Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN23G0046 Fragaria x ananassa HOM05D009914 ORTHO05D012375 1.0e-23 112.8 69 100.0
FAN23G0929 Fragaria x ananassa HOM05D009914 ORTHO05D012375 1.0e-23 112.8 69 100.0
FAN23G1284 Fragaria x ananassa HOM05D009914 ORTHO05D012375 1.0e-23 112.8 69 100.0
RcHm_v2.0_Chr2g0123801 Rosa chinensis HOM05D009914 ORTHO05D012375 4.2e-17 90.9 69 79.7
RcHm_v2.0_Chr2g0123821 Rosa chinensis HOM05D009914 ORTHO05D012375 7.8e-16 86.7 69 78.3
FAN23G1055 Fragaria x ananassa HOM05D023521 ORTHO05D012375 3.9e-15 84.3 57 94.7
RcHm_v2.0_Chr2g0123881 Rosa chinensis HOM05D009914 ORTHO05D012375 3.9e-15 84.3 69 75.4
RcHm_v2.0_Chr1g0314271 Rosa chinensis HOM05D009914 ORTHO05D012375 8.7e-15 83.2 69 65.2
RcHm_v2.0_Chr2g0123781 Rosa chinensis HOM05D009914 ORTHO05D012375 1.1e-14 82.8 69 75.4
FAN23G0079 Fragaria x ananassa HOM05D009914 ORTHO05D012375 6.2e-13 77.0 69 73.9
RcHm_v2.0_Chr1g0314291 Rosa chinensis HOM05D009914 ORTHO05D012375 4.9e-10 67.4 65 58.5
FAN23G0148 Fragaria x ananassa HOM05D009914 ORTHO05D012375 1.4e-09 65.9 70 72.9
Prupe.2G006800 Prunus persica HOM05D009914 ORTHO05D012375 1.4e-09 65.9 69 62.3
FAN23G1206 Fragaria x ananassa HOM05D009914 ORTHO05D012375 2.4e-09 65.1 70 71.4
FAN23G1595 Fragaria x ananassa HOM05D009914 ORTHO05D012375 7.1e-09 63.5 69 71.0
RcHm_v2.0_Chr2g0123791 Rosa chinensis HOM05D009914 ORTHO05D012375 2.7e-08 61.6 73 60.3
RcHm_v2.0_Chr2g0123871 Rosa chinensis HOM05D009914 ORTHO05D012375 1.0e-07 59.7 70 60.0
FAN23G0010 Fragaria x ananassa HOM05D009914 ORTHO05D012375 1.8e-07 58.9 69 63.8
Prupe.2G006400 Prunus persica HOM05D009914 ORTHO05D012375 1.8e-07 58.9 69 60.9
Rhsim07G0052800 Rhododendron simsii HOM05D036690 ORTHO05D011200 1.8e-07 58.9 67 52.2
RcHm_v2.0_Chr2g0123891 Rosa chinensis HOM05D009914 ORTHO05D012375 3.9e-07 57.8 70 60.0
Prupe.2G006200 Prunus persica HOM05D009914 ORTHO05D012375 6.7e-07 57.0 69 59.4
Potri.001G226400 Populus trichocarpa HOM05D011480 ORTHO05D011200 3.3e-06 54.7 69 49.3
Potri.001G226700 Populus trichocarpa HOM05D011480 ORTHO05D011200 3.3e-06 54.7 69 49.3
Prupe.2G006900 Prunus persica HOM05D009914 ORTHO05D012375 3.3e-06 54.7 72 65.3
Glyma.08G151100 Glycine max HOM05D012142 ORTHO05D011200 7.4e-06 53.5 69 49.3
FAN23G1519 Fragaria x ananassa HOM05D009914 ORTHO05D012375 9.6e-06 53.1 68 60.3
Potri.001G226754 Populus trichocarpa HOM05D011480 ORTHO05D011200 9.6e-06 53.1 71 53.5


User provided reference genes

Program Settings