 71 57.7
Sed0003200 Sechium edule HOM05D007850 ORTHO05D009594 8.1e-10 67.4 67 62.7
Peaxi162Scf00944g00009 Petunia axillaris HOM05D007850 ORTHO05D009594 1.1e-09 67.0 83 49.4
Sc18g0001560 Simmondsia chinensis HOM05D007850 ORTHO05D009594 1.1e-09 67.0 54 63.0
unitig_8.g4473 Utricularia gibba HOM05D007850 ORTHO05D009594 1.4e-09 66.6 68 58.8
Solyc12g008560.1 Solanum lycopersicum HOM05D007850 ORTHO05D009594 2.4e-09 65.9 69 55.1
EL10Ac8g18368 Beta vulgaris HOM05D007850 ORTHO05D009594 4.0e-09 65.1 74 50.0
PGSC0003DMG400000292 Solanum tuberosum HOM05D007850 ORTHO05D009594 5.3e-09 64.7 71 53.5
Aqoxy7G01385 Aquilegia oxysepala HOM05D007850 ORTHO05D009594 6.9e-09 64.3 77 48.1
CAN.G2021.4 Capsicum annuum HOM05D007850 ORTHO05D009594 1.5e-08 63.2 93 40.9
SEGI_13362 Sequoiadendron giganteum HOM05D007850 ORTHO05D009594 1.5e-08 63.2 76 47.4
Ah.09g230500 Amaranthus hybridus HOM05D007850 ORTHO05D009594 3.4e-08 62.0 77 48.1
CAN.G1591.18 Capsicum annuum HOM05D007850 ORTHO05D009594 3.4e-08 62.0 76 46.1
Lsat_1_v5_gn_7_39541 Lactuca sativa HOM05D007850 ORTHO05D009594 1.3e-07 60.1 52 59.6
CAN.G1677.12 Capsicum annuum HOM05D007850 ORTHO05D009594 2.2e-07 59.3 76 44.7
Sopen12g003500 Solanum pennellii HOM05D007850 ORTHO05D009594 2.2e-07 59.3 61 52.5
DCAR_000091 Daucus carota HOM05D007850 ORTHO05D009594 2.9e-07 58.9 75 48.0
DCAR_012032 Daucus carota HOM05D007850 ORTHO05D009594 2.9e-07 58.9 75 48.0
DCAR_012035 Daucus carota HOM05D007850 ORTHO05D009594 2.9e-07 58.9 75 48.0
CAN.G1357.32 Capsicum annuum HOM05D007850 ORTHO05D009594 4.9e-07 58.2 76 44.7
ATR0705G131 Amborella trichopoda HOM05D007850 ORTHO05D009594 1.9e-06 56.2 73 43.8
CAN.G1349.15 Capsicum annuum HOM05D007850 ORTHO05D009594 1.9e-06 56.2 76 43.4
CAN.G1084.1 Capsicum annuum HOM05D007850 ORTHO05D009594 3.2e-06 55.5 76 43.4
ECA240G2374 Erigeron canadensis HOM05D004751 ORTHO05D005819 7.1e-06 54.3 61 54.1


User provided reference genes

Program Settings