Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN23G1448 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.7e-238 828.9 430 100.0
FvH4_1g04650 Fragaria vesca HOM05D006732 ORTHO05D005682 1.8e-187 659.4 375 85.6
FAN19G1839 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.6e-181 639.0 380 83.4
FAN26G2548 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.5e-149 533.5 314 82.5
RcHm_v2.0_Chr2g0088891 Rosa chinensis HOM05D006732 ORTHO05D005682 8.3e-124 448.0 382 61.8
RcHm_v2.0_Chr7g0225411 Rosa chinensis HOM05D006732 ORTHO05D005682 1.8e-97 360.5 380 51.1
RcHm_v2.0_Chr2g0090631 Rosa chinensis HOM05D006732 ORTHO05D005682 1.5e-96 357.5 381 49.3
RcHm_v2.0_Chr2g0090681 Rosa chinensis HOM05D006732 ORTHO05D005682 1.1e-94 351.3 374 51.9
FAN23G0913 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.4e-93 346.3 392 48.2
FAN28G2932 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.4e-93 346.3 206 85.4
FAN19G0447 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.5e-93 345.9 385 48.6
FvH4_1g04981 Fragaria vesca HOM05D006732 ORTHO05D005682 1.1e-91 341.3 385 48.1
FAN23G1322 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.9e-91 340.5 385 48.1
FAN19G2793 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.5e-91 339.0 384 48.2
FAN08G0591 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.0e-89 333.2 381 49.1
FvH4_1g04892 Fragaria vesca HOM05D006732 ORTHO05D005682 3.9e-89 332.8 386 47.9
FvH4_5g09240 Fragaria vesca HOM05D006732 ORTHO05D005682 5.1e-89 332.4 381 49.1
FAN26G0144 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.7e-89 332.0 383 48.6
FvH4_1g04870 Fragaria vesca HOM05D006732 ORTHO05D005682 8.7e-89 331.6 381 47.5
FAN26G1852 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.9e-88 330.5 383 48.0
FAN18G2797 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.7e-88 328.9 384 49.0
FvH4_1g07310 Fragaria vesca HOM05D006732 ORTHO05D005682 2.1e-87 327.0 373 50.1
FvH4_1g07350 Fragaria vesca HOM05D006732 ORTHO05D005682 2.1e-87 327.0 373 50.1
FAN26G0545 Fragaria x ananassa HOM05D006732 ORTHO05D005682 8.2e-87 325.1 378 48.4
FAN26G0599 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.8e-86 323.9 378 48.4
FAN19G1623 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.0e-86 322.8 381 47.2
FvH4_1g04982 Fragaria vesca HOM05D006732 ORTHO05D005682 9.0e-86 321.6 394 46.7
FAN03G1911 Fragaria x ananassa HOM05D006732 ORTHO05D005682 8.7e-81 305.1 379 44.1
FAN23G1399 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.9e-77 292.4 357 45.7
FAN23G2814 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.9e-77 292.4 357 45.7
FAN13G2469 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.4e-73 281.2 361 44.3
FAN23G0775 Fragaria x ananassa HOM05D006732 ORTHO05D005682 9.7e-72 275.0 357 42.6
FvH4_1g05020 Fragaria vesca HOM05D006732 ORTHO05D005682 1.3e-71 274.6 358 45.0
FAN19G1442 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.8e-71 273.5 380 41.6
FvH4_1g04980 Fragaria vesca HOM05D006732 ORTHO05D005682 2.4e-70 270.4 342 48.2
FAN19G1364 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.2e-69 268.1 342 48.0
FAN19G0608 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.7e-68 264.2 328 44.5
FAN23G0359 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.5e-68 262.3 342 46.8
FAN28G0011 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.9e-66 255.4 378 39.2
FAN26G1230 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.8e-60 236.5 355 38.3
RcHm_v2.0_Chr4g0406891 Rosa chinensis HOM05D006732 ORTHO05D005682 2.1e-58 230.7 397 39.5
FAN19G0291 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.7e-56 222.6 187 65.8
FvH4_1g03120 Fragaria vesca HOM05D006732 ORTHO05D005682 6.3e-55 219.2 375 39.5
