Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN23G1308 Fragaria x ananassa HOM05D003969 ORTHO05D003125 1.5e-95 352.8 172 100.0
FAN19G0689 Fragaria x ananassa HOM05D003969 ORTHO05D003125 7.0e-90 334.0 172 94.2
FAN28G0460 Fragaria x ananassa HOM05D003969 ORTHO05D003125 2.7e-89 332.0 172 94.8
FAN26G0199 Fragaria x ananassa HOM05D003969 ORTHO05D003125 3.2e-82 308.5 154 95.5
RcHm_v2.0_Chr2g0086701 Rosa chinensis HOM05D003969 ORTHO05D003125 1.1e-63 246.9 179 76.0
Prupe.7G255000 Prunus persica HOM05D003969 ORTHO05D003125 1.8e-32 143.3 179 51.4
Nn8g39714 Nelumbo nucifera HOM05D003969 ORTHO05D003125 3.2e-18 95.9 163 42.3
Nn2g12243 Nelumbo nucifera HOM05D003969 ORTHO05D003125 2.7e-17 92.8 164 40.9
Cpa.g.sc46.86 Carica papaya HOM05D003969 ORTHO05D003125 1.8e-16 90.1 174 39.7
THA.LOC104815394 Tarenaya hassleriana HOM05D003969 ORTHO05D003125 1.1e-15 87.4 177 38.4
TAR625G0404 Trochodendron aralioides HOM05D003969 ORTHO05D003125 2.0e-15 86.7 164 37.8
ClCG02G017250 Citrullus lanatus HOM05D003969 ORTHO05D003125 3.3e-15 85.9 167 40.1
PSO675G3576 Papaver somniferum HOM05D003969 ORTHO05D003125 4.4e-15 85.5 143 37.8
Carub.0007s3088 Capsella rubella HOM05D003969 ORTHO05D003125 7.4e-15 84.7 157 39.5
AL7G43940 Arabidopsis lyrata HOM05D003969 ORTHO05D003125 1.7e-14 83.6 158 38.6
Cc06_g07430 Coffea canephora HOM05D003969 ORTHO05D003125 1.7e-14 83.6 166 41.0
CiPaw.15G182600 Carya illinoinensis HOM05D003969 ORTHO05D003125 2.2e-14 83.2 164 38.4
AT5G35090 Arabidopsis thaliana HOM05D003969 ORTHO05D003125 2.8e-14 82.8 150 38.7
CARHR217160 Cardamine hirsuta HOM05D003969 ORTHO05D003125 3.7e-14 82.4 162 39.5
TAR636G2249 Trochodendron aralioides HOM05D003969 ORTHO05D003125 8.2e-14 81.3 164 37.8
TAR626G0029 Trochodendron aralioides HOM05D003969 ORTHO05D003125 1.1e-13 80.9 158 38.6
TWI34G1911 Tripterygium wilfordii HOM05D003969 ORTHO05D003125 1.8e-13 80.1 152 40.1
CiPaw.15G182500 Carya illinoinensis HOM05D003969 ORTHO05D003125 2.4e-13 79.7 164 36.6
PSO732G0403 Papaver somniferum HOM05D003969 ORTHO05D003125 2.4e-13 79.7 148 36.5
Dinv41425 Davidia involucrata HOM05D003969 ORTHO05D003125 4.1e-13 79.0 149 37.6
SalBow1G8303 Salvia bowleyana HOM05D003969 ORTHO05D003125 4.1e-13 79.0 155 38.1
THA.LOC104808923 Tarenaya hassleriana HOM05D003969 ORTHO05D003125 9.1e-13 77.8 173 38.2
BcaB04g18063 Brassica carinata HOM05D003969 ORTHO05D003125 1.2e-12 77.4 147 35.4
CANSAT11G0887 Cannabis sativa HOM05D003969 ORTHO05D003125 2.6e-12 76.3 143 37.8
Psat4g033280 Pisum sativum HOM05D003969 ORTHO05D003125 3.4e-12 75.9 155 38.1
Thhalv10005689m.g Eutrema salsugineum HOM05D003969 ORTHO05D003125 5.9e-12 75.1 152 34.9
Peaxi162Scf00116g00085 Petunia axillaris HOM05D003969 ORTHO05D003125 5.9e-12 75.1 125 39.2
TAR383G0074 Trochodendron aralioides HOM05D003969 ORTHO05D003125 7.7e-12 74.7 90 53.3
Dinv15887 Davidia involucrata HOM05D003969 ORTHO05D003125 1.3e-11 73.9 86 51.2
COL.COLO4_24105 Corchorus olitorius HOM05D003969 ORTHO05D003125 1.7e-11 73.6 105 44.8
