Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN23G0937 Fragaria x ananassa HOM05D007151 ORTHO05D009056 1.9e-264 915.2 443 100.0
FAN26G2518 Fragaria x ananassa HOM05D007151 ORTHO05D009056 1.2e-229 799.7 449 89.1
FvH4_1g01491 Fragaria vesca HOM05D007151 ORTHO05D009056 1.9e-227 792.3 443 89.2
RcHm_v2.0_Chr2g0086401 Rosa chinensis HOM05D007151 ORTHO05D009056 9.9e-213 743.4 446 83.6
Prupe.7G252600 Prunus persica HOM05D007151 ORTHO05D009056 2.4e-182 642.5 448 71.9
MD02G1011800 Malus domestica HOM05D007151 ORTHO05D009056 2.6e-181 639.0 447 71.8
QL02p091761 Quercus lobata HOM05D007151 ORTHO05D009056 3.4e-173 612.1 438 68.5
Cfa020867 Carpinus fangiana HOM05D007151 ORTHO05D009056 1.4e-166 590.1 416 69.7
CANSAT11G1483 Cannabis sativa HOM05D007151 ORTHO05D009056 2.4e-166 589.3 456 64.0
CiPaw.15G171100 Carya illinoinensis HOM05D007151 ORTHO05D009056 1.3e-164 583.6 416 68.5
TWI34G1895 Tripterygium wilfordii HOM05D007151 ORTHO05D009056 6.1e-162 574.7 452 64.8
Manes.06G039800 Manihot esculenta HOM05D007151 ORTHO05D009056 3.9e-161 572.0 452 64.2
Haze_19293 Corylus avellana HOM05D007151 ORTHO05D009056 6.7e-161 571.2 416 68.8
Sabra18G0095800 Salix brachista HOM05D007151 ORTHO05D009056 8.8e-161 570.9 436 66.7
Potri.018G112600 Populus trichocarpa HOM05D007151 ORTHO05D009056 1.5e-160 570.1 436 66.1
GSVIVG01001047001 Vitis vinifera HOM05D007151 ORTHO05D009056 9.7e-160 567.4 443 64.8
Duzib168G1221 Durio zibethinus HOM05D007151 ORTHO05D009056 5.3e-158 561.6 447 64.7
Gohir.A13G185600 Gossypium hirsutum HOM05D007151 ORTHO05D009056 5.0e-156 555.1 445 63.1
Cpa.g.sc46.106 Carica papaya HOM05D007151 ORTHO05D009056 8.5e-156 554.3 423 64.1
CsaV3_1G028600 Cucumis sativus L. HOM05D007151 ORTHO05D009056 8.5e-156 554.3 442 62.4
Sed0008117 Sechium edule HOM05D007151 ORTHO05D009056 1.5e-155 553.5 419 64.4
Gohir.D13G192100 Gossypium hirsutum HOM05D007151 ORTHO05D009056 1.9e-155 553.1 445 62.9
COL.COLO4_18747 Corchorus olitorius HOM05D007151 ORTHO05D009056 3.2e-155 552.4 452 62.6
Thecc.09G036700 Theobroma cacao HOM05D007151 ORTHO05D009056 4.2e-155 552.0 440 63.4
Actinidia04263 Actinidia chinensis HOM05D007151 ORTHO05D009056 7.2e-155 551.2 459 60.6
vmacro21874 Vaccinium macrocarpon HOM05D007151 ORTHO05D009056 9.4e-155 550.8 448 61.2
TAR626G0740 Trochodendron aralioides HOM05D007151 ORTHO05D009056 1.6e-154 550.1 427 62.5
Lj6g0019652 Lotus japonicus HOM05D007151 ORTHO05D009056 2.1e-154 549.7 449 62.1
CSS0031191 Camellia sinensis var. sinensis HOM05D007151 ORTHO05D009056 2.7e-154 549.3 425 63.5
Gorai.013G218000 Gossypium raimondii HOM05D007151 ORTHO05D009056 2.7e-154 549.3 445 62.7
Atru.chr7.189 Acer truncatum HOM05D007151 ORTHO05D009056 1.4e-153 547.0 444 61.5
Actinidia04269 Actinidia chinensis HOM05D007151 ORTHO05D009056 1.8e-153 546.6 459 60.1
Ciclev10008285m.g Citrus clementina HOM05D007151 ORTHO05D009056 1.2e-152 543.9 443 62.1
ClCG06G012110 Citrullus lanatus HOM05D007151 ORTHO05D009056 1.5e-152 543.5 440 63.0
Nitab4.5_0000416g0100 Nicotiana tabacum HOM05D007151 ORTHO05D009056 1.5e-152 543.5 447 62.0
Peaxi162Scf00347g00330 Petunia axillaris HOM05D007151 ORTHO05D009056 7.0e-150 534.6 447 61.3
Nitab4.5_0010178g0030 Nicotiana tabacum HOM05D007151 ORTHO05D009056 1.2e-149 533.9 450 61.8
