Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN23G2069 Fragaria x ananassa HOM05D005317 ORTHO05D005146 2.1e-97 359.0 178 100.0
FAN26G0581 Fragaria x ananassa HOM05D005317 ORTHO05D005146 1.3e-94 349.7 178 97.8
FAN28G2997 Fragaria x ananassa HOM05D005317 ORTHO05D005146 1.3e-94 349.7 178 97.2
FvH4_1g18210 Fragaria vesca HOM05D005317 ORTHO05D005146 3.4e-87 325.1 179 92.2
FAN19G1325 Fragaria x ananassa HOM05D005317 ORTHO05D005146 7.5e-87 323.9 179 91.6
RcHm_v2.0_Chr2g0108721 Rosa chinensis HOM05D005317 ORTHO05D005146 2.3e-83 312.4 178 87.1
Prupe.6G217200 Prunus persica HOM05D005317 ORTHO05D005146 1.9e-37 159.8 178 52.8
QL06p038960 Quercus lobata HOM05D005317 ORTHO05D005146 2.2e-25 119.8 178 41.6
Ciclev10026641m.g Citrus clementina HOM05D005317 ORTHO05D005146 6.3e-25 118.2 183 38.3
Manes.13G109200 Manihot esculenta HOM05D005317 ORTHO05D005146 1.8e-24 116.7 183 41.5
Atru.chr3.1057 Acer truncatum HOM05D005317 ORTHO05D005146 2.4e-24 116.3 188 42.0
CSS0048752 Camellia sinensis var. sinensis HOM05D005317 ORTHO05D005146 2.4e-24 116.3 179 43.0
Lj4g0026806 Lotus japonicus HOM05D005317 ORTHO05D005146 2.4e-24 116.3 178 42.1
Potri.007G007000 Populus trichocarpa HOM05D005317 ORTHO05D005146 2.0e-23 113.2 182 40.7
Phvul.003G233000 Phaseolus vulgaris HOM05D005317 ORTHO05D005146 1.7e-22 110.2 173 38.7
Thecc.01G076000 Theobroma cacao HOM05D005317 ORTHO05D005146 1.7e-22 110.2 182 42.3
Hma1.2p1_1139F.1_g260880 Hydrangea macrophylla HOM05D005317 ORTHO05D005146 3.8e-22 109.0 177 43.5
TAR381G0867 Trochodendron aralioides HOM05D005317 ORTHO05D005146 5.0e-22 108.6 168 40.5
Medtr4g097480 Medicago truncatula HOM05D005317 ORTHO05D005146 1.4e-21 107.1 172 38.4
Haze_15027 Corylus avellana HOM05D005317 ORTHO05D005146 4.2e-21 105.5 172 41.3
COL.COLO4_11612 Corchorus olitorius HOM05D005317 ORTHO05D005146 5.5e-21 105.1 180 39.4
VMungo0251G0145 Vigna mungo HOM05D005317 ORTHO05D005146 5.5e-21 105.1 176 38.1
Glyma.05G108400 Glycine max HOM05D005317 ORTHO05D005146 9.4e-21 104.4 179 40.8
Sabra07G0005300 Salix brachista HOM05D005317 ORTHO05D005146 1.6e-20 103.6 182 35.7
Cfa004386 Carpinus fangiana HOM05D005317 ORTHO05D005146 6.1e-20 101.7 171 35.7
Psat0ss26165g0240 Pisum sativum HOM05D005317 ORTHO05D005146 6.1e-20 101.7 173 37.6
CiPaw.01G002200 Carya illinoinensis HOM05D005317 ORTHO05D005146 1.4e-19 100.5 179 43.6
TAR376G0587 Trochodendron aralioides HOM05D005317 ORTHO05D005146 1.4e-19 100.5 172 41.9
COL.COLO4_28461 Corchorus olitorius HOM05D005317 ORTHO05D005146 5.1e-19 98.6 176 38.6
