Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN23G0913 Fragaria x ananassa HOM05D006732 ORTHO05D005682 0.0e+00 1670.2 803 100.0
FAN26G1852 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.1e-310 1067.0 845 67.1
FAN23G1322 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.0e-235 819.7 422 95.0
FAN19G2793 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.7e-234 815.5 490 84.5
FAN19G0447 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.5e-232 808.9 417 94.0
FvH4_1g04981 Fragaria vesca HOM05D006732 ORTHO05D005682 8.6e-231 804.3 416 94.0
FAN26G0545 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.3e-230 802.0 1006 48.9
FvH4_1g04892 Fragaria vesca HOM05D006732 ORTHO05D005682 4.7e-229 798.5 418 93.5
FvH4_1g04870 Fragaria vesca HOM05D006732 ORTHO05D005682 5.2e-212 741.9 376 94.1
FAN26G0144 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.2e-195 687.6 741 52.4
FAN19G1623 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.8e-165 586.6 427 71.2
RcHm_v2.0_Chr2g0090631 Rosa chinensis HOM05D006732 ORTHO05D005682 3.8e-162 576.2 435 66.2
FAN26G0599 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.5e-162 575.5 427 71.7
RcHm_v2.0_Chr7g0225411 Rosa chinensis HOM05D006732 ORTHO05D005682 7.4e-158 562.0 430 65.1
FAN23G1399 Fragaria x ananassa HOM05D006732 ORTHO05D005682 9.4e-153 545.0 462 64.1
FAN23G2814 Fragaria x ananassa HOM05D006732 ORTHO05D005682 9.4e-153 545.0 462 64.1
FvH4_1g04982 Fragaria vesca HOM05D006732 ORTHO05D005682 4.5e-147 526.2 439 63.6
FvH4_1g04980 Fragaria vesca HOM05D006732 ORTHO05D005682 3.5e-139 500.0 391 68.3
FAN19G1364 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.7e-138 497.7 389 68.1
FAN23G0359 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.8e-138 496.5 389 67.9
FvH4_1g05020 Fragaria vesca HOM05D006732 ORTHO05D005682 6.7e-135 485.7 342 69.9
FAN19G0608 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.9e-130 470.3 336 69.9
RcHm_v2.0_Chr2g0090681 Rosa chinensis HOM05D006732 ORTHO05D005682 1.9e-121 441.0 312 68.9
RcHm_v2.0_Chr2g0088891 Rosa chinensis HOM05D006732 ORTHO05D005682 3.2e-121 440.3 451 53.4
FvH4_5g09240 Fragaria vesca HOM05D006732 ORTHO05D005682 3.4e-118 430.3 436 54.6
FAN08G0591 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.8e-117 427.2 394 57.1
FAN18G2797 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.7e-115 420.6 427 53.6
FvH4_1g07310 Fragaria vesca HOM05D006732 ORTHO05D005682 9.5e-113 412.1 316 66.8
FvH4_1g07350 Fragaria vesca HOM05D006732 ORTHO05D005682 1.0e-111 408.7 310 67.1
FAN13G2469 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.9e-100 371.3 386 51.8
FAN03G1911 Fragaria x ananassa HOM05D006732 ORTHO05D005682 9.2e-100 369.0 409 49.9
FvH4_1g04650 Fragaria vesca HOM05D006732 ORTHO05D005682 1.3e-98 365.2 392 49.5
FAN19G1839 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.0e-98 364.0 386 48.7
FAN19G1442 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.4e-94 350.5 387 48.3
