Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN23G1796 Fragaria x ananassa HOM05D006928 ORTHO05D008618 2.1e-43 178.7 94 100.0
FAN28G2803 Fragaria x ananassa HOM05D006928 ORTHO05D008618 2.1e-43 178.7 94 100.0
FvH4_1g23590 Fragaria vesca HOM05D006928 ORTHO05D008618 4.6e-43 177.6 94 98.9
FAN19G2906 Fragaria x ananassa HOM05D006928 ORTHO05D008618 4.6e-43 177.6 94 98.9
RcHm_v2.0_Chr2g0119151 Rosa chinensis HOM05D006928 ORTHO05D008618 1.1e-41 172.9 94 96.8
Gohir.A02G138100 Gossypium hirsutum HOM05D006928 ORTHO05D008618 2.8e-40 168.3 94 91.5
Gohir.D03G048800 Gossypium hirsutum HOM05D006928 ORTHO05D008618 2.8e-40 168.3 94 91.5
Gorai.003G050100 Gossypium raimondii HOM05D006928 ORTHO05D008618 2.8e-40 168.3 94 91.5
Duzib264G0933 Durio zibethinus HOM05D006928 ORTHO05D008618 2.0e-38 162.2 94 87.2
COL.COLO4_22417 Corchorus olitorius HOM05D006928 ORTHO05D008618 3.4e-38 161.4 94 88.3
MD15G1343100 Malus domestica HOM05D006928 ORTHO05D008618 9.9e-38 159.8 94 86.2
Prupe.6G162900 Prunus persica HOM05D006928 ORTHO05D008618 9.9e-38 159.8 94 85.1
Manes.12G150300 Manihot esculenta HOM05D006928 ORTHO05D008618 2.9e-37 158.3 94 86.2
Atru.chr4.541 Acer truncatum HOM05D006928 ORTHO05D008618 8.4e-37 156.8 94 85.1
Cfa002868 Carpinus fangiana HOM05D006928 ORTHO05D008618 8.4e-37 156.8 94 84.0
Thecc.01G120800 Theobroma cacao HOM05D006928 ORTHO05D008618 8.4e-37 156.8 88 88.6
Eucgr.I00245 Eucalyptus grandis HOM05D006928 ORTHO05D008618 1.1e-36 156.4 94 85.1
MBI09_g18622_MAGBIO Magnolia biondii HOM05D006928 ORTHO05D008618 1.4e-36 156.0 94 83.0
MBI09_g20115_MAGBIO Magnolia biondii HOM05D006928 ORTHO05D008618 1.4e-36 156.0 94 83.0
PGR119G2472 Punica granatum HOM05D006928 ORTHO05D008618 1.4e-36 156.0 93 83.9
GSVIVG01026587001 Vitis vinifera HOM05D006928 ORTHO05D008618 2.4e-36 155.2 94 83.0
Duzib187G1761 Durio zibethinus HOM05D006928 ORTHO05D008618 3.2e-36 154.8 94 84.0
CANSAT01G1375 Cannabis sativa HOM05D006928 ORTHO05D008618 4.2e-36 154.5 94 84.0
Glyma.08G146400 Glycine max HOM05D006928 ORTHO05D008618 4.2e-36 154.5 94 81.9
ClCG02G000690 Citrullus lanatus HOM05D006928 ORTHO05D008618 5.4e-36 154.1 95 84.2
Glyma.05G188300 Glycine max HOM05D006928 ORTHO05D008618 7.1e-36 153.7 94 83.0
Lj4g0006915 Lotus japonicus HOM05D006928 ORTHO05D008618 7.1e-36 153.7 94 79.8
Sabra16G0195000 Salix brachista HOM05D006928 ORTHO05D008618 7.1e-36 153.7 94 84.0
Sed0020530 Sechium edule HOM05D006928 ORTHO05D008618 9.3e-36 153.3 95 84.2