Manes.05G183500 Manihot esculenta HOM05D005317 ORTHO05D005146 5.1e-19 98.6 168 40.5
Gohir.D12G076800 Gossypium hirsutum HOM05D005317 ORTHO05D005146 1.1e-18 97.4 182 37.9
Gorai.008G085600 Gossypium raimondii HOM05D005317 ORTHO05D005146 1.1e-18 97.4 182 37.9
Oeu047228.1 Olea europaea HOM05D005317 ORTHO05D005146 1.1e-18 97.4 174 39.7
TAR628G1097 Trochodendron aralioides HOM05D005317 ORTHO05D005146 3.3e-18 95.9 170 40.6
Duzib187G1956 Durio zibethinus HOM05D005317 ORTHO05D005146 4.4e-18 95.5 187 38.5
TPR.G3735 Trifolium pratense HOM05D005317 ORTHO05D005146 1.3e-17 94.0 174 35.6
Glyma.17G158600 Glycine max HOM05D005317 ORTHO05D005146 1.7e-17 93.6 179 38.5
Lalb_Chr09g0335521 Lupinus albus HOM05D005317 ORTHO05D005146 1.7e-17 93.6 187 36.4
MSTRG.23654 Avicennia marina HOM05D005317 ORTHO05D005146 2.2e-17 93.2 180 36.1
Gohir.A12G080100 Gossypium hirsutum HOM05D005317 ORTHO05D005146 4.8e-17 92.0 184 38.6
Sabra14G0007800 Salix brachista HOM05D005317 ORTHO05D005146 6.3e-17 91.7 176 35.8
Potri.014G013000 Populus trichocarpa HOM05D005317 ORTHO05D005146 8.2e-17 91.3 178 34.3
Actinidia16411 Actinidia chinensis HOM05D005317 ORTHO05D005146 1.1e-16 90.9 167 35.9
SalBow4G3082 Salvia bowleyana HOM05D005317 ORTHO05D005146 1.1e-16 90.9 174 35.6
Thecc.08G084700 Theobroma cacao HOM05D005317 ORTHO05D005146 2.4e-16 89.7 174 35.6
Gohir.D03G030600 Gossypium hirsutum HOM05D005317 ORTHO05D005146 4.1e-16 89.0 178 36.0
Gohir.A02G149800 Gossypium hirsutum HOM05D005317 ORTHO05D005146 5.3e-16 88.6 172 35.5
SalBow3G0220 Salvia bowleyana HOM05D005317 ORTHO05D005146 6.9e-16 88.2 177 33.9
Aqoxy6G02455 Aquilegia oxysepala HOM05D005317 ORTHO05D005146 1.5e-15 87.0 177 36.2
Oeu053645.1 Olea europaea HOM05D005317 ORTHO05D005146 1.5e-15 87.0 172 35.5
Eucgr.H02331 Eucalyptus grandis HOM05D005317 ORTHO05D005146 2.0e-15 86.7 182 36.8
Glyma.06G048700 Glycine max HOM05D005317 ORTHO05D005146 2.6e-15 86.3 173 32.9
Oeu021452.1 Olea europaea HOM05D005317 ORTHO05D005146 3.4e-15 85.9 187 35.3
Gorai.003G032200 Gossypium raimondii HOM05D005317 ORTHO05D005146 5.9e-15 85.1 173 34.1
Phvul.001G030800 Phaseolus vulgaris HOM05D005317 ORTHO05D005146 5.9e-15 85.1 173 35.3
Lalb_Chr24g0399511 Lupinus albus HOM05D005317 ORTHO05D005146 7.7e-15 84.7 159 35.2
Eucgr.F00095 Eucalyptus grandis HOM05D005317 ORTHO05D005146 1.3e-14 84.0 170 32.9
GSVIVG01009301001 Vitis vinifera HOM05D005317 ORTHO05D005146 1.3e-14 84.0 166 36.1
SGA_v2.0_scaffold15G07499 Striga asiatica HOM05D005317 ORTHO05D005146 2.2e-14 83.2 177 32.8
CiPaw.08G052300 Carya illinoinensis HOM05D005317 ORTHO05D005146 2.9e-14 82.8 173 36.4
