Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN23G2336 Fragaria x ananassa HOM05D007800 ORTHO05D009881 4.9e-274 947.2 484 100.0
FAN19G0334 Fragaria x ananassa HOM05D007800 ORTHO05D009881 1.1e-270 936.0 484 99.0
FvH4_1g07200 Fragaria vesca HOM05D007800 ORTHO05D009881 6.9e-268 926.8 479 99.0
RcHm_v2.0_Chr2g0093101 Rosa chinensis HOM05D007800 ORTHO05D009881 1.0e-231 806.6 481 86.1
FAN26G1329 Fragaria x ananassa HOM05D007800 ORTHO05D009881 5.7e-206 721.1 408 91.2
FAN26G3078 Fragaria x ananassa HOM05D007800 ORTHO05D009881 1.8e-204 716.1 408 90.7
Prupe.7G211900 Prunus persica HOM05D007800 ORTHO05D009881 3.0e-194 682.2 488 71.5
MD02G1076500 Malus domestica HOM05D007800 ORTHO05D009881 7.8e-187 657.5 488 69.5
Cfa003104 Carpinus fangiana HOM05D007800 ORTHO05D009881 1.6e-171 606.7 487 63.4
QL02p062921 Quercus lobata HOM05D007800 ORTHO05D009881 7.3e-169 597.8 487 63.4
Haze_25896 Corylus avellana HOM05D007800 ORTHO05D009881 2.8e-168 595.9 489 62.6
GSVIVG01015219001 Vitis vinifera HOM05D007800 ORTHO05D009881 9.9e-166 587.4 480 61.5
CANSAT56G2700 Cannabis sativa HOM05D007800 ORTHO05D009881 6.9e-159 564.7 486 60.5
CSS0047448 Camellia sinensis var. sinensis HOM05D007800 ORTHO05D009881 4.6e-155 552.0 488 59.6
CSS0040388 Camellia sinensis var. sinensis HOM05D007800 ORTHO05D009881 1.5e-153 547.0 488 58.8
Duzib150G1500 Durio zibethinus HOM05D007800 ORTHO05D009881 5.3e-151 538.5 492 56.5
CiPaw.03G217600 Carya illinoinensis HOM05D007800 ORTHO05D009881 4.5e-150 535.4 487 58.9
Actinidia03799 Actinidia chinensis HOM05D007800 ORTHO05D009881 1.1e-148 530.8 482 57.1
Gorai.010G081900 Gossypium raimondii HOM05D007800 ORTHO05D009881 5.5e-148 528.5 488 57.4
TWI32G0405 Tripterygium wilfordii HOM05D007800 ORTHO05D009881 2.1e-147 526.6 485 55.3
Ciclev10010231m.g Citrus clementina HOM05D007800 ORTHO05D009881 1.0e-146 524.2 490 55.7
Dinv36755 Davidia involucrata HOM05D007800 ORTHO05D009881 2.3e-146 523.1 481 57.6
Gohir.A06G071700 Gossypium hirsutum HOM05D007800 ORTHO05D009881 3.9e-146 522.3 488 56.6
Cpa.g.sc93.18 Carica papaya HOM05D007800 ORTHO05D009881 5.7e-145 518.5 495 55.4
FAN28G0657 Fragaria x ananassa HOM05D007800 ORTHO05D009881 5.7e-145 518.5 300 89.3
TAR626G0221 Trochodendron aralioides HOM05D007800 ORTHO05D009881 6.3e-144 515.0 489 55.6
Potri.006G151500 Populus trichocarpa HOM05D007800 ORTHO05D009881 1.4e-143 513.8 493 54.4
Hma1.2p1_0800F.1_g220040 Hydrangea macrophylla HOM05D007800 ORTHO05D009881 2.6e-142 509.6 487 53.6
Nitab4.5_0010222g0010 Nicotiana tabacum HOM05D007800 ORTHO05D009881 4.5e-142 508.8 482 55.6
Eucgr.C00905 Eucalyptus grandis HOM05D007800 ORTHO05D009881 7.6e-142 508.1 491 55.6
Sabra06G0120000 Salix brachista HOM05D007800 ORTHO05D009881 2.3e-138 496.5 484 54.5
Nitab4.5_0010434g0010 Nicotiana tabacum HOM05D007800 ORTHO05D009881 3.3e-137 492.7 483 55.3
Oeu018234.1 Olea europaea HOM05D007800 ORTHO05D009881 9.7e-137 491.1 484 52.7
PGSC0003DMG400002319 Solanum tuberosum HOM05D007800 ORTHO05D009881 6.3e-136 488.4 484 53.7
MSTRG.19524 Avicennia marina HOM05D007800 ORTHO05D009881 8.2e-136 488.0 487 54.6
Cc06_g11240 Coffea canephora HOM05D007800 ORTHO05D009881 5.0e-133 478.8 488 52.0
Aqoxy7G01245 Aquilegia oxysepala HOM05D007800 ORTHO05D009881 1.9e-132 476.9 506 51.2
Solyc07g026640.3 Solanum lycopersicum HOM05D007800 ORTHO05D009881 3.2e-132 476.1 483 52.8
PGR142G2964 Punica granatum HOM05D007800 ORTHO05D009881 1.2e-131 474.2 489 51.3
Sopen07g014250 Solanum pennellii HOM05D007800 ORTHO05D009881 1.2e-131 474.2 483 53.2
Manes.16G103100 Manihot esculenta HOM05D007800 ORTHO05D009881 5.1e-130 468.8 407 58.5
Migut.K00591 Erythranthe guttata HOM05D007800 ORTHO05D009881 3.3e-129 466.1 485 50.5
