Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN23G1008 Fragaria x ananassa HOM05D015912 ORTHO05D045714 5.8e-103 377.5 180 100.0
FvH4_1g21620 Fragaria vesca HOM05D015912 ORTHO05D045714 9.3e-101 370.2 180 97.2
FvH4_1g21610 Fragaria vesca HOM05D015912 ORTHO05D029635 7.4e-50 201.1 181 54.1
FAN19G0607 Fragaria x ananassa HOM05D015912 ORTHO05D029635 2.2e-49 199.5 181 53.6
FAN23G2675 Fragaria x ananassa HOM05D015912 ORTHO05D029635 3.1e-48 195.7 181 53.0
FAN19G1551 Fragaria x ananassa HOM05D015912 ORTHO05D002052 7.7e-31 137.9 67 97.0
FAN23G2755 Fragaria x ananassa HOM05D015912 ORTHO05D206108 2.9e-30 136.0 77 85.7
MD12G1038800 Malus domestica HOM05D002687 ORTHO05D002052 5.9e-23 111.7 167 41.3
Cfa016686 Carpinus fangiana HOM05D002687 ORTHO05D002052 4.3e-21 105.5 167 40.1
Manes.09G046600 Manihot esculenta HOM05D002687 ORTHO05D002052 7.3e-21 104.8 162 38.3
Prupe.7G097000 Prunus persica HOM05D002687 ORTHO05D002052 6.1e-20 101.7 164 39.6
RcHm_v2.0_Chr3g0475711 Rosa chinensis HOM05D002687 ORTHO05D002052 1.2e-18 97.4 165 35.2
FvH4_6g17371 Fragaria vesca HOM05D025439 ORTHO05D022631 1.5e-18 97.1 168 32.7
FAN05G0235 Fragaria x ananassa HOM05D025439 ORTHO05D022631 4.4e-18 95.5 165 32.1
Prupe.8G108100 Prunus persica HOM05D041935 ORTHO05D022631 4.4e-18 95.5 167 35.9
TAR623G0011 Trochodendron aralioides HOM05D002687 ORTHO05D002052 9.8e-18 94.4 166 32.5
CiPaw.10G094600 Carya illinoinensis HOM05D002687 ORTHO05D002052 3.7e-17 92.4 161 35.4
MBI01_g04539_MAGBIO Magnolia biondii HOM05D002687 ORTHO05D002052 3.7e-17 92.4 165 32.7
MD14G1037500 Malus domestica HOM05D002687 ORTHO05D002052 8.3e-17 91.3 165 36.4
FvH4_6g20177 Fragaria vesca HOM05D002687 ORTHO05D002052 1.4e-16 90.5 163 34.4
FAN14G3199 Fragaria x ananassa HOM05D029328 ORTHO05D002052 1.4e-16 90.5 163 34.4
QL07p036935 Quercus lobata HOM05D002687 ORTHO05D002052 2.4e-16 89.7 164 35.4
CiPaw.09G020300 Carya illinoinensis HOM05D002687 ORTHO05D002052 4.1e-16 89.0 162 35.2
AUR62031792 Chenopodium quinoa HOM05D002687 ORTHO05D002052 1.6e-15 87.0 162 34.0
AUR62023990 Chenopodium quinoa HOM05D002687 ORTHO05D002052 5.9e-15 85.1 165 32.1
FAN10G3605 Fragaria x ananassa HOM05D020649 ORTHO05D002052 7.8e-15 84.7 147 36.7
FvH4_7g02250 Fragaria vesca HOM05D020649 ORTHO05D046499 2.3e-14 83.2 149 37.6
Prupe.1G193600 Prunus persica HOM05D028866 ORTHO05D334605 3.9e-14 82.4 132 40.2
FAN06G4035 Fragaria x ananassa HOM05D020649 ORTHO05D046499 1.1e-13 80.9 149 36.9
EL10Ac7g16313 Beta vulgaris HOM05D002687 ORTHO05D002052 1.5e-13 80.5 162 30.9
Prupe.1G192400 Prunus persica HOM05D028866 ORTHO05D336417 1.9e-13 80.1 134 38.8
AUR62001543 Chenopodium quinoa HOM05D002687 ORTHO05D002052 2.5e-13 79.7 162 30.2
Prupe.1G194000 Prunus persica HOM05D028866 ORTHO05D335152 3.3e-13 79.3 138 38.4
Prupe.1G192300 Prunus persica HOM05D028866 ORTHO05D335567 4.7e-12 75.5 134 37.3
Rhsim13G0195600 Rhododendron simsii HOM05D002687 ORTHO05D002052 6.2e-12 75.1 160 29.4
Manes.11G165500 Manihot esculenta HOM05D002687 ORTHO05D002052 1.4e-11 73.9 162 30.9
ATR0772G197 Amborella trichopoda HOM05D002687 ORTHO05D002052 1.8e-11 73.6 165 27.9
SGA_v2.0_scaffold295G47489 Striga asiatica HOM05D002687 ORTHO05D002052 2.3e-11 73.2 165 28.5