FAN23G1448 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.2e-91 342.0 392 48.2
FAN23G0775 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.7e-91 340.9 354 50.8
FvH4_1g04850 Fragaria vesca HOM05D006732 ORTHO05D005682 1.4e-84 318.5 169 89.9
FAN28G0011 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.6e-78 296.2 386 43.8
FAN26G1230 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.8e-75 286.2 371 43.7
RcHm_v2.0_Chr4g0406891 Rosa chinensis HOM05D006732 ORTHO05D005682 1.0e-74 285.8 398 43.7
FvH4_5g09163 Fragaria vesca HOM05D006732 ORTHO05D005682 3.1e-71 274.2 219 59.8
FvH4_1g03870 Fragaria vesca HOM05D006732 ORTHO05D005682 9.0e-71 272.7 263 53.2
FAN26G2691 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.5e-65 254.6 170 72.9
FvH4_1g03120 Fragaria vesca HOM05D006732 ORTHO05D005682 1.4e-63 248.8 365 41.6
FAN23G0993 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.8e-62 243.4 159 73.0
FAN26G0550 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.8e-62 243.4 163 71.2
FAN19G1106 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.6e-62 243.0 423 37.8
FAN26G2548 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.4e-60 238.0 333 41.4
FvH4_1g03650 Fragaria vesca HOM05D006732 ORTHO05D005682 2.8e-56 224.6 428 36.0
FAN06G2841 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.3e-50 205.7 379 39.1
FAN03G3183 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.9e-50 204.1 405 39.3
FAN26G1044 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.1e-50 203.8 745 27.4
FvH4_1g03800 Fragaria vesca HOM05D006732 ORTHO05D005682 2.5e-49 201.4 411 36.0
FAN06G4694 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.5e-49 201.4 404 37.9
FAN01G2330 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.8e-48 198.0 378 38.6
FvH4_7g04610 Fragaria vesca HOM05D006732 ORTHO05D005682 6.3e-48 196.8 404 37.6
FAN28G2932 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.9e-45 188.0 225 49.8
FAN26G3406 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.8e-42 178.7 211 49.3
FAN14G2290 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.3e-42 178.3 336 36.9
RcHm_v2.0_Chr2g0090141 Rosa chinensis HOM05D006732 ORTHO05D005682 5.1e-42 177.2 160 53.1
FAN05G1364 Fragaria x ananassa HOM05D006732 ORTHO05D005682 8.8e-42 176.4 384 35.4
FAN10G1871 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.2e-37 161.8 309 39.8
FAN19G1133 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.5e-37 160.2 403 32.0
FAN19G1213 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.5e-37 160.2 391 32.2
RcHm_v2.0_Chr2g0089871 Rosa chinensis HOM05D006732 ORTHO05D005682 2.7e-35 154.8 131 55.0
FvH4_1g03730 Fragaria vesca HOM05D006732 ORTHO05D005682 1.0e-34 152.9 256 36.3
FvH4_6g38540 Fragaria vesca HOM05D006732 ORTHO05D005682 3.0e-34 151.4 396 30.8
MD02G1004600 Malus domestica HOM05D006732 ORTHO05D005682 1.5e-33 149.1 382 34.6
FAN19G2470 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.4e-33 147.5 352 33.2
