Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN23G1952 Fragaria x ananassa HOM05D013851 ORTHO05D200189 1.2e-158 563.1 299 100.0
FAN26G0587 Fragaria x ananassa HOM05D013851 ORTHO05D209885 1.6e-158 562.8 298 100.0
FAN19G0222 Fragaria x ananassa HOM05D013851 ORTHO05D035529 1.4e-141 506.5 296 86.8
FvH4_1g10090 Fragaria vesca HOM05D013851 ORTHO05D035529 4.0e-141 505.0 296 86.8
FAN23G1695 Fragaria x ananassa HOM05D013851 ORTHO05D035529 1.5e-124 449.9 249 90.8
FAN28G0755 Fragaria x ananassa HOM05D013851 ORTHO05D206134 1.7e-123 446.4 248 95.6
FAN20G3188 Fragaria x ananassa HOM05D013851 ORTHO05D209636 3.7e-102 375.6 208 91.3
FAN27G1624 Fragaria x ananassa HOM05D013851 ORTHO05D201469 1.4e-101 373.6 208 90.9
FAN12G4035 Fragaria x ananassa HOM05D013851 ORTHO05D207509 7.9e-97 357.8 263 72.2
FAN09G1426 Fragaria x ananassa HOM05D013851 ORTHO05D200850 2.5e-74 283.1 145 97.9
FAN28G0356 Fragaria x ananassa HOM05D013851 ORTHO05D198967 2.5e-74 283.1 145 97.9
Atru.chr1.1561 Acer truncatum HOM05D000095 ORTHO05D000393 9.0e-08 62.0 82 36.6
Zm00001eb337410 Zea mays HOM05D000095 ORTHO05D000393 2.6e-07 60.5 93 35.5
BcaC06g33144 Brassica carinata HOM05D000095 ORTHO05D000393 9.9e-07 58.5 87 34.5
Cpa.g.sc138.5 Carica papaya HOM05D000095 ORTHO05D000330 9.9e-07 58.5 71 40.8
SalBow3G1840 Salvia bowleyana HOM05D000095 ORTHO05D000393 9.9e-07 58.5 82 39.0
AL2G29240 Arabidopsis lyrata HOM05D000095 ORTHO05D000393 1.3e-06 58.2 121 33.1
FAN20G2895 Fragaria x ananassa HOM05D000095 ORTHO05D208544 1.7e-06 57.8 59 40.7
SalBow3G0130 Salvia bowleyana HOM05D000095 ORTHO05D000393 1.7e-06 57.8 96 38.5
Zm00001eb357780 Zea mays HOM05D000095 ORTHO05D000393 1.7e-06 57.8 146 28.8
Glyma.17G229800 Glycine max HOM05D000095 ORTHO05D000393 2.2e-06 57.4 57 43.9
Rhsim11G0044700 Rhododendron simsii HOM05D000095 ORTHO05D000393 2.2e-06 57.4 57 45.6
arahy.Tifrunner.gnm1.ann1.H8IXR5 Arachis hypogaea HOM05D000095 ORTHO05D000393 2.9e-06 57.0 89 36.0
DCAR_020170 Daucus carota HOM05D000095 ORTHO05D000393 2.9e-06 57.0 117 29.9
FvH4_2g31190 Fragaria vesca HOM05D000095 ORTHO05D035623 2.9e-06 57.0 55 45.5
FAN24G0820 Fragaria x ananassa HOM05D000095 ORTHO05D035623 2.9e-06 57.0 55 45.5
FAN27G1635 Fragaria x ananassa HOM05D000095 ORTHO05D000393 2.9e-06 57.0 55 45.5
Lj7P673T48 Lonicera japonica HOM05D000095 ORTHO05D000393 2.9e-06 57.0 64 39.1
PGR102G3307 Punica granatum HOM05D000095 ORTHO05D000330 2.9e-06 57.0 87 34.5
SalBow6G6783 Salvia bowleyana HOM05D000095 ORTHO05D000330 2.9e-06 57.0 73 37.0
Sed0010972 Sechium edule HOM05D000095 ORTHO05D000393 2.9e-06 57.0 87 34.5
Zm00001eb288890 Zea mays HOM05D000095 ORTHO05D000330 2.9e-06 57.0 54 44.4
A02p19580 Brassica napus HOM05D000095 ORTHO05D000393 3.8e-06 56.6 57 47.4
BraA02t06995Z Brassica rapa HOM05D000095 ORTHO05D000393 3.8e-06 56.6 57 47.4
Mapoly0020s0013 Marchantia polymorpha HOM05D000095 ORTHO05D000393 3.8e-06 56.6 151 29.8
BcaC03g15530 Brassica carinata HOM05D000095 ORTHO05D000393 4.9e-06 56.2 57 47.4
C02p32120 Brassica napus HOM05D000095 ORTHO05D000393 4.9e-06 56.2 131 30.5
PGSC0003DMG400036212 Solanum tuberosum HOM05D000095 ORTHO05D011717 4.9e-06 56.2 108 33.3
Atru.chr9.777 Acer truncatum HOM05D000095 ORTHO05D000330 6.4e-06 55.8 136 27.9
AT5G61620 Arabidopsis thaliana HOM05D000095 ORTHO05D000393 6.4e-06 55.8 87 33.3
Carub.0008s2232 Capsella rubella HOM05D000095 ORTHO05D000393 6.4e-06 55.8 87 33.3
FAN15G3199 Fragaria x ananassa HOM05D000095 ORTHO05D035623 6.4e-06 55.8 66 42.4
FAN20G0524 Fragaria x ananassa HOM05D000095 ORTHO05D000393 6.4e-06 55.8 55 45.5
Lj6A707G44 Lonicera japonica HOM05D000095 ORTHO05D000330 6.4e-06 55.8 87 35.6
Sp2g24830 Schrenkiella parvula HOM05D000095 ORTHO05D000393 6.4e-06 55.8 87 33.3
Sc04g0008730 Simmondsia chinensis HOM05D000095 ORTHO05D000393 6.4e-06 55.8 57 45.6
SGA_v2.0_scaffold60G20829 Striga asiatica HOM05D000095 ORTHO05D000393 6.4e-06 55.8 57 42.1
TWI38G2270 Tripterygium wilfordii HOM05D000095 ORTHO05D000393 6.4e-06 55.8 73 37.0
AT1G70000 Arabidopsis thaliana HOM05D000095 ORTHO05D000393 8.4e-06 55.5 121 31.4
A03p47230 Brassica napus HOM05D000095 ORTHO05D000393 8.4e-06 55.5 87 33.3
BolC2t09248H Brassica oleracea HOM05D000095 ORTHO05D000393 8.4e-06 55.5 131 30.5
BraA03t13850Z Brassica rapa HOM05D000095 ORTHO05D000393 8.4e-06 55.5 87 33.3
CDE09G0369 Ceratophyllum demersum HOM05D000095 ORTHO05D000393 8.4e-06 55.5 82 35.4
FAN24G1244 Fragaria x ananassa HOM05D000095 ORTHO05D046394 8.4e-06 55.5 53 41.5
Manes.14G039400 Manihot esculenta HOM05D000095 ORTHO05D000393 8.4e-06 55.5 94 33.0
Prupe.1G413400 Prunus persica HOM05D000095 ORTHO05D000393 8.4e-06 55.5 107 30.8
unitig_22.g6922 Utricularia gibba HOM05D000095 ORTHO05D000393 8.4e-06 55.5 87 39.1


User provided reference genes

Program Settings