Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN23G1872 Fragaria x ananassa HOM05D004690 ORTHO05D005527 1.4e-57 226.5 147 100.0
FAN23G2407 Fragaria x ananassa HOM05D004690 ORTHO05D005527 1.4e-43 179.9 125 98.4
FAN23G2925 Fragaria x ananassa HOM05D004690 ORTHO05D005527 1.4e-43 179.9 125 98.4
FAN26G1928 Fragaria x ananassa HOM05D004690 ORTHO05D005527 1.7e-39 166.4 128 92.2
FvH4_1g00690 Fragaria vesca HOM05D004690 ORTHO05D005527 1.8e-38 162.9 128 90.6
FAN28G2863 Fragaria x ananassa HOM05D004690 ORTHO05D005527 9.1e-38 160.6 128 90.6
RcHm_v2.0_Chr2g0085411 Rosa chinensis HOM05D004690 ORTHO05D005527 4.8e-31 138.3 135 80.0
QL02p093831 Quercus lobata HOM05D004690 ORTHO05D005527 2.3e-20 102.8 132 50.0
MD02G1005700 Malus domestica HOM05D004690 ORTHO05D005527 8.6e-20 100.9 139 55.4
CiPaw.16G107700 Carya illinoinensis HOM05D004690 ORTHO05D005527 4.2e-19 98.6 128 50.0
Prupe.7G265300 Prunus persica HOM05D004690 ORTHO05D005527 9.5e-19 97.4 135 54.8
Thecc.09G151500 Theobroma cacao HOM05D004690 ORTHO05D005527 1.4e-14 83.6 129 45.7
Haze_19160 Corylus avellana HOM05D004690 ORTHO05D005527 1.8e-14 83.2 131 46.6
Nn8g39976 Nelumbo nucifera HOM05D004690 ORTHO05D005527 4.1e-14 82.0 131 45.8
Cfa020803 Carpinus fangiana HOM05D004690 ORTHO05D005527 2.7e-13 79.3 131 45.8
CANSAT11G0185 Cannabis sativa HOM05D004690 ORTHO05D005527 3.5e-13 79.0 137 48.9
COL.COLO4_23958 Corchorus olitorius HOM05D004690 ORTHO05D005527 3.5e-13 79.0 129 46.5
CSS0044573 Camellia sinensis var. sinensis HOM05D004690 ORTHO05D005527 1.0e-12 77.4 134 42.5
CSS0047585 Camellia sinensis var. sinensis HOM05D004690 ORTHO05D005527 1.0e-12 77.4 134 48.5
Nn2g12436 Nelumbo nucifera HOM05D004690 ORTHO05D005527 1.0e-12 77.4 133 45.1
GSVIVG01023642001 Vitis vinifera HOM05D004690 ORTHO05D005527 1.0e-12 77.4 129 42.6
CiPaw.15G165900 Carya illinoinensis HOM05D004690 ORTHO05D005527 1.3e-12 77.0 105 46.7
Dinv42835 Davidia involucrata HOM05D004690 ORTHO05D005527 3.8e-12 75.5 137 39.4
Dinv43264 Davidia involucrata HOM05D004690 ORTHO05D005527 3.8e-12 75.5 137 39.4
Manes.14G143400 Manihot esculenta HOM05D004690 ORTHO05D005527 6.6e-12 74.7 131 44.3
TAR383G0346 Trochodendron aralioides HOM05D004690 ORTHO05D005527 1.5e-11 73.6 133 44.4
Duzib150G0069 Durio zibethinus HOM05D004690 ORTHO05D005527 1.9e-11 73.2 129 41.9
Potri.018G104000 Populus trichocarpa HOM05D004690 ORTHO05D005527 3.3e-11 72.4 135 40.0
Eucgr.C02505 Eucalyptus grandis HOM05D004690 ORTHO05D005527 7.3e-11 71.2 147 38.8
Sabra18G0089400 Salix brachista HOM05D004690 ORTHO05D005527 7.3e-11 71.2 135 39.3
Carub.0004s0323 Capsella rubella HOM05D004690 ORTHO05D005527 9.5e-11 70.9 132 40.9
Ciclev10009165m.g Citrus clementina HOM05D004690 ORTHO05D005527 9.5e-11 70.9 131 41.2
Hma1.2p1_0028F.1_g017650 Hydrangea macrophylla HOM05D004690 ORTHO05D005527 9.5e-11 70.9 136 41.2
AL4G14110 Arabidopsis lyrata HOM05D004690 ORTHO05D005527 1.2e-10 70.5 134 43.3
A04p18380 Brassica napus HOM05D004690 ORTHO05D005527 1.2e-10 70.5 131 42.7
Thhalv10000269m.g Eutrema salsugineum HOM05D004690 ORTHO05D005527 1.6e-10 70.1 136 45.6