FvH4_1g07301 Fragaria vesca HOM05D006732 ORTHO05D005682 2.8e-32 144.8 103 68.9
FvH4_6g52510 Fragaria vesca HOM05D013417 ORTHO05D022618 1.0e-26 126.3 334 32.9
FAN28G1694 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.0e-26 126.3 169 42.6
FAN08G2174 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.8e-26 125.6 102 58.8
FAN19G1906 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.3e-26 125.2 147 43.5
FvH4_3g44180 Fragaria vesca HOM05D031336 ORTHO05D029596 9.7e-25 119.8 417 27.1
FAN11G3653 Fragaria x ananassa HOM05D031336 ORTHO05D029596 9.7e-25 119.8 417 27.1
FAN19G1560 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.7e-24 117.9 180 45.6
RcHm_v2.0_Chr1g0376501 Rosa chinensis HOM05D008398 ORTHO05D005682 6.3e-24 117.1 270 35.6
FAN28G1562 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.4e-23 115.2 72 73.6
FvH4_7g31682 Fragaria vesca HOM05D010677 ORTHO05D012678 2.0e-22 112.1 272 30.9
FAN03G1932 Fragaria x ananassa HOM05D018501 ORTHO05D020617 2.0e-22 112.1 390 27.9
RcHm_v2.0_Chr1g0337091 Rosa chinensis HOM05D010677 ORTHO05D012678 3.5e-22 111.3 212 35.8
FvH4_7g30461 Fragaria vesca HOM05D008398 ORTHO05D035411 2.9e-21 108.2 330 28.8
Prupe.7G110000 Prunus persica HOM05D006732 ORTHO05D005682 2.9e-21 108.2 291 32.0
FAN03G3389 Fragaria x ananassa HOM05D010677 ORTHO05D012678 3.8e-21 107.8 279 30.1
RcHm_v2.0_Chr1g0379901 Rosa chinensis HOM05D008398 ORTHO05D005682 3.8e-21 107.8 368 32.3
RcHm_v2.0_Chr1g0329851 Rosa chinensis HOM05D006732 ORTHO05D005682 8.5e-21 106.7 219 38.4
RcHm_v2.0_Chr5g0043771 Rosa chinensis HOM05D018501 ORTHO05D020617 1.1e-20 106.3 382 28.5
FAN14G4282 Fragaria x ananassa HOM05D013417 ORTHO05D022618 1.5e-20 105.9 335 29.6
FAN06G4869 Fragaria x ananassa HOM05D018501 ORTHO05D020617 4.2e-20 104.4 341 29.0
RcHm_v2.0_Chr1g0379941 Rosa chinensis HOM05D008398 ORTHO05D005682 4.2e-20 104.4 359 31.8
FvH4_4g12220 Fragaria vesca HOM05D013417 ORTHO05D022618 5.5e-20 104.0 309 31.1
FAN19G3146 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.5e-20 104.0 206 36.4
FvH4_2g38420 Fragaria vesca HOM05D013417 ORTHO05D022618 7.2e-20 103.6 326 31.0
FAN23G1684 Fragaria x ananassa HOM05D006732 ORTHO05D005682 9.4e-20 103.2 177 34.5
FAN12G2017 Fragaria x ananassa HOM05D013417 ORTHO05D022618 1.6e-19 102.4 308 30.5
Prupe.2G176100 Prunus persica HOM05D006732 ORTHO05D005682 1.6e-19 102.4 219 34.7
FvH4_7g04500 Fragaria vesca HOM05D018501 ORTHO05D020617 2.1e-19 102.1 348 29.6
RcHm_v2.0_Chr1g0337131 Rosa chinensis HOM05D006732 ORTHO05D012678 2.1e-19 102.1 205 35.1
FAN01G2543 Fragaria x ananassa HOM05D008398 ORTHO05D046348 2.7e-19 101.7 323 30.3
FAN03G2148 Fragaria x ananassa HOM05D018501 ORTHO05D020617 3.6e-19 101.3 449 27.2
FAN06G3627 Fragaria x ananassa HOM05D008398 ORTHO05D005682 4.7e-19 100.9 271 31.4
FvH4_7g30470 Fragaria vesca HOM05D008398 ORTHO05D046348 1.0e-18 99.8 329 29.5
FAN15G3012 Fragaria x ananassa HOM05D010677 ORTHO05D012678 1.0e-18 99.8 274 31.8