FAN19G1106 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.1e-54 218.4 405 37.5
FAN06G2841 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.5e-51 208.0 372 39.8
FAN06G4694 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.5e-51 208.0 372 39.8
FvH4_5g09163 Fragaria vesca HOM05D006732 ORTHO05D005682 5.5e-51 206.1 219 48.9
FvH4_1g03650 Fragaria vesca HOM05D006732 ORTHO05D005682 2.1e-50 204.1 403 36.0
FAN03G3183 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.6e-50 203.4 371 39.9
FvH4_7g04610 Fragaria vesca HOM05D006732 ORTHO05D005682 8.0e-50 202.2 372 39.0
FvH4_1g03870 Fragaria vesca HOM05D006732 ORTHO05D005682 2.4e-46 190.7 253 45.5
FAN01G2330 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.5e-45 186.4 370 37.8
FvH4_1g03800 Fragaria vesca HOM05D006732 ORTHO05D005682 2.2e-39 167.5 416 32.2
FAN14G2290 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.5e-35 154.8 334 34.7
FAN26G2691 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.1e-34 149.4 164 47.6
FvH4_1g04850 Fragaria vesca HOM05D006732 ORTHO05D005682 8.0e-34 149.1 183 43.2
FAN26G0550 Fragaria x ananassa HOM05D006732 ORTHO05D005682 8.0e-34 149.1 163 47.9
FAN10G1871 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.3e-33 147.5 290 38.6
RcHm_v2.0_Chr2g0090141 Rosa chinensis HOM05D006732 ORTHO05D005682 6.8e-33 146.0 156 46.8
FAN19G0514 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.3e-31 141.7 252 42.1
FvH4_1g03730 Fragaria vesca HOM05D006732 ORTHO05D005682 1.7e-31 141.4 256 34.8
FAN05G1364 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.7e-31 141.4 374 33.4
FvH4_6g38540 Fragaria vesca HOM05D006732 ORTHO05D005682 1.4e-30 138.3 388 30.4
FvH4_3g44180 Fragaria vesca HOM05D031336 ORTHO05D029596 2.4e-30 137.5 398 29.1
FAN11G3653 Fragaria x ananassa HOM05D031336 ORTHO05D029596 2.4e-30 137.5 398 29.1
RcHm_v2.0_Chr2g0089871 Rosa chinensis HOM05D006732 ORTHO05D005682 9.2e-30 135.6 131 48.9
FAN19G1213 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.0e-29 134.4 373 30.0
FAN23G0993 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.7e-29 134.0 145 46.9
FAN19G2470 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.8e-29 132.5 327 33.3
FAN26G3406 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.9e-28 130.6 187 37.4
FAN19G1133 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.1e-27 128.6 407 28.7
FAN26G1044 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.8e-25 121.3 249 33.7
FvH4_1g07301 Fragaria vesca HOM05D006732 ORTHO05D005682 3.1e-25 120.6 91 54.9
RcHm_v2.0_Chr5g0043771 Rosa chinensis HOM05D018501 ORTHO05D020617 4.0e-25 120.2 369 30.4
FAN08G2174 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.0e-24 117.9 115 47.0
FvH4_6g52510 Fragaria vesca HOM05D013417 ORTHO05D022618 5.8e-24 116.3 335 30.1
FAN14G4282 Fragaria x ananassa HOM05D013417 ORTHO05D022618 1.7e-23 114.8 333 30.6
FAN19G2109 Fragaria x ananassa HOM05D009798 ORTHO05D001056 2.4e-22 110.9 61 86.9
FAN03G2148 Fragaria x ananassa HOM05D018501 ORTHO05D020617 4.1e-22 110.2 333 28.2
FAN06G4869 Fragaria x ananassa HOM05D018501 ORTHO05D020617 1.2e-21 108.6 343 28.9
FAN03G1932 Fragaria x ananassa HOM05D018501 ORTHO05D020617 1.6e-21 108.2 328 28.0
FvH4_7g04500 Fragaria vesca HOM05D018501 ORTHO05D020617 3.5e-21 107.1 334 29.0
FvH4_2g38420 Fragaria vesca HOM05D013417 ORTHO05D022618 7.8e-21 105.9 322 30.4
FAN06G1563 Fragaria x ananassa HOM05D018501 ORTHO05D020617 1.7e-20 104.8 329 28.3
RcHm_v2.0_Chr1g0329851 Rosa chinensis HOM05D006732 ORTHO05D005682 1.7e-20 104.8 206 39.3
FAN28G1694 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.3e-19 100.1 161 36.0
FAN23G1684 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.6e-19 99.8 178 33.7