BcaC02g08501 Brassica carinata HOM05D004690 ORTHO05D005527 2.1e-10 69.7 131 42.7
BolC4t26921H Brassica oleracea HOM05D004690 ORTHO05D005527 2.1e-10 69.7 131 42.7
Hund08935 Selenicereus undatus HOM05D004690 ORTHO05D005527 2.1e-10 69.7 130 45.4
C04p53650 Brassica napus HOM05D004690 ORTHO05D005527 3.6e-10 68.9 131 42.7
Gohir.A07G037900 Gossypium hirsutum HOM05D004690 ORTHO05D005527 3.6e-10 68.9 129 43.4
Gorai.001G044800 Gossypium raimondii HOM05D004690 ORTHO05D005527 3.6e-10 68.9 129 43.4
Solyc07g005830.3 Solanum lycopersicum HOM05D004690 ORTHO05D005527 3.6e-10 68.9 132 49.2
BraA04t17449Z Brassica rapa HOM05D004690 ORTHO05D005527 4.7e-10 68.6 130 40.0
Rhsim01G0027300 Rhododendron simsii HOM05D004690 ORTHO05D005527 4.7e-10 68.6 134 53.7
Peaxi162Scf00401g00330 Petunia axillaris HOM05D004690 ORTHO05D005527 6.1e-10 68.2 134 53.0
AT2G24060 Arabidopsis thaliana HOM05D004690 ORTHO05D005527 8.0e-10 67.8 132 41.7
Gohir.D07G042000 Gossypium hirsutum HOM05D004690 ORTHO05D005527 8.0e-10 67.8 129 42.6
Sopen07g001930 Solanum pennellii HOM05D004690 ORTHO05D005527 8.0e-10 67.8 132 49.2
BcaB06g27964 Brassica carinata HOM05D004690 ORTHO05D005527 1.0e-09 67.4 130 40.0
Hma1.2p1_0028F.1_g017670 Hydrangea macrophylla HOM05D004690 ORTHO05D005527 1.4e-09 67.0 139 38.1
MD15G1150400 Malus domestica HOM05D004690 ORTHO05D005527 1.4e-09 67.0 46 76.1
Glyma.02G205700 Glycine max HOM05D004690 ORTHO05D005527 1.8e-09 66.6 130 53.1
Carub.0007s0984 Capsella rubella HOM05D004690 ORTHO05D005527 2.3e-09 66.2 136 44.1
Cpa.g.sc46.177 Carica papaya HOM05D004690 ORTHO05D005527 2.3e-09 66.2 134 39.6
Cc06_g14700 Coffea canephora HOM05D004690 ORTHO05D005527 2.3e-09 66.2 125 48.8
PGR102G1430 Punica granatum HOM05D004690 ORTHO05D005527 3.1e-09 65.9 128 40.6
Lsat_1_v5_gn_5_89380 Lactuca sativa HOM05D004690 ORTHO05D005527 6.8e-09 64.7 128 43.0
Lj4g0007308 Lotus japonicus HOM05D004690 ORTHO05D005527 6.8e-09 64.7 133 41.4
PGSC0003DMG400011147 Solanum tuberosum HOM05D004690 ORTHO05D005527 6.8e-09 64.7 132 47.7
arahy.Tifrunner.gnm1.ann1.VFXC0H Arachis hypogaea HOM05D004690 ORTHO05D005527 8.9e-09 64.3 129 39.5
arahy.Tifrunner.gnm1.ann1.RJ6BPE Arachis hypogaea HOM05D004690 ORTHO05D005527 1.2e-08 63.9 129 39.5
CARHR118290 Cardamine hirsuta HOM05D004690 ORTHO05D005527 1.2e-08 63.9 137 40.1
MBI15_g27186_MAGBIO Magnolia biondii HOM05D004690 ORTHO05D005527 1.2e-08 63.9 130 39.2
Sp4g02970 Schrenkiella parvula HOM05D004690 ORTHO05D005527 1.2e-08 63.9 137 42.3
Sp7g28600 Schrenkiella parvula HOM05D004690 ORTHO05D005527 1.2e-08 63.9 134 45.5
Sc18g0003050 Simmondsia chinensis HOM05D004690 ORTHO05D005527 1.2e-08 63.9 104 43.3
CDE02G3377 Ceratophyllum demersum HOM05D004690 ORTHO05D005527 1.5e-08 63.5 137 37.2
Glyma.17G072300 Glycine max HOM05D004690 ORTHO05D005527 2.0e-08 63.2 130 56.2
PSO111G0014 Papaver somniferum HOM05D004690 ORTHO05D005527 2.6e-08 62.8 139 38.8
ECA234G3490 Erigeron canadensis HOM05D004690 ORTHO05D005527 3.4e-08 62.4 125 48.0
HanXRQChr10g0307591 Helianthus annuus HOM05D004690 ORTHO05D005527 3.4e-08 62.4 126 41.3
