Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN23G1728 Fragaria x ananassa HOM05D002664 ORTHO05D002974 3.4e-209 731.5 392 100.0
FAN26G3299 Fragaria x ananassa HOM05D002664 ORTHO05D002974 2.3e-88 330.1 511 48.9
FAN26G0702 Fragaria x ananassa HOM05D002664 ORTHO05D002974 2.7e-73 280.0 520 45.2
FAN19G0372 Fragaria x ananassa HOM05D002664 ORTHO05D002974 5.2e-72 275.8 520 42.9
FAN28G1456 Fragaria x ananassa HOM05D002664 ORTHO05D002974 6.8e-72 275.4 521 45.1
FAN23G0756 Fragaria x ananassa HOM05D002664 ORTHO05D002974 7.5e-71 271.9 519 44.3
FvH4_1g24020 Fragaria vesca HOM05D002664 ORTHO05D002974 1.3e-67 261.2 501 44.7
RcHm_v2.0_Chr2g0120161 Rosa chinensis HOM05D002664 ORTHO05D002974 5.7e-63 245.7 523 38.0
RcHm_v2.0_Chr1g0373991 Rosa chinensis HOM05D002664 ORTHO05D002974 4.4e-23 113.2 515 27.8
FAN06G3235 Fragaria x ananassa HOM05D002664 ORTHO05D002974 1.1e-21 108.6 509 26.9
FAN01G1141 Fragaria x ananassa HOM05D002664 ORTHO05D002974 1.2e-20 105.1 224 37.1
FvH4_7g27150 Fragaria vesca HOM05D002664 ORTHO05D002974 5.1e-19 99.8 513 26.9
FAN06G0230 Fragaria x ananassa HOM05D002664 ORTHO05D002974 3.8e-14 83.6 444 25.0
Glyma.15G217800 Glycine max HOM05D002664 ORTHO05D002974 4.9e-14 83.2 373 27.1
CsaV3_5G001230 Cucumis sativus L. HOM05D002664 ORTHO05D002974 1.2e-12 78.6 329 25.8
Phvul.011G181300 Phaseolus vulgaris HOM05D002664 ORTHO05D002974 3.5e-12 77.0 385 27.8
VMungo1127G2068 Vigna mungo HOM05D002664 ORTHO05D002974 3.5e-12 77.0 371 27.8
MELO3C005824.2 Cucumis melo HOM05D002664 ORTHO05D002974 1.3e-11 75.1 328 25.6
Thecc.03G151700 Theobroma cacao HOM05D002664 ORTHO05D002974 5.1e-11 73.2 220 32.7
Psat4g186400 Pisum sativum HOM05D002664 ORTHO05D002974 6.7e-11 72.8 364 27.2
Prupe.2G274700 Prunus persica HOM05D002664 ORTHO05D002974 5.6e-10 69.7 96 47.9
ClCG01G001100 Citrullus lanatus HOM05D002664 ORTHO05D002974 9.6e-10 68.9 382 24.3
Sed0022620 Sechium edule HOM05D002664 ORTHO05D002974 9.6e-10 68.9 328 27.1
COL.COLO4_14079 Corchorus olitorius HOM05D002664 ORTHO05D002974 2.1e-09 67.8 481 24.3
Cfa008177 Carpinus fangiana HOM05D002664 ORTHO05D002974 4.8e-09 66.6 362 27.3
SHI14034 Sapria himalayana HOM05D002664 ORTHO05D002974 4.8e-09 66.6 97 44.3
Gohir.A07G042500 Gossypium hirsutum HOM05D002664 ORTHO05D002974 8.1e-09 65.9 361 28.3
Dinv06579 Davidia involucrata HOM05D002664 ORTHO05D002974 1.1e-08 65.5 103 42.7
vmacro06820 Vaccinium macrocarpon HOM05D002664 ORTHO05D002974 1.1e-08 65.5 56 58.9
Gorai.001G049900 Gossypium raimondii HOM05D002664 ORTHO05D002974 1.8e-08 64.7 369 27.1
Lj3g0010591 Lotus japonicus HOM05D002664 ORTHO05D002974 1.8e-08 64.7 404 25.0
PGSC0003DMG400018845 Solanum tuberosum HOM05D002664 ORTHO05D002974 1.8e-08 64.7 352 25.9