Dinv09934 Davidia involucrata HOM05D006928 ORTHO05D008618 1.6e-35 152.5 94 81.9
Phvul.002G269100 Phaseolus vulgaris HOM05D006928 ORTHO05D008618 1.6e-35 152.5 94 83.0
CsaV3_2G018080 Cucumis sativus L. HOM05D006928 ORTHO05D008618 2.7e-35 151.8 95 84.2
Psat7g048720 Pisum sativum HOM05D006928 ORTHO05D008618 4.6e-35 151.0 94 79.8
TPR.G2179 Trifolium pratense HOM05D006928 ORTHO05D008618 4.6e-35 151.0 94 79.8
TWI75G0630 Tripterygium wilfordii HOM05D006928 ORTHO05D008618 6.0e-35 150.6 94 83.0
CiPaw.04G083900 Carya illinoinensis HOM05D006928 ORTHO05D008618 7.9e-35 150.2 94 80.9
Actinidia17615 Actinidia chinensis HOM05D006928 ORTHO05D008618 1.3e-34 149.4 94 81.9
Hund03424 Selenicereus undatus HOM05D006928 ORTHO05D008618 1.3e-34 149.4 89 83.1
Aqoxy3G02632 Aquilegia oxysepala HOM05D006928 ORTHO05D008618 1.8e-34 149.1 92 82.6
Peaxi162Scf00025g02217 Petunia axillaris HOM05D006928 ORTHO05D008618 1.8e-34 149.1 94 80.9
Potri.001G309200 Populus trichocarpa HOM05D006928 ORTHO05D008618 2.3e-34 148.7 94 83.0
Lalb_Chr12g0203321 Lupinus albus HOM05D006928 ORTHO05D008618 3.9e-34 147.9 89 82.0
CSS0007569 Camellia sinensis var. sinensis HOM05D006928 ORTHO05D008618 6.7e-34 147.1 88 84.1
CSS0018620 Camellia sinensis var. sinensis HOM05D006928 ORTHO05D008618 6.7e-34 147.1 88 84.1
AUR62003624 Chenopodium quinoa HOM05D006928 ORTHO05D008618 6.7e-34 147.1 90 81.1
Ciclev10026852m.g Citrus clementina HOM05D006928 ORTHO05D008618 6.7e-34 147.1 86 84.9
Nn1g06098 Nelumbo nucifera HOM05D006928 ORTHO05D008618 8.7e-34 146.7 93 77.4
THA.LOC104818466 Tarenaya hassleriana HOM05D006928 ORTHO05D008618 1.1e-33 146.4 81 90.1
AL8G42110 Arabidopsis lyrata HOM05D006928 ORTHO05D008618 1.5e-33 146.0 92 80.4
Cc00_g00790 Coffea canephora HOM05D006928 ORTHO05D008618 1.5e-33 146.0 94 78.7
Cc07_g17360 Coffea canephora HOM05D006928 ORTHO05D008618 1.5e-33 146.0 94 78.7
Nitab4.5_0010284g0020 Nicotiana tabacum HOM05D006928 ORTHO05D008618 1.5e-33 146.0 94 79.8
EL10Ac6g15253 Beta vulgaris HOM05D006928 ORTHO05D008618 3.3e-33 144.8 90 80.0
TAR381G0700 Trochodendron aralioides HOM05D006928 ORTHO05D008618 3.3e-33 144.8 89 80.9
Aa31LG1G17250 Aethionema arabicum HOM05D006928 ORTHO05D008618 5.6e-33 144.1 81 87.7
THA.LOC104799431 Tarenaya hassleriana HOM05D006928 ORTHO05D008618 5.6e-33 144.1 86 83.7
Thhalv10005190m.g Eutrema salsugineum HOM05D006928 ORTHO05D008618 7.4e-33 143.7 81 86.4
BcaB04g19985 Brassica carinata HOM05D006928 ORTHO05D008618 1.3e-32 142.9 80 87.5