Oeu054266.1 Olea europaea HOM05D004690 ORTHO05D005527 3.4e-08 62.4 45 66.7
A03p60250 Brassica napus HOM05D004690 ORTHO05D005527 4.4e-08 62.0 135 41.5
BraA03t15065Z Brassica rapa HOM05D004690 ORTHO05D005527 4.4e-08 62.0 46 65.2
PSO782G2525 Papaver somniferum HOM05D004690 ORTHO05D005527 5.8e-08 61.6 139 38.1
Aa31LG7G12770 Aethionema arabicum HOM05D004690 ORTHO05D005527 7.5e-08 61.2 142 40.8
Dinv41359 Davidia involucrata HOM05D004690 ORTHO05D005527 1.3e-07 60.5 47 61.7
BcaNung02747 Brassica carinata HOM05D004690 ORTHO05D005527 1.7e-07 60.1 137 43.1
C07p58160 Brassica napus HOM05D004690 ORTHO05D005527 1.7e-07 60.1 137 43.1
BolC7t46275H Brassica oleracea HOM05D004690 ORTHO05D005527 1.7e-07 60.1 137 43.1
CARHR238570 Cardamine hirsuta HOM05D004690 ORTHO05D005527 1.7e-07 60.1 137 40.9
Hma1.2p1_0222F.1_g093770 Hydrangea macrophylla HOM05D004690 ORTHO05D005527 1.7e-07 60.1 130 36.9
BcaB06g27963 Brassica carinata HOM05D004690 ORTHO05D005527 2.2e-07 59.7 46 65.2
Thhalv10025935m.g Eutrema salsugineum HOM05D004690 ORTHO05D005527 2.9e-07 59.3 44 65.9
HanXRQChr05g0138951 Helianthus annuus HOM05D004690 ORTHO05D005527 2.9e-07 59.3 46 63.0
AT4G30690 Arabidopsis thaliana HOM05D004690 ORTHO05D005527 3.7e-07 58.9 128 39.8
ECA236G1766 Erigeron canadensis HOM05D004690 ORTHO05D005527 3.7e-07 58.9 46 63.0
MSTRG.10705 Avicennia marina HOM05D004690 ORTHO05D005527 4.9e-07 58.5 127 37.0
DCAR_017916 Daucus carota HOM05D004690 ORTHO05D005527 4.9e-07 58.5 118 37.3
Actinidia38313 Actinidia chinensis HOM05D004690 ORTHO05D005527 6.4e-07 58.2 149 36.2
Lsat_1_v5_gn_8_63881 Lactuca sativa HOM05D004690 ORTHO05D005527 6.4e-07 58.2 46 63.0
Ah.09g228780 Amaranthus hybridus HOM05D004690 ORTHO05D005527 8.3e-07 57.8 46 65.2
TWI63G1092 Tripterygium wilfordii HOM05D004690 ORTHO05D005527 8.3e-07 57.8 136 39.0
ATR0019G027 Amborella trichopoda HOM05D004690 ORTHO05D005527 1.9e-06 56.6 46 58.7
Sed0014938 Sechium edule HOM05D004690 ORTHO05D005527 1.9e-06 56.6 150 34.0
Migut.K00308 Erythranthe guttata HOM05D004690 ORTHO05D005527 2.4e-06 56.2 127 41.7
Lalb_Chr12g0198781 Lupinus albus HOM05D004690 ORTHO05D005527 2.4e-06 56.2 130 54.6
unitig_899.g15465 Utricularia gibba HOM05D004690 ORTHO05D005527 2.4e-06 56.2 132 33.3
Atru.chr7.16 Acer truncatum HOM05D004690 ORTHO05D005527 3.2e-06 55.8 46 60.9
Psat7g006440 Pisum sativum HOM05D004690 ORTHO05D005527 3.2e-06 55.8 46 56.5
AL7G21430 Arabidopsis lyrata HOM05D004690 ORTHO05D005527 4.1e-06 55.5 135 45.2
Sed0017216 Sechium edule HOM05D004690 ORTHO05D005527 4.1e-06 55.5 152 34.9
VMungo1215G2193 Vigna mungo HOM05D004690 ORTHO05D005527 4.1e-06 55.5 130 50.0
Ca_21142_v3 Cicer arietinum L. HOM05D004690 ORTHO05D005527 7.0e-06 54.7 127 37.8
ClCG02G014380 Citrullus lanatus HOM05D004690 ORTHO05D005527 7.0e-06 54.7 152 33.6
Potri.006G182000 Populus trichocarpa HOM05D004690 ORTHO05D005527 7.0e-06 54.7 44 63.6
SalBow1G0331 Salvia bowleyana HOM05D004690 ORTHO05D005527 7.0e-06 54.7 128 43.8


User provided reference genes

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