FAN18G2036 Fragaria x ananassa HOM05D013417 ORTHO05D005682 1.0e-18 99.8 296 31.8
FvH4_7g31260 Fragaria vesca HOM05D010677 ORTHO05D012678 1.4e-18 99.4 274 29.2
FvH4_5g34640 Fragaria vesca HOM05D008398 ORTHO05D005682 3.0e-18 98.2 354 31.1
RcHm_v2.0_Chr1g0380941 Rosa chinensis HOM05D006732 ORTHO05D005682 4.0e-18 97.8 322 28.6
FAN06G1115 Fragaria x ananassa HOM05D010677 ORTHO05D012678 5.2e-18 97.4 274 28.5
FAN06G1601 Fragaria x ananassa HOM05D010677 ORTHO05D012678 5.2e-18 97.4 274 28.5
FAN26G3385 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.2e-18 97.4 146 40.4
Prupe.6G029800 Prunus persica HOM05D006732 ORTHO05D005682 5.2e-18 97.4 207 32.9
FAN06G1563 Fragaria x ananassa HOM05D018501 ORTHO05D020617 8.8e-18 96.7 302 29.8
FvH4_7g16534 Fragaria vesca HOM05D008398 ORTHO05D046322 1.2e-17 96.3 333 30.9
FAN18G3618 Fragaria x ananassa HOM05D008398 ORTHO05D005682 1.2e-17 96.3 295 31.2
FAN23G2570 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.2e-17 96.3 80 61.2
FAN19G2055 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.5e-17 95.9 81 56.8
FvH4_1g03530 Fragaria vesca HOM05D006732 ORTHO05D005682 2.6e-17 95.1 141 43.3
FAN05G0770 Fragaria x ananassa HOM05D008398 ORTHO05D005682 4.4e-17 94.4 334 30.8
FAN23G1145 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.7e-17 94.0 65 64.6
RcHm_v2.0_Chr5g0043731 Rosa chinensis HOM05D018501 ORTHO05D020617 5.7e-17 94.0 413 27.4
FAN23G1506 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.5e-17 93.6 69 66.7
FAN28G2349 Fragaria x ananassa HOM05D006732 ORTHO05D005682 9.7e-17 93.2 118 41.5
FAN28G2648 Fragaria x ananassa HOM05D006732 ORTHO05D005682 9.7e-17 93.2 118 41.5
FvH4_6g50450 Fragaria vesca HOM05D008398 ORTHO05D005682 1.3e-16 92.8 376 29.3
FAN10G0863 Fragaria x ananassa HOM05D008398 ORTHO05D005682 1.7e-16 92.4 265 31.7
FAN12G2010 Fragaria x ananassa HOM05D013417 ORTHO05D022618 2.8e-16 91.7 303 29.7
FAN06G2795 Fragaria x ananassa HOM05D008398 ORTHO05D046322 2.4e-15 88.6 266 31.6
FvH4_7g31320 Fragaria vesca HOM05D010677 ORTHO05D012678 4.1e-15 87.8 237 29.5
FvH4_7g31670 Fragaria vesca HOM05D010677 ORTHO05D012678 2.0e-14 85.5 195 31.8
FvH4_5g09162 Fragaria vesca HOM05D006732 ORTHO05D005682 7.7e-14 83.6 155 41.9
FAN23G1741 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.7e-13 82.4 144 37.5
FAN09G2688 Fragaria x ananassa HOM05D008398 ORTHO05D005682 2.2e-13 82.0 289 29.4
FAN10G1111 Fragaria x ananassa HOM05D000122 ORTHO05D000139 2.9e-13 81.6 232 29.3
FAN06G3455 Fragaria x ananassa HOM05D010677 ORTHO05D012678 6.5e-13 80.5 451 25.7
FAN06G5012 Fragaria x ananassa HOM05D010677 ORTHO05D012678 6.5e-13 80.5 449 25.2
FAN10G3802 Fragaria x ananassa HOM05D008398 ORTHO05D035411 6.5e-13 80.5 198 31.3
QL02p081954 Quercus lobata HOM05D006732 ORTHO05D005682 6.5e-13 80.5 352 26.1
FAN06G0815 Fragaria x ananassa HOM05D005379 ORTHO05D006661 8.5e-13 80.1 279 27.6
FAN19G0291 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.1e-12 79.7 160 36.2
FvH4_1g04991 Fragaria vesca HOM05D006732 ORTHO05D005682 1.5e-12 79.3 184 38.0
