Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN23G2038 Fragaria x ananassa HOM05D005630 ORTHO05D006979 1.2e-104 383.3 211 100.0
FAN28G1107 Fragaria x ananassa HOM05D005630 ORTHO05D006979 1.9e-65 253.1 211 71.6
FvH4_1g01540 Fragaria vesca HOM05D005630 ORTHO05D006979 1.8e-63 246.5 213 71.4
FAN26G1041 Fragaria x ananassa HOM05D005630 ORTHO05D006979 9.0e-63 244.2 211 71.6
FAN19G2317 Fragaria x ananassa HOM05D005630 ORTHO05D006979 1.7e-53 213.4 211 63.5
RcHm_v2.0_Chr2g0086501 Rosa chinensis HOM05D005630 ORTHO05D006979 8.4e-53 211.1 180 62.2
Prupe.7G253200 Prunus persica HOM05D005630 ORTHO05D006979 8.2e-48 194.5 173 58.4
MD15G1158000 Malus domestica HOM05D005630 ORTHO05D006979 1.8e-47 193.4 180 56.7
TWI34G2008 Tripterygium wilfordii HOM05D005630 ORTHO05D006979 2.4e-47 193.0 173 57.8
Cfa020874 Carpinus fangiana HOM05D005630 ORTHO05D006979 5.3e-47 191.8 173 59.5
Prupe.3G048400 Prunus persica HOM05D005630 ORTHO05D006979 5.3e-47 191.8 173 57.2
Haze_19305 Corylus avellana HOM05D005630 ORTHO05D006979 2.0e-46 189.9 173 59.0
QL02p091555 Quercus lobata HOM05D005630 ORTHO05D006979 3.4e-46 189.1 173 56.6
ClCG10G005100 Citrullus lanatus HOM05D005630 ORTHO05D006979 4.5e-46 188.7 173 57.8
MD02G1012200 Malus domestica HOM05D005630 ORTHO05D006979 4.5e-46 188.7 174 56.9
CANSAT11G0524 Cannabis sativa HOM05D005630 ORTHO05D006979 1.3e-45 187.2 180 53.3
TAR383G0582 Trochodendron aralioides HOM05D005630 ORTHO05D006979 3.8e-45 185.7 173 55.5
Sed0022514 Sechium edule HOM05D005630 ORTHO05D006979 5.0e-45 185.3 173 56.1
Sc08g0004950 Simmondsia chinensis HOM05D005630 ORTHO05D006979 5.0e-45 185.3 180 53.9
CiPaw.04G061600 Carya illinoinensis HOM05D005630 ORTHO05D006979 8.4e-45 184.5 173 54.3
Oeu028785.1 Olea europaea HOM05D005630 ORTHO05D006979 2.5e-44 183.0 167 56.3
PGR142G4039 Punica granatum HOM05D005630 ORTHO05D006979 7.1e-44 181.4 173 54.3
Eucgr.H01921 Eucalyptus grandis HOM05D005630 ORTHO05D006979 6.1e-43 178.3 173 52.0
Nn8g40117 Nelumbo nucifera HOM05D005630 ORTHO05D006979 7.9e-43 177.9 172 54.7
Atru.chr7.200 Acer truncatum HOM05D005630 ORTHO05D006979 1.0e-42 177.6 180 53.3
Eucgr.H01228 Eucalyptus grandis HOM05D005630 ORTHO05D006979 1.3e-42 177.2 173 51.4
CSS0013521 Camellia sinensis var. sinensis HOM05D005630 ORTHO05D006979 1.8e-42 176.8 167 55.1
Oeu040774.1 Olea europaea HOM05D005630 ORTHO05D006979 1.8e-42 176.8 168 56.0
Rhsim03G0057400 Rhododendron simsii HOM05D005630 ORTHO05D006979 3.9e-42 175.6 166 55.4
Duzib128G0941 Durio zibethinus HOM05D005630 ORTHO05D006979 5.1e-42 175.3 179 52.0
Potri.018G113200 Populus trichocarpa HOM05D005630 ORTHO05D006979 5.1e-42 175.3 181 53.0
MELO3C014176.2 Cucumis melo HOM05D005630 ORTHO05D006979 6.7e-42 174.9 171 55.6
Hma1.2p1_1164F.1_g262820 Hydrangea macrophylla HOM05D005630 ORTHO05D006979 6.7e-42 174.9 167 55.7
Nitab4.5_0000914g0010 Nicotiana tabacum HOM05D005630 ORTHO05D006979 2.5e-41 172.9 167 53.9