MBI14_g03633_MAGBIO Magnolia biondii HOM05D003969 ORTHO05D003125 1.7e-11 73.6 141 36.9
MELO3C004442.2 Cucumis melo HOM05D003969 ORTHO05D003125 2.2e-11 73.2 167 37.1
Sp7g07270 Schrenkiella parvula HOM05D003969 ORTHO05D003125 2.2e-11 73.2 146 35.6
Aa31sc598G40 Aethionema arabicum HOM05D003969 ORTHO05D003125 2.9e-11 72.8 143 36.4
Hma1.2p1_0182F.1_g080470 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 2.9e-11 72.8 151 35.8
Hma1.2p1_2744F.1_g327795 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 2.9e-11 72.8 151 35.8
TPR.G15776 Trifolium pratense HOM05D003969 ORTHO05D003125 3.8e-11 72.4 165 37.0
Migut.K00379 Erythranthe guttata HOM05D003969 ORTHO05D003125 6.5e-11 71.6 150 36.7
Medtr4g116500 Medicago truncatula HOM05D003969 ORTHO05D003125 8.5e-11 71.2 161 38.5
Ca_21615_v3 Cicer arietinum L. HOM05D003969 ORTHO05D003125 1.1e-10 70.9 164 35.4
Duzib168G2018 Durio zibethinus HOM05D003969 ORTHO05D003125 1.4e-10 70.5 177 34.5
Medtr1g012950 Medicago truncatula HOM05D013068 ORTHO05D003125 1.4e-10 70.5 145 34.5
Dinv11721 Davidia involucrata HOM05D003969 ORTHO05D003125 1.9e-10 70.1 89 44.9
Peaxi162Scf00391g00017 Petunia axillaris HOM05D003969 ORTHO05D003125 1.9e-10 70.1 146 37.7
Sed0021780 Sechium edule HOM05D003969 ORTHO05D003125 1.9e-10 70.1 167 37.1
PGSC0003DMG400005307 Solanum tuberosum HOM05D003969 ORTHO05D003125 1.9e-10 70.1 90 46.7
Actinidia21911 Actinidia chinensis HOM05D003969 ORTHO05D003125 2.5e-10 69.7 74 52.7
Lsat_1_v5_gn_8_63081 Lactuca sativa HOM05D003969 ORTHO05D003125 2.5e-10 69.7 147 32.7
Lalb_Chr12g0198511 Lupinus albus HOM05D003969 ORTHO05D003125 2.5e-10 69.7 168 36.3
MSTRG.10635 Avicennia marina HOM05D003969 ORTHO05D003125 4.2e-10 68.9 141 36.2
ClCG05G016610 Citrullus lanatus HOM05D003969 ORTHO05D003125 5.5e-10 68.6 82 43.9
Hma1.2p1_1784F.1_g302146 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 5.5e-10 68.6 150 36.0
Hma1.2p1_1784F.1_g302150 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 5.5e-10 68.6 150 36.0
Rhsim03G0254600 Rhododendron simsii HOM05D000320 ORTHO05D000532 5.5e-10 68.6 159 36.5
PGSC0003DMG400029901 Solanum tuberosum HOM05D003969 ORTHO05D003125 7.2e-10 68.2 103 45.6
Lj4g0023658 Lotus japonicus HOM05D003969 ORTHO05D003125 2.1e-09 66.6 158 34.2
Phvul.003G174600 Phaseolus vulgaris HOM05D003969 ORTHO05D003125 2.1e-09 66.6 149 33.6
Solyc01g011390.2 Solanum lycopersicum HOM05D003969 ORTHO05D003125 2.1e-09 66.6 115 40.0
AUR62011257 Chenopodium quinoa HOM05D003969 ORTHO05D003125 2.7e-09 66.2 167 37.1
AUR62041449 Chenopodium quinoa HOM05D003969 ORTHO05D003125 2.7e-09 66.2 148 37.2
Nitab4.5_0000069g0040 Nicotiana tabacum HOM05D003969 ORTHO05D003125 2.7e-09 66.2 117 41.9
Nitab4.5_0010572g0020 Nicotiana tabacum HOM05D003969 ORTHO05D003125 2.7e-09 66.2 102 43.1
Nitab4.5_0002992g0060 Nicotiana tabacum HOM05D003969 ORTHO05D003125 3.6e-09 65.9 104 41.3
TPR.G38870 Trifolium pratense HOM05D013068 ORTHO05D003125 3.6e-09 65.9 168 33.3
Lj5g0018030 Lotus japonicus HOM05D013068 ORTHO05D003125 6.1e-09 65.1 152 36.8