FvH4_5g35120 Fragaria vesca HOM05D007151 ORTHO05D009056 5.9e-149 531.6 314 83.1
Glyma.15G208200 Glycine max HOM05D007151 ORTHO05D009056 1.0e-148 530.8 448 60.0
Eucgr.C00404 Eucalyptus grandis HOM05D007151 ORTHO05D009056 9.4e-147 524.2 424 61.1
Aqoxy7G03505 Aquilegia oxysepala HOM05D007151 ORTHO05D009056 2.3e-145 519.6 443 58.5
PGSC0003DMG400011834 Solanum tuberosum HOM05D007151 ORTHO05D009056 6.8e-145 518.1 455 59.1
Nn8g39757 Nelumbo nucifera HOM05D007151 ORTHO05D009056 1.5e-144 516.9 454 59.9
Thhalv10025257m.g Eutrema salsugineum HOM05D007151 ORTHO05D009056 7.5e-144 514.6 455 58.7
Medtr2g449830 Medicago truncatula HOM05D007151 ORTHO05D009056 1.3e-143 513.8 414 60.1
MELO3C010253.2 Cucumis melo HOM05D007151 ORTHO05D009056 2.8e-143 512.7 446 58.7
CAN.G520.35 Capsicum annuum HOM05D007151 ORTHO05D009056 6.3e-143 511.5 429 61.3
Solyc07g005240.4 Solanum lycopersicum HOM05D007151 ORTHO05D009056 8.3e-143 511.1 444 59.7
Psat1g022920 Pisum sativum HOM05D007151 ORTHO05D009056 2.4e-142 509.6 452 58.0
PGR142G3459 Punica granatum HOM05D007151 ORTHO05D009056 2.4e-142 509.6 425 58.6
Lj9A711T48 Lonicera japonica HOM05D007151 ORTHO05D009056 9.1e-142 507.7 447 58.4
HanXRQChr10g0314511 Helianthus annuus HOM05D007151 ORTHO05D009056 1.2e-141 507.3 414 59.9
AT2G22650 Arabidopsis thaliana HOM05D007151 ORTHO05D009056 3.5e-141 505.8 436 58.5
TPR.G31930 Trifolium pratense HOM05D007151 ORTHO05D009056 4.5e-141 505.4 464 56.2
A03p51030 Brassica napus HOM05D007151 ORTHO05D009056 1.0e-140 504.2 426 58.0
PSO063G2965 Papaver somniferum HOM05D007151 ORTHO05D009056 1.3e-140 503.8 449 57.7
ECA234G3390 Erigeron canadensis HOM05D000399 ORTHO05D000304 1.7e-140 503.4 443 57.8
C07p49460 Brassica napus HOM05D007151 ORTHO05D009056 2.3e-140 503.1 438 57.3
BraA03t14189Z Brassica rapa HOM05D007151 ORTHO05D009056 2.9e-140 502.7 438 57.5
Dinv41414 Davidia involucrata HOM05D007151 ORTHO05D009056 2.9e-140 502.7 393 62.8
VMungo1309G1509 Vigna mungo HOM05D007151 ORTHO05D009056 5.0e-140 501.9 461 56.8
AL3G44210 Arabidopsis lyrata HOM05D007151 ORTHO05D009056 8.6e-140 501.1 445 58.4
Lsat_1_v5_gn_0_44621 Lactuca sativa HOM05D007151 ORTHO05D009056 4.2e-139 498.8 423 57.9
Lsat_1_v5_gn_5_90740 Lactuca sativa HOM05D007151 ORTHO05D009056 4.2e-139 498.8 423 57.9
BolC7t45451H Brassica oleracea HOM05D007151 ORTHO05D009056 9.5e-139 497.7 438 57.8
Oeu052172.1 Olea europaea HOM05D007151 ORTHO05D009056 2.8e-138 496.1 456 56.8
Hund21618 Selenicereus undatus HOM05D007151 ORTHO05D009056 3.6e-138 495.7 449 56.3
THA.LOC104826576 Tarenaya hassleriana HOM05D007151 ORTHO05D009056 8.0e-138 494.6 448 55.6
arahy.Tifrunner.gnm1.ann1.BVF972 Arachis hypogaea HOM05D007151 ORTHO05D009056 1.4e-137 493.8 447 55.9
Cc06_g23440 Coffea canephora HOM05D007151 ORTHO05D009056 1.4e-137 493.8 453 57.2
CARHR104080 Cardamine hirsuta HOM05D007151 ORTHO05D009056 5.2e-137 491.9 429 57.8
DCAR_019364 Daucus carota HOM05D007151 ORTHO05D009056 4.4e-136 488.8 431 57.8
Sp7g16040 Schrenkiella parvula HOM05D007151 ORTHO05D009056 3.5e-133 479.2 452 55.8
Phvul.009G208100 Phaseolus vulgaris HOM05D007151 ORTHO05D009056 5.0e-132 475.3 453 55.6
EL10Ac8g18840 Beta vulgaris HOM05D007151 ORTHO05D009056 8.6e-132 474.6 452 53.8