CsaV3_3G004770 Cucumis sativus L. HOM05D005630 ORTHO05D006979 5.7e-41 171.8 165 56.4
GSVIVG01001041001 Vitis vinifera HOM05D005630 ORTHO05D006979 5.7e-41 171.8 173 53.2
Gohir.A05G280400 Gossypium hirsutum HOM05D005630 ORTHO05D006979 9.7e-41 171.0 173 52.0
Manes.03G015700 Manihot esculenta HOM05D005630 ORTHO05D006979 1.6e-40 170.2 165 53.9
Gohir.D05G282200 Gossypium hirsutum HOM05D005630 ORTHO05D006979 2.2e-40 169.9 173 51.4
Gorai.009G295600 Gossypium raimondii HOM05D005630 ORTHO05D006979 2.2e-40 169.9 173 51.4
Peaxi162Scf00083g01117 Petunia axillaris HOM05D005630 ORTHO05D006979 2.2e-40 169.9 167 53.3
COL.COLO4_35448 Corchorus olitorius HOM05D000321 ORTHO05D000204 3.7e-40 169.1 165 53.3
Lj2g0025219 Lotus japonicus HOM05D005630 ORTHO05D006979 3.7e-40 169.1 173 50.9
EL10Ac4g09637 Beta vulgaris HOM05D005630 ORTHO05D006979 4.8e-40 168.7 173 49.7
CAN.G1505.19 Capsicum annuum HOM05D005630 ORTHO05D006979 6.3e-40 168.3 173 50.9
Nitab4.5_0005975g0020 Nicotiana tabacum HOM05D005630 ORTHO05D006979 6.3e-40 168.3 168 51.8
Nitab4.5_0002880g0080 Nicotiana tabacum HOM05D005630 ORTHO05D006979 1.4e-39 167.2 166 51.2
Nitab4.5_0003965g0050 Nicotiana tabacum HOM05D005630 ORTHO05D006979 3.1e-39 166.0 167 51.5
Actinidia03956 Actinidia chinensis HOM05D005630 ORTHO05D006979 9.0e-39 164.5 179 49.2
Lsat_1_v5_gn_5_90640 Lactuca sativa HOM05D005630 ORTHO05D006979 9.0e-39 164.5 174 51.7
Solyc05g054990.3 Solanum lycopersicum HOM05D005630 ORTHO05D006979 1.5e-38 163.7 169 50.9
Sopen05g033450 Solanum pennellii HOM05D005630 ORTHO05D006979 1.5e-38 163.7 169 50.9
PGSC0003DMG400023408 Solanum tuberosum HOM05D005630 ORTHO05D006979 1.5e-38 163.7 168 51.8
Ciclev10009802m.g Citrus clementina HOM05D005630 ORTHO05D006979 2.0e-38 163.3 204 46.6
MSTRG.19630 Avicennia marina HOM05D005630 ORTHO05D006979 2.6e-38 162.9 179 49.7
HanXRQChr10g0314501 Helianthus annuus HOM05D005630 ORTHO05D006979 2.6e-38 162.9 180 47.2
CAN.G1465.11 Capsicum annuum HOM05D005630 ORTHO05D006979 4.5e-38 162.2 167 50.9
Cc06_g16720 Coffea canephora HOM05D005630 ORTHO05D006979 1.0e-37 161.0 173 51.4
Sopen02g029090 Solanum pennellii HOM05D005630 ORTHO05D006979 1.3e-37 160.6 174 49.4
Lj3g0020108 Lotus japonicus HOM05D005630 ORTHO05D006979 2.2e-37 159.8 170 50.6
Thhalv10021733m.g Eutrema salsugineum HOM05D005630 ORTHO05D006979 5.0e-37 158.7 181 49.2
Solyc02g084380.3 Solanum lycopersicum HOM05D005630 ORTHO05D006979 5.0e-37 158.7 174 48.9
BcaB06g25926 Brassica carinata HOM05D005630 ORTHO05D006979 1.1e-36 157.5 181 48.6
Ca_08945_v3 Cicer arietinum L. HOM05D005630 ORTHO05D006979 1.1e-36 157.5 168 50.0
ECA234G3390 Erigeron canadensis HOM05D000399 ORTHO05D000304 1.9e-36 156.8 175 50.3
BcaC05g28577 Brassica carinata HOM05D005630 ORTHO05D006979 2.5e-36 156.4 181 47.5
A05p30870 Brassica napus HOM05D005630 ORTHO05D006979 2.5e-36 156.4 181 47.5
C05p46800 Brassica napus HOM05D005630 ORTHO05D006979 2.5e-36 156.4 181 47.5