Haze_19321 Corylus avellana HOM05D003969 ORTHO05D003125 8.0e-09 64.7 103 45.6
Rhsim01G0050000 Rhododendron simsii HOM05D016725 ORTHO05D003125 8.0e-09 64.7 82 47.6
Rhsim02G0205800 Rhododendron simsii HOM05D003969 ORTHO05D003125 8.0e-09 64.7 123 40.7
Sc08g0005750 Simmondsia chinensis HOM05D003969 ORTHO05D003125 1.0e-08 64.3 109 43.1
Migut.A00008 Erythranthe guttata HOM05D003969 ORTHO05D003125 1.4e-08 63.9 85 44.7
Hma1.2p1_0228F.1_g096590 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 1.4e-08 63.9 75 49.3
Lalb_Chr13g0301201 Lupinus albus HOM05D003969 ORTHO05D003125 1.4e-08 63.9 152 34.2
VMungo1215G0564 Vigna mungo HOM05D003969 ORTHO05D003125 1.4e-08 63.9 149 36.9
Rhsim01G0050100 Rhododendron simsii HOM05D016725 ORTHO05D003125 1.8e-08 63.5 82 47.6
MSTRG.10639 Avicennia marina HOM05D003969 ORTHO05D003125 2.3e-08 63.2 137 34.3
BcaC07g37678 Brassica carinata HOM05D003969 ORTHO05D003125 2.3e-08 63.2 148 31.1
BolC8t48050H Brassica oleracea HOM05D003969 ORTHO05D003125 2.3e-08 63.2 148 31.1
PGSC0003DMG400030696 Solanum tuberosum HOM05D003969 ORTHO05D003125 3.0e-08 62.8 150 32.7
CSS0007982 Camellia sinensis var. sinensis HOM05D003969 ORTHO05D003125 3.9e-08 62.4 126 38.9
Gohir.A13G203200 Gossypium hirsutum HOM05D003969 ORTHO05D003125 3.9e-08 62.4 150 36.7
Gorai.013G237600 Gossypium raimondii HOM05D003969 ORTHO05D003125 3.9e-08 62.4 150 36.7
Solyc08g041810.1 Solanum lycopersicum HOM05D003969 ORTHO05D003125 5.2e-08 62.0 98 42.9
Sopen08g011970 Solanum pennellii HOM05D003969 ORTHO05D003125 5.2e-08 62.0 75 48.0
Actinidia04245 Actinidia chinensis HOM05D003969 ORTHO05D003125 6.7e-08 61.6 157 34.4
SGA_v2.0_scaffold500G52494 Striga asiatica HOM05D003969 ORTHO05D003125 6.7e-08 61.6 137 35.8
EL10Ac8g18819 Beta vulgaris HOM05D003969 ORTHO05D003125 8.8e-08 61.2 160 31.2
Gohir.D13G208500 Gossypium hirsutum HOM05D003969 ORTHO05D003125 8.8e-08 61.2 150 36.7
CSS0019227 Camellia sinensis var. sinensis HOM05D003969 ORTHO05D003125 1.1e-07 60.8 147 35.4
CSS0049905 Camellia sinensis var. sinensis HOM05D003969 ORTHO05D003125 1.1e-07 60.8 147 35.4
Sc23g0006570 Simmondsia chinensis HOM05D003969 ORTHO05D003125 1.1e-07 60.8 98 37.8
Solyc07g007150.1 Solanum lycopersicum HOM05D003969 ORTHO05D003125 1.1e-07 60.8 149 30.9
Sopen01g007400 Solanum pennellii HOM05D003969 ORTHO05D003125 1.5e-07 60.5 111 38.7
Glyma.13G157500 Glycine max HOM05D003969 ORTHO05D003125 2.0e-07 60.1 162 35.8
Manes.03G012100 Manihot esculenta HOM05D003969 ORTHO05D003125 2.0e-07 60.1 64 51.6
Lalb_Chr22g0361461 Lupinus albus HOM05D013068 ORTHO05D003125 2.6e-07 59.7 167 31.1
Peaxi162Scf00315g00011 Petunia axillaris HOM05D003969 ORTHO05D003125 2.6e-07 59.7 81 44.4
Sed0009487 Sechium edule HOM05D003969 ORTHO05D003125 2.6e-07 59.7 59 45.8
Sopen07g003200 Solanum pennellii HOM05D003969 ORTHO05D003125 2.6e-07 59.7 147 30.6
ECA236G4020 Erigeron canadensis HOM05D003969 ORTHO05D003125 4.4e-07 58.9 79 46.8
Manes.16G125900 Manihot esculenta HOM05D008824 ORTHO05D003125 4.4e-07 58.9 64 54.7