Peaxi162Scf00271g00835 Petunia axillaris HOM05D002664 ORTHO05D002974 2.4e-08 64.3 113 39.8
Gohir.D07G046800 Gossypium hirsutum HOM05D002664 ORTHO05D002974 3.1e-08 63.9 369 27.1
QL09p019762 Quercus lobata HOM05D002664 ORTHO05D002974 6.9e-08 62.8 98 39.8
Ca_23528_v3 Cicer arietinum L. HOM05D002664 ORTHO05D002974 1.2e-07 62.0 213 30.0
Lalb_Chr19g0133131 Lupinus albus HOM05D002664 ORTHO05D002974 1.2e-07 62.0 391 26.3
Ca_23768_v3 Cicer arietinum L. HOM05D002664 ORTHO05D002974 1.5e-07 61.6 211 30.3
Nitab4.5_0001267g0070 Nicotiana tabacum HOM05D002664 ORTHO05D002974 2.0e-07 61.2 377 26.3
Aqoxy7G00809 Aquilegia oxysepala HOM05D002664 ORTHO05D002974 3.4e-07 60.5 83 43.4
Duzib084G0261 Durio zibethinus HOM05D002664 ORTHO05D002974 3.4e-07 60.5 201 32.3
Nitab4.5_0001358g0010 Nicotiana tabacum HOM05D002664 ORTHO05D002974 3.4e-07 60.5 375 25.3
Rhsim03G0164400 Rhododendron simsii HOM05D002664 ORTHO05D002974 4.5e-07 60.1 94 41.5
Solyc03g093370.2 Solanum lycopersicum HOM05D002664 ORTHO05D002974 4.5e-07 60.1 112 36.6
Sopen03g024180 Solanum pennellii HOM05D002664 ORTHO05D002974 4.5e-07 60.1 112 36.6
TPR.G19287 Trifolium pratense HOM05D002664 ORTHO05D002974 4.5e-07 60.1 202 29.7
Duzib205G0977 Durio zibethinus HOM05D002664 ORTHO05D002974 5.8e-07 59.7 150 34.7
PGR042G3927 Punica granatum HOM05D002664 ORTHO05D002974 5.8e-07 59.7 362 26.2
Nn1g00921 Nelumbo nucifera HOM05D002664 ORTHO05D002974 7.6e-07 59.3 120 35.8
DCAR_009450 Daucus carota HOM05D002664 ORTHO05D002974 1.3e-06 58.5 98 40.8
unitig_52.g17768 Utricularia gibba HOM05D002664 ORTHO05D002974 1.3e-06 58.5 142 33.8
CAN.G485.5 Capsicum annuum HOM05D002664 ORTHO05D002974 2.2e-06 57.8 159 30.8
Manes.14G037800 Manihot esculenta HOM05D002664 ORTHO05D002974 2.2e-06 57.8 202 32.7
Sed0006781 Sechium edule HOM05D002664 ORTHO05D002974 2.2e-06 57.8 162 31.5
CiPaw.03G093900 Carya illinoinensis HOM05D002664 ORTHO05D002974 2.9e-06 57.4 382 26.4
Glyma.08G232300 Glycine max HOM05D002664 ORTHO05D002974 2.9e-06 57.4 221 28.1
Rhsim09G0190200 Rhododendron simsii HOM05D002664 ORTHO05D002974 2.9e-06 57.4 497 23.7
Atru.chr1.849 Acer truncatum HOM05D002664 ORTHO05D002974 3.8e-06 57.0 141 33.3
TPR.G9425 Trifolium pratense HOM05D002664 ORTHO05D002974 4.9e-06 56.6 217 29.5
MD01G1180700 Malus domestica HOM05D002664 ORTHO05D002974 6.4e-06 56.2 353 26.3
Medtr8g446550 Medicago truncatula HOM05D002664 ORTHO05D002974 6.4e-06 56.2 207 28.5
MD07G1251100 Malus domestica HOM05D002664 ORTHO05D002974 8.4e-06 55.8 357 26.1
Sabra01G0097900 Salix brachista HOM05D002664 ORTHO05D002974 8.4e-06 55.8 94 37.2


User provided reference genes

Program Settings