Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN23G1528 Fragaria x ananassa HOM05D012473 ORTHO05D010844 0.0e+00 1323.9 740 100.0
FAN28G1165 Fragaria x ananassa HOM05D012473 ORTHO05D010844 0.0e+00 1139.4 733 87.0
FAN26G1572 Fragaria x ananassa HOM05D012473 ORTHO05D010844 0.0e+00 1099.3 733 88.3
FAN19G1264 Fragaria x ananassa HOM05D012473 ORTHO05D010844 2.1e-308 1062.0 763 79.9
FvH4_1g25520 Fragaria vesca HOM05D012473 ORTHO05D010844 8.8e-299 1030.0 754 79.6
FvH4_5g34270 Fragaria vesca HOM05D012473 ORTHO05D010844 5.8e-157 558.9 370 83.0
MD15G1138700 Malus domestica HOM05D012473 ORTHO05D010844 7.2e-83 312.8 818 38.8
FAN08G2906 Fragaria x ananassa HOM05D012473 ORTHO05D010844 3.5e-69 267.3 549 40.3
Haze_16528 Corylus avellana HOM05D012473 ORTHO05D010844 2.6e-32 144.8 718 28.1
Thecc.01G142200 Theobroma cacao HOM05D012218 ORTHO05D010844 6.4e-31 140.2 788 27.8
QL10p005044 Quercus lobata HOM05D012473 ORTHO05D010844 1.6e-29 135.6 841 29.8
Cfa001988 Carpinus fangiana HOM05D012473 ORTHO05D010844 6.9e-25 120.2 730 26.8
Potri.007G098300 Populus trichocarpa HOM05D012218 ORTHO05D017165 3.8e-23 114.4 792 28.7
Sabra07G0081700 Salix brachista HOM05D012218 ORTHO05D017165 1.4e-22 112.5 800 29.6
CiPaw.03G115200 Carya illinoinensis HOM05D012218 ORTHO05D010844 3.2e-22 111.3 994 26.9
Gorai.012G037100 Gossypium raimondii HOM05D012218 ORTHO05D010844 1.9e-19 102.1 792 27.1
Gohir.A05G382500 Gossypium hirsutum HOM05D012218 ORTHO05D010844 4.3e-19 100.9 796 25.5
QL02p071969 Quercus lobata HOM05D012473 ORTHO05D010844 2.4e-17 95.1 797 27.9
Gohir.D04G032700 Gossypium hirsutum HOM05D012218 ORTHO05D010844 5.8e-16 90.5 795 25.4
Lj2g0023112 Lotus japonicus HOM05D012459 ORTHO05D010844 7.6e-16 90.1 873 25.2
Phvul.004G137400 Phaseolus vulgaris HOM05D012459 ORTHO05D010844 9.9e-16 89.7 816 23.8
Cpa.g.sc37.40 Carica papaya HOM05D001512 ORTHO05D001574 1.3e-15 89.4 393 30.3
Duzib187G0544 Durio zibethinus HOM05D012218 ORTHO05D010844 1.3e-15 89.4 691 25.6
FvH4_5g34280 Fragaria vesca HOM05D012473 ORTHO05D010844 3.8e-15 87.8 119 55.5
Medtr6g078430 Medicago truncatula HOM05D012459 ORTHO05D010844 7.9e-13 80.1 784 25.3
Ca_25366_v3 Cicer arietinum L. HOM05D012459 ORTHO05D010844 2.5e-11 75.1 837 25.4
TAR381G1694 Trochodendron aralioides HOM05D012218 ORTHO05D010844 3.3e-11 74.7 967 22.9
Manes.05G184500 Manihot esculenta HOM05D012218 ORTHO05D010844 5.6e-11 73.9 806 26.2
Psat0s4832g0040 Pisum sativum HOM05D012459 ORTHO05D010844 2.1e-10 72.0 269 34.9
THA.LOC104800245 Tarenaya hassleriana HOM05D009813 ORTHO05D011936 2.1e-10 72.0 730 27.5
Dinv07458 Davidia involucrata HOM05D010873 ORTHO05D013124 2.8e-10 71.6 578 24.4
Glyma.09G162200 Glycine max HOM05D012459 ORTHO05D010844 1.1e-09 69.7 519 26.6
Sp2g26820 Schrenkiella parvula HOM05D009813 ORTHO05D011936 1.1e-09 69.7 149 43.6
Glyma.16G211200 Glycine max HOM05D012459 ORTHO05D010844 1.8e-09 68.9 813 24.4
CSS0038628 Camellia sinensis var. sinensis HOM05D017996 ORTHO05D017165 2.4e-09 68.6 156 34.0
CSS0006956 Camellia sinensis var. sinensis HOM05D017996 ORTHO05D017165 4.0e-09 67.8 134 35.8
CSS0018747 Camellia sinensis var. sinensis HOM05D017996 ORTHO05D017165 4.0e-09 67.8 134 35.8
Aa31LG1G18120 Aethionema arabicum HOM05D009813 ORTHO05D011936 1.2e-08 66.2 392 29.1
CSS0030355 Camellia sinensis var. sinensis HOM05D017996 ORTHO05D017165 2.0e-08 65.5 156 33.3
Lalb_Chr19g0134401 Lupinus albus HOM05D012459 ORTHO05D010844 2.0e-08 65.5 265 27.2
ClCG01G004750 Citrullus lanatus HOM05D036858 ORTHO05D010844 5.8e-08 63.9 153 32.7
vmacro12771 Vaccinium macrocarpon HOM05D017996 ORTHO05D017165 5.8e-08 63.9 160 37.5
PGR102G2674 Punica granatum HOM05D012473 ORTHO05D010844 1.3e-07 62.8 736 26.2
TPR.G28364 Trifolium pratense HOM05D012459 ORTHO05D010844 6.5e-07 60.5 828 26.1
Glyma.16G211400 Glycine max HOM05D000005 ORTHO05D010844 8.4e-07 60.1 732 24.3
Sed0024256 Sechium edule HOM05D036858 ORTHO05D010844 8.4e-07 60.1 248 32.7
CARHR277640 Cardamine hirsuta HOM05D009813 ORTHO05D011936 1.9e-06 58.9 150 39.3
Lalb_Chr17g0336721 Lupinus albus HOM05D012459 ORTHO05D010844 2.5e-06 58.5 261 26.4
Actinidia06596 Actinidia chinensis HOM05D010873 ORTHO05D013124 3.2e-06 58.2 989 24.4
AL8G40940 Arabidopsis lyrata HOM05D009813 ORTHO05D011936 3.2e-06 58.2 183 36.1
arahy.Tifrunner.gnm1.ann1.UJV3YP Arachis hypogaea HOM05D012459 ORTHO05D010844 4.2e-06 57.8 509 26.1
Sc09g0002200 Simmondsia chinensis HOM05D030946 ORTHO05D010844 4.2e-06 57.8 159 37.1
AL8G40880 Arabidopsis lyrata HOM05D009813 ORTHO05D011936 7.1e-06 57.0 183 36.1


User provided reference genes

Program Settings