FAN12G2017 Fragaria x ananassa HOM05D013417 ORTHO05D022618 2.1e-18 97.8 314 28.3
FvH4_4g12220 Fragaria vesca HOM05D013417 ORTHO05D022618 2.8e-18 97.4 318 28.0
FAN19G1560 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.8e-18 97.4 171 42.1
FAN12G2010 Fragaria x ananassa HOM05D013417 ORTHO05D022618 4.7e-18 96.7 307 28.0
FAN05G0770 Fragaria x ananassa HOM05D008398 ORTHO05D005682 2.3e-17 94.4 320 30.9
FAN18G2036 Fragaria x ananassa HOM05D013417 ORTHO05D005682 4.0e-17 93.6 312 28.8
RcHm_v2.0_Chr5g0043731 Rosa chinensis HOM05D018501 ORTHO05D020617 5.2e-17 93.2 264 31.4
FAN23G1741 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.8e-17 92.8 177 31.6
FAN19G3146 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.4e-16 90.1 200 37.0
FAN19G1906 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.8e-16 89.7 137 35.0
RcHm_v2.0_Chr1g0376501 Rosa chinensis HOM05D008398 ORTHO05D005682 9.8e-16 89.0 278 29.5
FAN23G2570 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.9e-15 86.7 61 57.4
MD02G1004600 Malus domestica HOM05D006732 ORTHO05D005682 4.9e-15 86.7 359 28.1
FAN06G3286 Fragaria x ananassa HOM05D012901 ORTHO05D016303 8.3e-15 85.9 402 25.4
FvH4_7g31670 Fragaria vesca HOM05D010677 ORTHO05D012678 1.1e-14 85.5 347 26.5
FvH4_1g03530 Fragaria vesca HOM05D006732 ORTHO05D005682 1.4e-14 85.1 187 35.8
FvH4_7g04900 Fragaria vesca HOM05D012901 ORTHO05D016303 1.4e-14 85.1 371 26.4
FAN12G2497 Fragaria x ananassa HOM05D013417 ORTHO05D005682 1.4e-14 85.1 188 33.0
FvH4_7g06271 Fragaria vesca HOM05D012901 ORTHO05D016303 1.9e-14 84.7 407 25.6
FAN23G1506 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.9e-14 84.7 61 55.7
FAN12G0321 Fragaria x ananassa HOM05D013417 ORTHO05D005682 2.4e-14 84.3 188 33.0
FAN19G2055 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.2e-14 84.0 67 59.7
FAN28G1562 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.2e-14 84.0 58 56.9
FAN03G3389 Fragaria x ananassa HOM05D010677 ORTHO05D012678 2.1e-13 81.3 290 27.9
FvH4_5g09162 Fragaria vesca HOM05D006732 ORTHO05D005682 2.7e-13 80.9 82 57.3
Prupe.6G029800 Prunus persica HOM05D006732 ORTHO05D005682 6.0e-13 79.7 171 31.0
Prupe.7G110000 Prunus persica HOM05D006732 ORTHO05D005682 7.8e-13 79.3 226 30.1
RcHm_v2.0_Chr1g0380941 Rosa chinensis HOM05D006732 ORTHO05D005682 1.0e-12 79.0 359 27.0
FAN22G0443 Fragaria x ananassa HOM05D013417 ORTHO05D005682 1.7e-12 78.2 212 29.2
FvH4_1g04991 Fragaria vesca HOM05D006732 ORTHO05D005682 6.6e-12 76.3 142 42.3
FvH4_6g28610 Fragaria vesca HOM05D008398 ORTHO05D005682 1.1e-11 75.5 232 31.9
FAN14G5053 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.1e-11 75.5 232 32.3
FAN19G1354 Fragaria x ananassa HOM05D006732 ORTHO05D035266 5.6e-11 73.2 196 35.2
FAN12G0204 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.3e-11 72.8 104 33.7
Prupe.2G176100 Prunus persica HOM05D006732 ORTHO05D005682 9.5e-11 72.4 197 34.0
FAN23G1145 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.1e-10 71.2 65 53.8
FAN23G1373 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.0e-09 67.0 52 50.0
FAN09G2688 Fragaria x ananassa HOM05D008398 ORTHO05D005682 8.9e-09 65.9 217 30.9
FvH4_4g06202 Fragaria vesca HOM05D006732 ORTHO05D005682 5.8e-08 63.2 53 41.5
FvH4_1g04910 Fragaria vesca HOM05D006732 ORTHO05D046085 1.7e-07 61.6 52 48.1
FAN19G2861 Fragaria x ananassa HOM05D006732 ORTHO05D046085 3.7e-07 60.5 49 51.0
FAN25G1334 Fragaria x ananassa HOM05D031336 ORTHO05D029596 8.4e-07 59.3 72 44.4
QL02p078454 Quercus lobata HOM05D006732 ORTHO05D005682 4.1e-06 57.0 135 35.6
FvH4_1g04520 Fragaria vesca HOM05D006732 ORTHO05D005682 9.2e-06 55.8 85 38.8


User provided reference genes

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