CiPaw.04G111600 Carya illinoinensis HOM05D002687 ORTHO05D002052 3.1e-11 72.8 161 32.3
Ah.15g100060 Amaranthus hybridus HOM05D002687 ORTHO05D002052 1.5e-10 70.5 163 30.1
Dinv08137 Davidia involucrata HOM05D002687 ORTHO05D002052 2.6e-10 69.7 162 27.2
Ca_09050_v3 Cicer arietinum L. HOM05D002687 ORTHO05D002052 3.4e-10 69.3 154 31.2
Oeu048843.1 Olea europaea HOM05D002687 ORTHO05D002052 4.4e-10 68.9 165 26.1
Oeu035584.1 Olea europaea HOM05D002687 ORTHO05D002052 7.5e-10 68.2 165 24.8
Migut.N02460 Erythranthe guttata HOM05D002687 ORTHO05D002052 1.3e-09 67.4 165 25.5
SGA_v2.0_scaffold637G53306 Striga asiatica HOM05D002687 ORTHO05D002052 2.2e-09 66.6 165 26.1
FAN14G0583 Fragaria x ananassa HOM05D041935 ORTHO05D045610 2.9e-09 66.2 164 32.9
SalBow3G2018 Salvia bowleyana HOM05D002687 ORTHO05D002052 2.9e-09 66.2 166 25.9
unitig_27.g25123 Utricularia gibba HOM05D000738 ORTHO05D000675 2.9e-09 66.2 165 24.8
Cc01_g08570 Coffea canephora HOM05D002687 ORTHO05D002052 3.7e-09 65.9 163 24.5
FAN24G3102 Fragaria x ananassa HOM05D031442 ORTHO05D046342 3.7e-09 65.9 161 31.1
RcHm_v2.0_Chr3g0471581 Rosa chinensis HOM05D025439 ORTHO05D022631 6.4e-09 65.1 177 29.4
TWI79G0900 Tripterygium wilfordii HOM05D002687 ORTHO05D002052 6.4e-09 65.1 167 26.3
CSS0036580 Camellia sinensis var. sinensis HOM05D002687 ORTHO05D002052 8.3e-09 64.7 142 34.5
FAN05G4185 Fragaria x ananassa HOM05D000747 ORTHO05D007656 8.3e-09 64.7 74 40.5
SGA_v2.0_scaffold100G29631 Striga asiatica HOM05D002687 ORTHO05D002052 8.3e-09 64.7 165 30.3
FAN03G2851 Fragaria x ananassa HOM05D020649 ORTHO05D002052 2.4e-08 63.2 132 34.1
Manes.08G032700 Manihot esculenta HOM05D008136 ORTHO05D002052 2.4e-08 63.2 162 27.2
Sc21g0006860 Simmondsia chinensis HOM05D002687 ORTHO05D002052 2.4e-08 63.2 163 28.2
Hma1.2p1_0097F.1_g048090 Hydrangea macrophylla HOM05D002687 ORTHO05D002052 3.2e-08 62.8 140 28.6
MD05G1160100 Malus domestica HOM05D015912 ORTHO05D247738 4.1e-08 62.4 153 28.1
Dinv17088 Davidia involucrata HOM05D002687 ORTHO05D002052 7.0e-08 61.6 171 25.7
FvH4_6g15981 Fragaria vesca HOM05D041935 ORTHO05D045610 9.2e-08 61.2 166 28.9
Dinv31751 Davidia involucrata HOM05D002687 ORTHO05D002052 2.7e-07 59.7 145 26.9
unitig_8.g3658 Utricularia gibba HOM05D002687 ORTHO05D002052 2.7e-07 59.7 165 26.1
DCAR_013440 Daucus carota HOM05D002687 ORTHO05D002052 3.5e-07 59.3 166 29.5
unitig_22.g6649 Utricularia gibba HOM05D000733 ORTHO05D000649 4.6e-07 58.9 138 27.5
COL.COLO4_22662 Corchorus olitorius HOM05D002687 ORTHO05D002052 1.0e-06 57.8 167 28.1
FvH4_3g26690 Fragaria vesca HOM05D002687 ORTHO05D002052 2.3e-06 56.6 163 27.6
FAN11G1248 Fragaria x ananassa HOM05D002687 ORTHO05D002052 2.3e-06 56.6 163 27.6
Medtr5g093120 Medicago truncatula HOM05D013293 ORTHO05D015165 2.3e-06 56.6 163 26.4
Psat7g254840 Pisum sativum HOM05D014482 ORTHO05D019002 2.3e-06 56.6 146 28.1
TAR633G0472 Trochodendron aralioides HOM05D002687 ORTHO05D002052 2.3e-06 56.6 140 27.9
CiPaw.14G096100 Carya illinoinensis HOM05D002687 ORTHO05D002052 8.6e-06 54.7 149 26.2
PGSC0003DMG400000476 Solanum tuberosum HOM05D000733 ORTHO05D000649 8.6e-06 54.7 95 29.5


User provided reference genes

Program Settings