Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN23G2273 Fragaria x ananassa HOM05D007038 ORTHO05D008893 8.4e-216 753.4 390 100.0
FAN23G1724 Fragaria x ananassa HOM05D007038 ORTHO05D008893 1.1e-212 743.0 395 98.2
FvH4_1g00730 Fragaria vesca HOM05D007038 ORTHO05D008893 6.7e-189 664.1 388 91.2
FAN28G0561 Fragaria x ananassa HOM05D007038 ORTHO05D008893 5.9e-185 651.0 409 86.3
RcHm_v2.0_Chr2g0085451 Rosa chinensis HOM05D007038 ORTHO05D008893 5.2e-181 637.9 391 86.4
MD15G1150700 Malus domestica HOM05D007038 ORTHO05D008893 1.0e-149 533.9 396 71.5
FAN26G1014 Fragaria x ananassa HOM05D007038 ORTHO05D008893 3.4e-148 528.9 390 75.4
Prupe.7G265000 Prunus persica HOM05D007038 ORTHO05D008893 9.8e-148 527.3 395 70.9
QL02p093776 Quercus lobata HOM05D007038 ORTHO05D008893 2.1e-134 483.0 392 66.1
Cfa020806 Carpinus fangiana HOM05D007038 ORTHO05D008893 7.1e-130 468.0 389 64.5
CiPaw.16G107900 Carya illinoinensis HOM05D007038 ORTHO05D008893 2.1e-126 456.4 392 64.0
Manes.06G033300 Manihot esculenta HOM05D007038 ORTHO05D008893 9.9e-124 447.6 384 62.0
GSVIVG01023636001 Vitis vinifera HOM05D007038 ORTHO05D008893 7.1e-122 441.4 382 59.9
Atru.chr7.996 Acer truncatum HOM05D007038 ORTHO05D008893 3.5e-121 439.1 384 62.2
TWI63G0746 Tripterygium wilfordii HOM05D007038 ORTHO05D008893 1.0e-120 437.6 384 60.4
Dinv42838 Davidia involucrata HOM05D007038 ORTHO05D008893 4.3e-119 432.2 392 58.9
Medtr4g130580 Medicago truncatula HOM05D007038 ORTHO05D008893 4.0e-117 425.6 397 57.2
CANSAT11G2324 Cannabis sativa HOM05D007038 ORTHO05D008893 2.2e-115 419.9 369 59.3
arahy.Tifrunner.gnm1.ann1.ULM9BE Arachis hypogaea HOM05D007038 ORTHO05D008893 1.4e-114 417.2 387 58.1
Gorai.013G241400 Gossypium raimondii HOM05D007038 ORTHO05D008893 1.4e-114 417.2 381 57.2
Dinv43261 Davidia involucrata HOM05D007038 ORTHO05D008893 1.9e-114 416.8 370 60.0
arahy.Tifrunner.gnm1.ann1.2821YK Arachis hypogaea HOM05D007038 ORTHO05D008893 2.4e-114 416.4 386 56.7
TPR.G24832 Trifolium pratense HOM05D007038 ORTHO05D008893 3.2e-114 416.0 390 57.2
CSS0015539 Camellia sinensis var. sinensis HOM05D007038 ORTHO05D008893 4.2e-114 415.6 395 58.5
Lj4g0021787 Lotus japonicus HOM05D007038 ORTHO05D008893 7.1e-114 414.8 391 57.8
VMungo1215G2991 Vigna mungo HOM05D007038 ORTHO05D008893 2.7e-113 412.9 388 57.2
Gohir.A13G206700 Gossypium hirsutum HOM05D007038 ORTHO05D008893 4.6e-113 412.1 381 56.7
Actinidia23561 Actinidia chinensis HOM05D007038 ORTHO05D008893 6.0e-113 411.8 402 57.7
Glyma.02G205400 Glycine max HOM05D007038 ORTHO05D008893 3.0e-112 409.5 388 55.9
TAR626G0465 Trochodendron aralioides HOM05D007038 ORTHO05D008893 3.0e-112 409.5 384 59.6
CSS0013222 Camellia sinensis var. sinensis HOM05D007038 ORTHO05D008893 3.3e-111 406.0 394 57.6
Lalb_Chr13g0300771 Lupinus albus HOM05D007038 ORTHO05D008893 6.2e-110 401.7 385 57.7
Sabra06G0139000 Salix brachista HOM05D007038 ORTHO05D008893 8.1e-110 401.4 482 48.5
Glyma.17G072600 Glycine max HOM05D007038 ORTHO05D008893 4.0e-109 399.1 389 56.0
Lj9A719G52 Lonicera japonica HOM05D007038 ORTHO05D008893 4.0e-109 399.1 389 60.2
Sed0007561 Sechium edule HOM05D007038 ORTHO05D008893 9.0e-109 397.9 390 55.1