Migut.C00473 Erythranthe guttata HOM05D005317 ORTHO05D005146 2.9e-14 82.8 171 37.4
Haze_22391 Corylus avellana HOM05D005317 ORTHO05D005146 3.8e-14 82.4 204 31.9
VMungo0647G1960 Vigna mungo HOM05D005317 ORTHO05D005146 3.8e-14 82.4 173 32.9
ClCG01G017790 Citrullus lanatus HOM05D005317 ORTHO05D005146 1.1e-13 80.9 181 35.9
Oeu014288.1 Olea europaea HOM05D005317 ORTHO05D005146 1.1e-13 80.9 163 35.0
Sed0021979 Sechium edule HOM05D005317 ORTHO05D005146 1.1e-13 80.9 170 37.1
Glyma.14G089084 Glycine max HOM05D005317 ORTHO05D005146 1.4e-13 80.5 166 34.3
Gohir.A06G025600 Gossypium hirsutum HOM05D005317 ORTHO05D005146 1.4e-13 80.5 171 34.5
Rhsim07G0217500 Rhododendron simsii HOM05D005317 ORTHO05D005146 1.9e-13 80.1 174 31.6
Gorai.010G027300 Gossypium raimondii HOM05D005317 ORTHO05D005146 3.2e-13 79.3 171 32.7
Medtr1g017500 Medicago truncatula HOM05D005317 ORTHO05D005146 3.2e-13 79.3 166 33.1
Sopen04g031150 Solanum pennellii HOM05D005317 ORTHO05D005146 3.2e-13 79.3 157 38.2
Actinidia29632 Actinidia chinensis HOM05D005317 ORTHO05D005146 4.2e-13 79.0 112 42.0
Nn5g30662 Nelumbo nucifera HOM05D005317 ORTHO05D005146 5.5e-13 78.6 167 34.7
Cc10_g07630 Coffea canephora HOM05D005317 ORTHO05D005146 1.6e-12 77.0 178 34.3
Lj4C75G10 Lonicera japonica HOM05D002048 ORTHO05D002146 2.1e-12 76.6 114 41.2
Gohir.A11G212400 Gossypium hirsutum HOM05D005317 ORTHO05D005146 2.7e-12 76.3 177 35.0
Gohir.D06G022700 Gossypium hirsutum HOM05D005317 ORTHO05D005146 4.7e-12 75.5 171 33.3
VMungo1309G2313 Vigna mungo HOM05D005317 ORTHO05D005146 6.1e-12 75.1 169 29.6
Glyma.17G232900 Glycine max HOM05D005317 ORTHO05D005146 8.0e-12 74.7 167 34.7
Dinv23042 Davidia involucrata HOM05D005317 ORTHO05D005146 1.8e-11 73.6 163 35.0
DCAR_020064 Daucus carota HOM05D005317 ORTHO05D005146 2.3e-11 73.2 175 32.0
Gohir.D05G215300 Gossypium hirsutum HOM05D005317 ORTHO05D005146 2.3e-11 73.2 177 32.8
Prupe.1G419300 Prunus persica HOM05D005317 ORTHO05D005146 2.3e-11 73.2 170 32.9
DCAR_009867 Daucus carota HOM05D005317 ORTHO05D005146 5.2e-11 72.0 183 31.1
TPR.G13020 Trifolium pratense HOM05D005317 ORTHO05D005146 5.2e-11 72.0 165 31.5
Cfa013739 Carpinus fangiana HOM05D005317 ORTHO05D005146 6.7e-11 71.6 175 34.9
Lj5g0002019 Lotus japonicus HOM05D005317 ORTHO05D005146 6.7e-11 71.6 161 33.5
Gorai.007G226200 Gossypium raimondii HOM05D005317 ORTHO05D005146 2.0e-10 70.1 172 37.2
Actinidia10221 Actinidia chinensis HOM05D005317 ORTHO05D005146 2.6e-10 69.7 112 37.5
Sc24g0002340 Simmondsia chinensis HOM05D005317 ORTHO05D005146 3.3e-10 69.3 161 31.1