HanXRQChr03g0060771 Helianthus annuus HOM05D007800 ORTHO05D009881 1.7e-128 463.8 496 49.8
Lsat_1_v5_gn_7_37520 Lactuca sativa HOM05D007800 ORTHO05D009881 2.8e-128 463.0 496 49.4
COL.COLO4_18216 Corchorus olitorius HOM05D007800 ORTHO05D009881 4.8e-128 462.2 415 57.1
SGA_v2.0_scaffold23G09996 Striga asiatica HOM05D007800 ORTHO05D009881 7.2e-124 448.4 486 49.4
THA.LOC104801881 Tarenaya hassleriana HOM05D007800 ORTHO05D009881 9.4e-124 448.0 484 49.4
Thhalv10027131m.g Eutrema salsugineum HOM05D007800 ORTHO05D009881 1.2e-123 447.6 496 48.8
BolC3t21231H Brassica oleracea HOM05D007800 ORTHO05D009881 2.1e-123 446.8 498 49.4
SalBow1G2412 Salvia bowleyana HOM05D007800 ORTHO05D009881 3.6e-123 446.0 443 51.9
BcaB03g12612 Brassica carinata HOM05D007800 ORTHO05D009881 8.0e-123 444.9 496 50.2
C03p89220 Brassica napus HOM05D007800 ORTHO05D009881 1.0e-122 444.5 490 49.8
BcaC01g01177 Brassica carinata HOM05D007800 ORTHO05D009881 1.4e-122 444.1 498 49.6
A08p19590 Brassica napus HOM05D007800 ORTHO05D009881 3.9e-122 442.6 490 49.4
Peaxi162Scf00141g00327 Petunia axillaris HOM05D007800 ORTHO05D009881 5.2e-122 442.2 483 51.3
Carub.0007s1100 Capsella rubella HOM05D007800 ORTHO05D009881 1.1e-121 441.0 485 50.5
Thecc.09G091400 Theobroma cacao HOM05D007800 ORTHO05D009881 1.5e-121 440.7 418 55.7
AT4G29560 Arabidopsis thaliana HOM05D007800 ORTHO05D009881 3.3e-121 439.5 487 49.9
CARHR237380 Cardamine hirsuta HOM05D007800 ORTHO05D009881 5.7e-121 438.7 488 49.8
BraA08t33918Z Brassica rapa HOM05D007800 ORTHO05D009881 1.7e-120 437.2 493 48.9
PSO832G3388 Papaver somniferum HOM05D007800 ORTHO05D009881 1.8e-119 433.7 491 50.7
Atru.BG.11.p Acer truncatum HOM05D007800 ORTHO05D009881 3.1e-119 433.0 415 54.5
TWI32G0422 Tripterygium wilfordii HOM05D007800 ORTHO05D009881 7.0e-119 431.8 412 54.4
AL7G22820 Arabidopsis lyrata HOM05D007800 ORTHO05D009881 1.2e-118 431.0 487 48.7
MD15G1205200 Malus domestica HOM05D007800 ORTHO05D009881 1.2e-118 431.0 458 53.5
ECA240G1450 Erigeron canadensis HOM05D007800 ORTHO05D009881 4.4e-113 412.5 499 47.3
Sc08g0008380 Simmondsia chinensis HOM05D007800 ORTHO05D009881 4.1e-111 406.0 486 46.7
DCAR_010680 Daucus carota HOM05D007800 ORTHO05D009881 2.7e-110 403.3 410 52.9
MBI01_g01250_MAGBIO Magnolia biondii HOM05D007800 ORTHO05D009881 3.2e-108 396.4 497 44.3
Nn8g38899 Nelumbo nucifera HOM05D007800 ORTHO05D009881 2.3e-106 390.2 418 51.0
PSO063G3968 Papaver somniferum HOM05D007800 ORTHO05D009881 2.6e-97 360.1 417 49.9
Gohir.D06G070300 Gossypium hirsutum HOM05D007800 ORTHO05D009881 3.7e-96 356.3 360 55.0
HPP92_005239 Vanilla planifolia HOM05D007800 ORTHO05D009881 3.6e-91 339.7 491 42.6
FAN28G2802 Fragaria x ananassa HOM05D007800 ORTHO05D009881 5.2e-82 309.3 159 97.5
Lj7P673T61 Lonicera japonica HOM05D007800 ORTHO05D009881 1.5e-81 307.8 242 61.2
Zm00001eb385220 Zea mays HOM05D007800 ORTHO05D009881 4.9e-72 276.2 488 37.3
Os06g0573800 Oryza sativa ssp. japonica HOM05D007800 ORTHO05D009881 4.1e-71 273.1 485 35.5
ATR0782G161 Amborella trichopoda HOM05D007800 ORTHO05D009881 7.1e-71 272.3 534 34.6
SEGI_31551 Sequoiadendron giganteum HOM05D007800 ORTHO05D009881 4.6e-62 243.0 545 32.3
Dinv42307 Davidia involucrata HOM05D007800 ORTHO05D009881 3.8e-32 143.7 117 59.8
Mapoly0036s0155 Marchantia polymorpha HOM05D007800 ORTHO05D009881 9.3e-31 139.0 464 26.5
Pp3c4_16520 Physcomitrium patens HOM05D007800 ORTHO05D009881 5.1e-29 133.3 442 27.4
CDE05G3378 Ceratophyllum demersum HOM05D007800 ORTHO05D009881 8.8e-21 105.9 250 32.4
AagrBONN_evm.TU.Sc2ySwM_344.183 Anthoceros agrestis HOM05D007800 ORTHO05D009881 1.5e-12 78.6 176 33.0


User provided reference genes

Program Settings