PGR102G3121 Punica granatum HOM05D007038 ORTHO05D008893 4.2e-106 389.0 393 53.9
C02p13780 Brassica napus HOM05D007038 ORTHO05D008893 7.9e-105 384.8 386 52.6
BolC2t07497H Brassica oleracea HOM05D007038 ORTHO05D008893 7.9e-105 384.8 386 52.6
Psat0s3930g0120 Pisum sativum HOM05D007038 ORTHO05D008893 7.9e-105 384.8 367 56.7
ClCG02G014390 Citrullus lanatus HOM05D007038 ORTHO05D008893 6.7e-104 381.7 396 54.0
Thhalv10015603m.g Eutrema salsugineum HOM05D007038 ORTHO05D008893 9.6e-103 377.9 387 52.2
AL8G33930 Arabidopsis lyrata HOM05D007038 ORTHO05D008893 3.7e-102 375.9 394 53.0
Carub.0008s1841 Capsella rubella HOM05D007038 ORTHO05D008893 1.8e-101 373.6 396 52.0
CARHR271660 Cardamine hirsuta HOM05D007038 ORTHO05D008893 1.8e-101 373.6 402 51.7
Cpa.g.sc46.174 Carica papaya HOM05D007038 ORTHO05D008893 3.1e-101 372.9 391 53.7
Nn8g39966 Nelumbo nucifera HOM05D007038 ORTHO05D008893 2.0e-100 370.2 386 56.0
Eucgr.C02504 Eucalyptus grandis HOM05D007038 ORTHO05D008893 7.6e-100 368.2 388 54.1
Rhsim03G0258100 Rhododendron simsii HOM05D007038 ORTHO05D008893 1.7e-99 367.1 442 50.7
THA.LOC104811831 Tarenaya hassleriana HOM05D007038 ORTHO05D008893 2.2e-99 366.7 388 52.6
Haze_19163 Corylus avellana HOM05D007038 ORTHO05D008893 2.9e-99 366.3 424 51.2
Duzib150G1077 Durio zibethinus HOM05D007038 ORTHO05D008893 2.9e-99 366.3 381 54.6
ECA234G0501 Erigeron canadensis HOM05D007038 ORTHO05D008893 3.8e-99 365.9 390 54.1
AT5G57880 Arabidopsis thaliana HOM05D007038 ORTHO05D008893 1.1e-98 364.4 394 52.3
A10p15240 Brassica napus HOM05D007038 ORTHO05D008893 2.7e-97 359.8 419 48.7
Sopen07g001900 Solanum pennellii HOM05D007038 ORTHO05D008893 2.7e-97 359.8 416 48.8
BcaC04g19921 Brassica carinata HOM05D007038 ORTHO05D008893 3.9e-96 355.9 440 47.3
Sc14g0000940 Simmondsia chinensis HOM05D007038 ORTHO05D008893 3.9e-96 355.9 385 50.6
Aqoxy7G03364 Aquilegia oxysepala HOM05D007038 ORTHO05D008893 1.5e-95 354.0 372 53.5
Migut.J01371 Erythranthe guttata HOM05D007038 ORTHO05D008893 5.7e-95 352.1 359 55.2
Lsat_1_v5_gn_5_89520 Lactuca sativa HOM05D007038 ORTHO05D008893 9.6e-95 351.3 406 51.2
PGSC0003DMG400011195 Solanum tuberosum HOM05D007038 ORTHO05D008893 9.6e-95 351.3 435 46.9
BraA10t43606Z Brassica rapa HOM05D007038 ORTHO05D008893 1.5e-92 344.0 411 48.2
C09p49760 Brassica napus HOM05D007038 ORTHO05D008893 3.4e-92 342.8 402 48.3
A02p08130 Brassica napus HOM05D007038 ORTHO05D008893 5.9e-92 342.0 386 48.2
BraA02t05887Z Brassica rapa HOM05D007038 ORTHO05D008893 7.6e-92 341.7 385 48.3
Aa31LG3G13710 Aethionema arabicum HOM05D007038 ORTHO05D008893 1.0e-91 341.3 395 47.8
EL10Ac8g18937 Beta vulgaris HOM05D007038 ORTHO05D008893 3.8e-91 339.3 380 48.9
BcaB05g22382 Brassica carinata HOM05D007038 ORTHO05D008893 1.4e-90 337.4 408 48.5
Ciclev10009099m.g Citrus clementina HOM05D007038 ORTHO05D008893 1.4e-90 337.4 314 59.9
PSO063G4531 Papaver somniferum HOM05D007038 ORTHO05D008893 1.4e-90 337.4 389 49.4
Phvul.003G155000 Phaseolus vulgaris HOM05D007038 ORTHO05D008893 2.5e-90 336.7 328 55.2
HanXRQChr16g0520471 Helianthus annuus HOM05D007038 ORTHO05D008893 1.3e-88 330.9 458 46.1
SalBow1G2783 Salvia bowleyana HOM05D007038 ORTHO05D008893 1.9e-87 327.0 404 48.8