HanXRQChr15g0471661 Helianthus annuus HOM05D006928 ORTHO05D008618 1.6e-32 142.5 94 74.5
Nitab4.5_0002064g0030 Nicotiana tabacum HOM05D006928 ORTHO05D008618 1.6e-32 142.5 94 77.7
PSO541G1601 Papaver somniferum HOM05D006928 ORTHO05D008618 2.8e-32 141.7 94 78.7
Sp2g27750 Schrenkiella parvula HOM05D006928 ORTHO05D008618 2.8e-32 141.7 85 82.4
Sp6g33580 Schrenkiella parvula HOM05D006928 ORTHO05D008618 2.8e-32 141.7 93 79.6
Sc16g0003960 Simmondsia chinensis HOM05D006928 ORTHO05D008618 3.7e-32 141.4 91 79.1
BraA09t36529Z Brassica rapa HOM05D006928 ORTHO05D008618 6.2e-32 140.6 80 86.2
Carub.0008s2549 Capsella rubella HOM05D006928 ORTHO05D008618 6.2e-32 140.6 91 76.9
Thhalv10015138m.g Eutrema salsugineum HOM05D006928 ORTHO05D008618 8.1e-32 140.2 81 85.2
CDE12G0365 Ceratophyllum demersum HOM05D006928 ORTHO05D008618 1.4e-31 139.4 93 75.3
PSO675G6866 Papaver somniferum HOM05D006928 ORTHO05D008618 1.4e-31 139.4 94 77.7
MSTRG.2691 Avicennia marina HOM05D006928 ORTHO05D008618 1.8e-31 139.0 92 80.4
CARHR278670 Cardamine hirsuta HOM05D006928 ORTHO05D008618 1.8e-31 139.0 91 75.8
AL6G20240 Arabidopsis lyrata HOM05D006928 ORTHO05D008618 3.1e-31 138.3 79 87.3
BolC9t53907H Brassica oleracea HOM05D006928 ORTHO05D008618 4.0e-31 137.9 80 83.8
ECA238G4197 Erigeron canadensis HOM05D006928 ORTHO05D008618 4.0e-31 137.9 91 75.8
DCAR_027258 Daucus carota HOM05D006928 ORTHO05D008618 5.3e-31 137.5 93 78.5
AT5G09830 Arabidopsis thaliana HOM05D006928 ORTHO05D008618 9.0e-31 136.7 79 84.8
Solyc11g005360.2 Solanum lycopersicum HOM05D006928 ORTHO05D008618 2.0e-30 135.6 90 78.9
Sopen11g001370 Solanum pennellii HOM05D006928 ORTHO05D008618 2.0e-30 135.6 90 78.9
Carub.0006s0825 Capsella rubella HOM05D006928 ORTHO05D008618 2.6e-30 135.2 91 80.2
Pp3c4_15580 Physcomitrium patens HOM05D006928 ORTHO05D008618 2.6e-30 135.2 94 74.5
A10p27630 Brassica napus HOM05D006928 ORTHO05D008618 4.5e-30 134.4 79 84.8
Lsat_1_v5_gn_2_66720 Lactuca sativa HOM05D006928 ORTHO05D008618 5.8e-30 134.0 94 73.4
BcaB08g37169 Brassica carinata HOM05D006928 ORTHO05D008618 7.6e-30 133.7 91 78.0
C09p67690 Brassica napus HOM05D006928 ORTHO05D008618 7.6e-30 133.7 91 78.0
BolC9t59531H Brassica oleracea HOM05D006928 ORTHO05D008618 7.6e-30 133.7 91 78.0
Migut.H01113 Erythranthe guttata HOM05D006928 ORTHO05D008618 1.7e-29 132.5 83 79.5
BraA10t44815Z Brassica rapa HOM05D006928 ORTHO05D008618 2.2e-29 132.1 91 76.9
BcaC04g23298 Brassica carinata HOM05D006928 ORTHO05D008618 3.8e-29 131.3 89 76.4