BolC5t33410H Brassica oleracea HOM05D005630 ORTHO05D006979 2.5e-36 156.4 181 47.5
DCAR_019353 Daucus carota HOM05D000452 ORTHO05D000647 2.5e-36 156.4 160 50.6
Psat3g037680 Pisum sativum HOM05D005630 ORTHO05D006979 3.2e-36 156.0 168 48.8
TPR.G21379 Trifolium pratense HOM05D005630 ORTHO05D006979 3.2e-36 156.0 166 50.6
Aa31LG8G5570 Aethionema arabicum HOM05D005630 ORTHO05D006979 4.2e-36 155.6 180 47.2
BraA05t21929Z Brassica rapa HOM05D005630 ORTHO05D006979 4.2e-36 155.6 181 47.5
THA.LOC104815401 Tarenaya hassleriana HOM05D005630 ORTHO05D006979 5.5e-36 155.2 173 49.1
TPR.G31501 Trifolium pratense HOM05D005630 ORTHO05D006979 7.2e-36 154.8 169 49.1
Migut.J01281 Erythranthe guttata HOM05D005630 ORTHO05D006979 9.4e-36 154.5 173 49.1
THA.LOC104826572 Tarenaya hassleriana HOM05D005630 ORTHO05D006979 9.4e-36 154.5 181 48.1
Sp3g16800 Schrenkiella parvula HOM05D005630 ORTHO05D006979 1.6e-35 153.7 180 46.7
vmacro07529 Vaccinium macrocarpon HOM05D005630 ORTHO05D006979 2.1e-35 153.3 146 56.2
AL3G32110 Arabidopsis lyrata HOM05D005630 ORTHO05D006979 2.7e-35 152.9 180 47.2
BcaB04g19003 Brassica carinata HOM05D005630 ORTHO05D006979 2.7e-35 152.9 181 46.4
Carub.0003s1855 Capsella rubella HOM05D005630 ORTHO05D006979 2.7e-35 152.9 180 47.2
Glyma.01G008800 Glycine max HOM05D005630 ORTHO05D006979 3.6e-35 152.5 168 50.0
Medtr7g103190 Medicago truncatula HOM05D005630 ORTHO05D006979 3.6e-35 152.5 156 50.6
Actinidia37787 Actinidia chinensis HOM05D005630 ORTHO05D006979 4.6e-35 152.1 168 47.6
Glyma.16G077600 Glycine max HOM05D005630 ORTHO05D006979 6.1e-35 151.8 168 49.4
Os01g0220300 Oryza sativa ssp. japonica HOM05D005630 ORTHO05D006979 6.1e-35 151.8 179 44.7
SalBow1G1736 Salvia bowleyana HOM05D005630 ORTHO05D006979 6.1e-35 151.8 166 48.8
AT3G18760 Arabidopsis thaliana HOM05D005630 ORTHO05D006979 7.9e-35 151.4 180 47.2
Lalb_Chr01g0020901 Lupinus albus HOM05D005630 ORTHO05D006979 1.0e-34 151.0 168 49.4
CARHR094150 Cardamine hirsuta HOM05D005630 ORTHO05D006979 1.8e-34 150.2 180 47.2
Phvul.004G170400 Phaseolus vulgaris HOM05D005630 ORTHO05D006979 1.8e-34 150.2 173 48.6
C03p49710 Brassica napus HOM05D005630 ORTHO05D006979 2.3e-34 149.8 162 50.0
unitig_46.g18374 Utricularia gibba HOM05D005736 ORTHO05D007215 2.3e-34 149.8 170 45.9
SGA_v2.0_scaffold336G49163 Striga asiatica HOM05D005630 ORTHO05D006979 3.0e-34 149.4 173 46.2
VMungo0464G1149 Vigna mungo HOM05D005630 ORTHO05D006979 3.0e-34 149.4 170 47.1
PSO210G0346 Papaver somniferum HOM05D005630 ORTHO05D006979 3.9e-34 149.1 152 52.6
PSO210G6044 Papaver somniferum HOM05D005630 ORTHO05D006979 3.9e-34 149.1 152 52.6
arahy.Tifrunner.gnm1.ann1.N9H741 Arachis hypogaea HOM05D005630 ORTHO05D006979 5.1e-34 148.7 156 51.3
Medtr6g088605 Medicago truncatula HOM05D005630 ORTHO05D006979 5.1e-34 148.7 166 47.6
unitig_46.g18303 Utricularia gibba HOM05D005630 ORTHO05D006979 6.7e-34 148.3 170 45.9
BolC3t17269H Brassica oleracea HOM05D005630 ORTHO05D006979 1.1e-33 147.5 182 45.1