Aa31sc130G90 Aethionema arabicum HOM05D007151 ORTHO05D009056 7.3e-131 471.5 435 55.4
Migut.K00359 Erythranthe guttata HOM05D007151 ORTHO05D009056 1.6e-130 470.3 442 52.7
AUR62042027 Chenopodium quinoa HOM05D007151 ORTHO05D009056 1.0e-129 467.6 415 55.9
Sc08g0005090 Simmondsia chinensis HOM05D007151 ORTHO05D009056 3.1e-129 466.1 439 55.4
arahy.Tifrunner.gnm1.ann1.36BD1U Arachis hypogaea HOM05D007151 ORTHO05D009056 2.9e-127 459.5 420 55.5
SGA_v2.0_scaffold336G49159 Striga asiatica HOM05D007151 ORTHO05D009056 2.0e-125 453.4 428 51.4
Os06g0181400 Oryza sativa ssp. japonica HOM05D007151 ORTHO05D009056 1.2e-122 444.1 417 53.2
Sopen07g001150 Solanum pennellii HOM05D007151 ORTHO05D009056 6.2e-122 441.8 378 59.3
CDE05G1962 Ceratophyllum demersum HOM05D007151 ORTHO05D009056 2.3e-121 439.9 426 53.1
Zm00001eb268060 Zea mays HOM05D007151 ORTHO05D009056 7.5e-120 434.9 420 51.2
Ca_25731_v3 Cicer arietinum L. HOM05D007151 ORTHO05D009056 2.9e-119 433.0 400 55.2
Ah.14g078500 Amaranthus hybridus HOM05D007151 ORTHO05D009056 3.7e-119 432.6 424 52.6
CSS0035136 Camellia sinensis var. sinensis HOM05D007151 ORTHO05D009056 7.1e-118 428.3 321 63.2
SGA_v2.0_scaffold206G41840 Striga asiatica HOM05D007151 ORTHO05D009056 9.2e-118 427.9 439 49.7
SEGI_09059 Sequoiadendron giganteum HOM05D007151 ORTHO05D009056 3.1e-113 412.9 466 48.1
ATR0629G078 Amborella trichopoda HOM05D007151 ORTHO05D009056 4.4e-112 409.1 389 53.5
Rhsim01G0049000 Rhododendron simsii HOM05D007151 ORTHO05D008498 1.3e-111 407.5 380 53.9
unitig_899.g15451 Utricularia gibba HOM05D007151 ORTHO05D009056 1.6e-109 400.6 402 48.3
Lalb_Chr08g0233881 Lupinus albus HOM05D007151 ORTHO05D009056 2.7e-109 399.8 321 61.1
Carub.0013s0015 Capsella rubella HOM05D007151 ORTHO05D009056 1.3e-98 364.4 326 57.1
Mapoly0072s0110 Marchantia polymorpha HOM05D007151 ORTHO05D009056 9.3e-94 348.2 436 42.7
Pp3c21_4180 Physcomitrium patens HOM05D007151 ORTHO05D009056 1.5e-91 340.9 432 44.2
AagrBONN_evm.TU.Sc2ySwM_117.1501 Anthoceros agrestis HOM05D007151 ORTHO05D009056 1.3e-58 231.5 332 38.9
CANSAT11G0850 Cannabis sativa HOM05D007151 ORTHO05D009056 2.7e-53 213.8 127 75.6
Cc06_g23410 Coffea canephora HOM05D007151 ORTHO05D009056 2.0e-51 207.6 309 42.7
Cre02.g109800 Chlamydomonas reinhardtii HOM05D007151 ORTHO05D009056 1.2e-48 198.4 539 29.5
PRCOL_00000450 Prasinoderma coloniale HOM05D007151 ORTHO05D009056 3.5e-48 196.8 415 34.7
SMO364G0487 Selaginella moellendorffii HOM05D007151 ORTHO05D009056 3.1e-41 173.7 198 44.4
Lalb_Chr08g0233871 Lupinus albus HOM05D007151 ORTHO05D009056 7.2e-30 136.0 81 76.5
FAN11G2323 Fragaria x ananassa HOM05D007151 ORTHO05D009056 3.4e-27 127.1 74 83.8
MCO12G285 Micromonas commoda HOM05D007151 ORTHO05D009056 2.5e-22 110.9 518 25.7
TPR.G31928 Trifolium pratense HOM05D007151 ORTHO05D009056 4.0e-20 103.6 101 53.5
HPP92_018514 Vanilla planifolia HOM05D007151 ORTHO05D009056 2.2e-18 97.8 94 53.2
CBR_g19142 Chara braunii HOM05D007151 ORTHO05D009056 8.3e-18 95.9 261 29.1
FAN07G0026 Fragaria x ananassa HOM05D000007 ORTHO05D005026 2.2e-10 71.2 41 75.6
Hma1.2p1_0182F.1_g080700 Hydrangea macrophylla HOM05D007151 ORTHO05D009056 3.2e-09 67.4 44 65.9


User provided reference genes

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