Migut.H00325 Erythranthe guttata HOM05D005317 ORTHO05D005146 4.4e-10 68.9 181 32.0
CiPaw.07G172100 Carya illinoinensis HOM05D005317 ORTHO05D005146 5.7e-10 68.6 178 29.8
Atru.chr13.870 Acer truncatum HOM05D005317 ORTHO05D005146 1.3e-09 67.4 176 34.7
Ciclev10029376m.g Citrus clementina HOM05D005317 ORTHO05D005146 1.3e-09 67.4 190 28.4
Dinv26957 Davidia involucrata HOM05D005317 ORTHO05D005146 1.3e-09 67.4 126 38.1
ATR0739G163 Amborella trichopoda HOM05D005317 ORTHO05D005146 2.2e-09 66.6 181 33.1
Manes.05G183600 Manihot esculenta HOM05D005317 ORTHO05D005146 2.2e-09 66.6 174 31.0
Cpa.g.c31093.6 Carica papaya HOM05D005317 ORTHO05D005146 3.7e-09 65.9 172 30.8
Gohir.A05G212000 Gossypium hirsutum HOM05D005317 ORTHO05D005146 3.1e-08 62.8 177 31.1
Gorai.009G222000 Gossypium raimondii HOM05D005317 ORTHO05D005146 3.1e-08 62.8 169 32.0
CiPaw.07G172000 Carya illinoinensis HOM05D005317 ORTHO05D005146 4.1e-08 62.4 162 33.3
FAN20G0770 Fragaria x ananassa HOM05D030376 ORTHO05D005146 5.3e-08 62.0 177 29.4
Rhsim08G0090500 Rhododendron simsii HOM05D005317 ORTHO05D005146 7.0e-08 61.6 171 29.8
PGSC0003DMG400004968 Solanum tuberosum HOM05D005317 ORTHO05D005146 7.0e-08 61.6 153 32.7
COL.COLO4_28460 Corchorus olitorius HOM05D005317 ORTHO05D005146 9.1e-08 61.2 180 28.9
FAN27G2237 Fragaria x ananassa HOM05D030376 ORTHO05D005146 1.6e-07 60.5 179 31.8
MBI16_g41241_MAGBIO Magnolia biondii HOM05D005317 ORTHO05D005146 2.0e-07 60.1 169 32.0
Actinidia11964 Actinidia chinensis HOM05D031334 ORTHO05D026410 2.6e-07 59.7 114 36.8
FAN15G0380 Fragaria x ananassa HOM05D030376 ORTHO05D005146 3.5e-07 59.3 184 29.9
Gohir.A01G123600 Gossypium hirsutum HOM05D005317 ORTHO05D005146 5.9e-07 58.5 179 26.3
Aqoxy6G02509 Aquilegia oxysepala HOM05D005317 ORTHO05D005146 7.7e-07 58.2 109 35.8
MSTRG.25022 Avicennia marina HOM05D005317 ORTHO05D005146 7.7e-07 58.2 175 28.6
CsaV3_6G044310 Cucumis sativus L. HOM05D005317 ORTHO05D005146 1.0e-06 57.8 181 32.0
Gorai.002G136200 Gossypium raimondii HOM05D005317 ORTHO05D005146 1.3e-06 57.4 170 27.6
Gohir.D01G111432 Gossypium hirsutum HOM05D005317 ORTHO05D005146 1.7e-06 57.0 179 26.3
Thecc.08G084600 Theobroma cacao HOM05D005317 ORTHO05D005146 2.2e-06 56.6 176 29.0
FvH4_1g18200 Fragaria vesca HOM05D041506 ORTHO05D046052 3.8e-06 55.8 115 35.7
EL10Ac6g13373 Beta vulgaris HOM05D005317 ORTHO05D005146 5.0e-06 55.5 124 33.1
Ciclev10027255m.g Citrus clementina HOM05D005317 ORTHO05D005146 8.5e-06 54.7 177 27.7
Prupe.1G419200 Prunus persica HOM05D005317 ORTHO05D005146 8.5e-06 54.7 189 27.5


User provided reference genes

Program Settings