Oeu010893.1 Olea europaea HOM05D003969 ORTHO05D003125 4.4e-07 58.9 120 36.7
Phvul.001G047400 Phaseolus vulgaris HOM05D013068 ORTHO05D003125 4.4e-07 58.9 150 33.3
Rhsim01G0052800 Rhododendron simsii HOM05D016725 ORTHO05D003125 4.4e-07 58.9 75 49.3
HPP92_023807 Vanilla planifolia HOM05D003969 ORTHO05D003125 4.4e-07 58.9 66 45.5
A08p09570 Brassica napus HOM05D003969 ORTHO05D003125 5.7e-07 58.5 75 42.7
BraA08t32954Z Brassica rapa HOM05D003969 ORTHO05D003125 5.7e-07 58.5 75 42.7
HanXRQChr05g0141561 Helianthus annuus HOM05D003969 ORTHO05D003125 5.7e-07 58.5 84 41.7
Thecc.09G141500 Theobroma cacao HOM05D003969 ORTHO05D003125 5.7e-07 58.5 179 32.4
Sc23g0006560 Simmondsia chinensis HOM05D003969 ORTHO05D003125 7.4e-07 58.2 76 40.8
HPP92_006060 Vanilla planifolia HOM05D003969 ORTHO05D003125 7.4e-07 58.2 153 32.0
Ah.10g035700 Amaranthus hybridus HOM05D003969 ORTHO05D003125 9.7e-07 57.8 69 47.8
CAN.G551.21 Capsicum annuum HOM05D003969 ORTHO05D003125 9.7e-07 57.8 76 43.4
CiPaw.07G226900 Carya illinoinensis HOM05D003969 ORTHO05D003125 9.7e-07 57.8 124 37.9
CDE02G0310 Ceratophyllum demersum HOM05D003969 ORTHO05D003125 9.7e-07 57.8 66 45.5
Duzib150G0809 Durio zibethinus HOM05D003969 ORTHO05D003125 9.7e-07 57.8 182 33.5
Glyma.17G105200 Glycine max HOM05D003969 ORTHO05D003125 1.3e-06 57.4 84 46.4
QL02p091243 Quercus lobata HOM05D003969 ORTHO05D003125 1.3e-06 57.4 168 32.7
Thecc.09G019700 Theobroma cacao HOM05D003969 ORTHO05D003125 1.3e-06 57.4 104 42.3
VMungo0647G1373 Vigna mungo HOM05D013068 ORTHO05D003125 1.3e-06 57.4 143 34.3
Potri.006G259200 Populus trichocarpa HOM05D008824 ORTHO05D003125 1.7e-06 57.0 166 32.5
Solyc12g010430.1 Solanum lycopersicum HOM05D003969 ORTHO05D003125 1.7e-06 57.0 164 30.5
HPP92_005341 Vanilla planifolia HOM05D003969 ORTHO05D003125 1.7e-06 57.0 148 30.4
COL.COLO4_18912 Corchorus olitorius HOM05D003969 ORTHO05D003125 2.8e-06 56.2 110 37.3
ATR0763G001 Amborella trichopoda HOM05D003969 ORTHO05D003125 3.7e-06 55.8 87 40.2
Sopen12g005450 Solanum pennellii HOM05D003969 ORTHO05D003125 3.7e-06 55.8 164 29.9
Aqoxy7G03536 Aquilegia oxysepala HOM05D003969 ORTHO05D003125 4.8e-06 55.5 135 34.1
ClCG08G013530 Citrullus lanatus HOM05D008824 ORTHO05D003125 4.8e-06 55.5 138 37.7
MELO3C016989.2 Cucumis melo HOM05D003969 ORTHO05D003125 4.8e-06 55.5 67 44.8
Atru.chr7.265 Acer truncatum HOM05D003969 ORTHO05D003125 6.3e-06 55.1 56 53.6
Actinidia23308 Actinidia chinensis HOM05D003969 ORTHO05D003125 6.3e-06 55.1 86 41.9
AUR62031569 Chenopodium quinoa HOM05D003969 ORTHO05D003125 6.3e-06 55.1 97 36.1
Cc08_g00220 Coffea canephora HOM05D003969 ORTHO05D003125 6.3e-06 55.1 111 41.4
PSO384G4887 Papaver somniferum HOM05D000107 ORTHO05D000062 6.3e-06 55.1 54 53.7
Atru.chr7.2498 Acer truncatum HOM05D003969 ORTHO05D003125 8.2e-06 54.7 168 31.5
Ah.16g104800 Amaranthus hybridus HOM05D003969 ORTHO05D003125 8.2e-06 54.7 68 47.1
Eucgr.L03259 Eucalyptus grandis HOM05D003969 ORTHO05D003125 8.2e-06 54.7 86 39.5


User provided reference genes

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