BraA03t13240Z Brassica rapa HOM05D005630 ORTHO05D006979 1.1e-33 147.5 182 44.5
VMungo0464G1592 Vigna mungo HOM05D005630 ORTHO05D006979 5.7e-33 145.2 173 46.2
Psat5g026240 Pisum sativum HOM05D005630 ORTHO05D006979 7.4e-33 144.8 147 51.7
Thecc.10G171800 Theobroma cacao HOM05D005630 ORTHO05D006979 1.4e-31 140.6 154 50.0
A03p40820 Brassica napus HOM05D005630 ORTHO05D006979 5.3e-31 138.7 182 42.9
Dinv41416 Davidia involucrata HOM05D005630 ORTHO05D006979 9.1e-31 137.9 148 50.7
HPP92_008634 Vanilla planifolia HOM05D005630 ORTHO05D006979 2.6e-30 136.3 170 45.3
Zm00001eb119770 Zea mays HOM05D005630 ORTHO05D006979 2.6e-30 136.3 183 43.2
Ah.01g003710 Amaranthus hybridus HOM05D005630 ORTHO05D006979 5.0e-29 132.1 167 46.7
MBI07_g35858_MAGBIO Magnolia biondii HOM05D005630 ORTHO05D006979 1.9e-28 130.2 135 51.9
CDE02G3819 Ceratophyllum demersum HOM05D005630 ORTHO05D006979 6.1e-27 125.2 132 50.8
unitig_48.g30288 Utricularia gibba HOM05D005630 ORTHO05D006979 3.3e-25 119.4 148 43.2
Lj7A451T27 Lonicera japonica HOM05D005630 ORTHO05D006979 1.0e-21 107.8 64 75.0
SGA_v2.0_scaffold416G51224 Striga asiatica HOM05D005630 ORTHO05D006979 6.5e-21 105.1 61 73.8
Eucgr.B02192 Eucalyptus grandis HOM05D005630 ORTHO05D006979 2.5e-20 103.2 126 44.4
Eucgr.L01073 Eucalyptus grandis HOM05D005630 ORTHO05D006979 9.4e-20 101.3 65 69.2
AagrBONN_evm.TU.Sc2ySwM_117.2919 Anthoceros agrestis HOM05D005630 ORTHO05D006979 1.6e-19 100.5 149 36.9
ATR1096G006 Amborella trichopoda HOM05D005630 ORTHO05D006979 8.0e-19 98.2 65 69.2
Cpa.g.sc20.36 Carica papaya HOM05D005630 ORTHO05D006979 8.0e-19 98.2 65 67.7
AUR62001080 Chenopodium quinoa HOM05D005630 ORTHO05D006979 1.0e-18 97.8 63 68.3
Pp3c3_21570 Physcomitrium patens HOM05D005630 ORTHO05D006979 4.0e-18 95.9 149 34.2
MBI07_g26347_MAGBIO Magnolia biondii HOM05D005630 ORTHO05D006979 7.5e-17 91.7 65 64.6
AUR62004880 Chenopodium quinoa HOM05D005630 ORTHO05D006979 1.3e-16 90.9 63 63.5
Mapoly0179s0002 Marchantia polymorpha HOM05D005630 ORTHO05D006979 3.7e-16 89.4 149 35.6
SMO146G0230 Selaginella moellendorffii HOM05D005630 ORTHO05D006979 1.1e-15 87.8 149 32.9
Nn2g11495 Nelumbo nucifera HOM05D005630 ORTHO05D006979 2.4e-15 86.7 60 61.7
SEGI_16423 Sequoiadendron giganteum HOM05D005630 ORTHO05D006979 4.1e-15 85.9 61 60.7
CBR_g37184 Chara braunii HOM05D005630 ORTHO05D006979 2.0e-14 83.6 149 35.6
MD16G1239100 Malus domestica HOM05D005630 ORTHO05D006979 3.5e-14 82.8 57 66.7
TPR.G10852 Trifolium pratense HOM05D005630 ORTHO05D006979 5.5e-12 75.5 49 69.4
AUR62039003 Chenopodium quinoa HOM05D005630 ORTHO05D006979 4.7e-11 72.4 54 59.3
FvH4_2g05981 Fragaria vesca HOM05D026122 ORTHO05D197301 1.5e-09 67.4 40 85.0
SalBow1G6627 Salvia bowleyana HOM05D005630 ORTHO05D006979 4.4e-09 65.9 52 57.7
Medtr5g037160 Medicago truncatula HOM05D005630 ORTHO05D000782 1.3e-08 64.3 36 80.6


User provided reference genes

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