AagrBONN_evm.TU.Sc2ySwM_344.3776 Anthoceros agrestis HOM05D006928 ORTHO05D008618 1.1e-28 129.8 89 71.9
CDE04G1901 Ceratophyllum demersum HOM05D006928 ORTHO05D008618 1.9e-28 129.0 90 75.6
Haze_25192 Corylus avellana HOM05D006928 ORTHO05D008618 7.1e-28 127.1 74 86.5
Haze_25197 Corylus avellana HOM05D006928 ORTHO05D008618 7.1e-28 127.1 159 49.1
Mapoly0023s0156 Marchantia polymorpha HOM05D006928 ORTHO05D008618 9.3e-28 126.7 83 73.5
SMO351G0462 Selaginella moellendorffii HOM05D006928 ORTHO05D008618 1.2e-27 126.3 94 69.1
QL06p051863 Quercus lobata HOM05D006928 ORTHO05D008618 1.6e-27 125.9 75 86.7
Haze_25196 Corylus avellana HOM05D006928 ORTHO05D008618 2.1e-27 125.6 73 86.3
HPP92_027450 Vanilla planifolia HOM05D006928 ORTHO05D008618 2.1e-27 125.6 81 76.5
TAR376G0498 Trochodendron aralioides HOM05D006928 ORTHO05D008618 3.9e-26 121.3 77 80.5
Actinidia26282 Actinidia chinensis HOM05D006928 ORTHO05D008618 6.7e-26 120.6 82 74.4
Rhsim08G0003500 Rhododendron simsii HOM05D002612 ORTHO05D008618 1.5e-25 119.4 80 77.5
Zm00001eb146740 Zea mays HOM05D006928 ORTHO05D008618 2.5e-25 118.6 96 67.7
Ah.03g146570 Amaranthus hybridus HOM05D006928 ORTHO05D008618 4.3e-25 117.9 73 80.8
Medtr8g092690 Medicago truncatula HOM05D006928 ORTHO05D008618 4.3e-25 117.9 73 79.5
Cpa.g.sc1003.1 Carica papaya HOM05D006928 ORTHO05D008618 5.6e-25 117.5 73 80.8
AUR62017933 Chenopodium quinoa HOM05D006928 ORTHO05D008618 2.1e-24 115.5 83 73.5
C09p09990 Brassica napus HOM05D006928 ORTHO05D008618 3.7e-24 114.8 83 72.3
CAN.G249.11 Capsicum annuum HOM05D006928 ORTHO05D008618 3.1e-23 111.7 73 78.1
SGA_v2.0_scaffold137G35109 Striga asiatica HOM05D006928 ORTHO05D008618 6.9e-23 110.5 82 73.2
SalBow1G8150 Salvia bowleyana HOM05D006928 ORTHO05D008618 1.3e-21 106.3 74 75.7
CARHR203570 Cardamine hirsuta HOM05D006928 ORTHO05D008618 2.2e-21 105.5 60 83.3
unitig_0.g37 Utricularia gibba HOM05D006928 ORTHO05D008618 3.8e-21 104.8 69 76.8
CBR_g19927 Chara braunii HOM05D006928 ORTHO05D008618 1.1e-20 103.2 80 66.2
BcaB08g37178 Brassica carinata HOM05D006928 ORTHO05D008618 4.6e-19 97.8 91 61.5
Cre03.g164550 Chlamydomonas reinhardtii HOM05D006928 ORTHO05D008618 1.3e-18 96.3 79 62.0
SEGI_33222 Sequoiadendron giganteum HOM05D006928 ORTHO05D008618 3.3e-17 91.7 107 52.3
Os01g0866600 Oryza sativa ssp. japonica HOM05D006928 ORTHO05D008618 1.3e-16 89.7 68 69.1


User provided reference genes

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