DCAR_019405 Daucus carota HOM05D007038 ORTHO05D008893 2.5e-87 326.6 342 50.6
Thecc.09G151200 Theobroma cacao HOM05D007038 ORTHO05D008893 1.1e-85 321.2 298 57.4
BolC9t57827H Brassica oleracea HOM05D007038 ORTHO05D008893 1.5e-84 317.4 454 42.7
Hund08926 Selenicereus undatus HOM05D007038 ORTHO05D008893 2.6e-84 316.6 414 46.6
SGA_v2.0_scaffold265G46092 Striga asiatica HOM05D007038 ORTHO05D008893 6.1e-81 305.4 305 55.1
Cc06_g14750 Coffea canephora HOM05D007038 ORTHO05D008893 1.4e-80 304.3 326 50.6
HanXRQChr16g0520451 Helianthus annuus HOM05D007038 ORTHO05D008893 1.8e-80 303.9 345 50.7
Ca_21139_v3 Cicer arietinum L. HOM05D007038 ORTHO05D008893 6.7e-80 302.0 330 52.4
Ca_21144_v3 Cicer arietinum L. HOM05D007038 ORTHO05D008893 6.7e-80 302.0 330 52.4
MBI14_g09472_MAGBIO Magnolia biondii HOM05D007038 ORTHO05D008893 1.1e-79 301.2 322 53.1
vmacro06062 Vaccinium macrocarpon HOM05D007038 ORTHO05D008893 2.4e-77 293.5 371 47.4
ATR0019G005 Amborella trichopoda HOM05D007038 ORTHO05D008893 5.9e-76 288.9 395 43.5
Nitab4.5_0002724g0040 Nicotiana tabacum HOM05D007038 ORTHO05D008893 5.5e-74 282.3 478 38.3
Os08g0555800 Oryza sativa ssp. japonica HOM05D007038 ORTHO05D008893 6.1e-73 278.9 387 43.7
Zm00001eb180360 Zea mays HOM05D007038 ORTHO05D008893 3.8e-67 259.6 387 41.6
Potri.006G182301 Populus trichocarpa HOM05D007038 ORTHO05D008893 3.3e-63 246.5 174 66.7
Gohir.D13G211300 Gossypium hirsutum HOM05D007038 ORTHO05D008893 6.3e-62 242.3 299 46.8
AUR62025344 Chenopodium quinoa HOM05D007038 ORTHO05D008893 2.2e-59 233.8 383 39.2
AUR62028347 Chenopodium quinoa HOM05D007038 ORTHO05D008893 3.8e-59 233.0 383 38.9
Solyc07g005790.4 Solanum lycopersicum HOM05D007038 ORTHO05D008893 5.9e-52 209.1 178 56.2
Nitab4.5_0002320g0050 Nicotiana tabacum HOM05D001418 ORTHO05D002038 2.2e-51 207.2 436 34.9
unitig_46.g18476 Utricularia gibba HOM05D007038 ORTHO05D008893 5.5e-50 202.6 253 47.0
CsaV3_2G007610 Cucumis sativus L. HOM05D007038 ORTHO05D008893 1.2e-49 201.4 278 46.0
CAN.G160.33 Capsicum annuum HOM05D007038 ORTHO05D008893 7.7e-44 182.2 161 54.7
Peaxi162Scf00401g00327 Petunia axillaris HOM05D007038 ORTHO05D008893 1.9e-42 177.6 144 61.8
Solyc07g005800.2 Solanum lycopersicum HOM05D007038 ORTHO05D008893 8.0e-33 145.6 187 47.6
Peaxi162Scf00401g00326 Petunia axillaris HOM05D007038 ORTHO05D008893 1.8e-32 144.4 198 45.5
Potri.006G182201 Populus trichocarpa HOM05D007038 ORTHO05D008893 3.1e-32 143.7 153 55.6
Hma1.2p1_0222F.1_g093710 Hydrangea macrophylla HOM05D007038 ORTHO05D008893 1.2e-23 115.2 91 65.9
Hma1.2p1_0222F.1_g093742 Hydrangea macrophylla HOM05D007038 ORTHO05D008893 1.2e-23 115.2 91 65.9
SHI02845 Sapria himalayana HOM05D007038 ORTHO05D008893 2.7e-20 104.0 159 44.7
PSO782G2459 Papaver somniferum HOM05D007038 ORTHO05D008893 3.0e-19 100.5 112 51.8
CDE02G0638 Ceratophyllum demersum HOM05D007038 ORTHO05D008893 8.1e-17 92.4 176 36.4
CDE05G1617 Ceratophyllum demersum HOM05D007038 ORTHO05D008893 8.9e-16 89.0 178 33.7
Pp3c7_6690 Physcomitrium patens HOM05D007038 ORTHO05D008893 7.6e-15 85.9 360 23.9
Ah.14g084570 Amaranthus hybridus HOM05D007038 ORTHO05D008893 1.6e-09 68.2 61 57.4


User provided reference genes

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