FAN03G1797 Fragaria x ananassa HOM05D008398 ORTHO05D029520 1.5e-12 79.3 256 29.7
FAN03G3131 Fragaria x ananassa HOM05D008398 ORTHO05D029520 1.5e-12 79.3 256 29.7
FAN19G1354 Fragaria x ananassa HOM05D006732 ORTHO05D035266 1.9e-12 79.0 199 35.7
FvH4_7g27001 Fragaria vesca HOM05D010677 ORTHO05D012678 3.2e-12 78.2 276 27.5
FvH4_1g04520 Fragaria vesca HOM05D006732 ORTHO05D005682 4.2e-12 77.8 82 45.1
FAN12G0204 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.2e-11 76.3 103 39.8
FAN04G2845 Fragaria x ananassa HOM05D010677 ORTHO05D012678 1.6e-11 75.9 291 26.8
FAN10G3231 Fragaria x ananassa HOM05D000122 ORTHO05D000139 6.1e-11 73.9 196 29.6
FAN03G0822 Fragaria x ananassa HOM05D010677 ORTHO05D012678 8.0e-11 73.6 165 30.9
FAN03G2566 Fragaria x ananassa HOM05D008398 ORTHO05D005682 8.0e-11 73.6 198 31.3
FAN01G1167 Fragaria x ananassa HOM05D000122 ORTHO05D000139 4.0e-10 71.2 221 29.4
RcHm_v2.0_Chr2g0090221 Rosa chinensis HOM05D006732 ORTHO05D005682 8.8e-10 70.1 117 31.6
FAN06G1013 Fragaria x ananassa HOM05D005379 ORTHO05D006661 1.5e-09 69.3 271 26.6
FvH4_1g04910 Fragaria vesca HOM05D006732 ORTHO05D046085 3.4e-09 68.2 54 51.9
FAN23G1373 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.4e-09 67.8 50 60.0
FAN19G2861 Fragaria x ananassa HOM05D006732 ORTHO05D046085 7.5e-09 67.0 51 54.9
FAN01G0845 Fragaria x ananassa HOM05D008398 ORTHO05D029520 1.3e-08 66.2 219 27.4
QL02p078454 Quercus lobata HOM05D006732 ORTHO05D005682 1.3e-08 66.2 134 33.6
FAN10G3871 Fragaria x ananassa HOM05D008398 ORTHO05D005682 2.2e-08 65.5 219 27.4
FvH4_4g06201 Fragaria vesca HOM05D006732 ORTHO05D005682 2.8e-08 65.1 107 43.9
FAN06G0523 Fragaria x ananassa HOM05D008398 ORTHO05D005682 2.8e-08 65.1 237 26.2
FvH4_7g31310 Fragaria vesca HOM05D000122 ORTHO05D012678 3.7e-08 64.7 118 33.9
FAN05G1573 Fragaria x ananassa HOM05D008398 ORTHO05D005682 3.7e-08 64.7 194 30.9
FAN10G3441 Fragaria x ananassa HOM05D008398 ORTHO05D005682 8.3e-08 63.5 219 28.3
FvH4_4g06202 Fragaria vesca HOM05D006732 ORTHO05D005682 1.1e-07 63.2 51 51.0
FvH4_7g30481 Fragaria vesca HOM05D008398 ORTHO05D029520 1.1e-07 63.2 219 27.4
FAN03G1279 Fragaria x ananassa HOM05D008398 ORTHO05D005682 1.4e-07 62.8 179 30.7
COL.COLO4_29430 Corchorus olitorius HOM05D035412 ORTHO05D019051 2.4e-07 62.0 279 23.3
QL09p046495 Quercus lobata HOM05D007419 ORTHO05D009327 2.4e-07 62.0 167 31.1
FvH4_7g28941 Fragaria vesca HOM05D006732 ORTHO05D005682 4.1e-07 61.2 136 34.6
RcHm_v2.0_Chr5g0014821 Rosa chinensis HOM05D006732 ORTHO05D005682 4.1e-07 61.2 301 25.9
FAN22G0443 Fragaria x ananassa HOM05D013417 ORTHO05D005682 7.0e-07 60.5 223 26.5
Prupe.6G083000 Prunus persica HOM05D006765 ORTHO05D005682 1.2e-06 59.7 209 28.2
FvH4_4g00460 Fragaria vesca HOM05D031586 ORTHO05D045486 1.6e-06 59.3 246 28.5
FAN26G2332 Fragaria x ananassa HOM05D003111 ORTHO05D003502 5.9e-06 57.4 42 64.3


User provided reference genes

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