Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN23G0907 Fragaria x ananassa HOM05D013332 ORTHO05D004477 2.1e-89 332.4 173 100.0
FAN28G1274 Fragaria x ananassa HOM05D013332 ORTHO05D004477 6.8e-85 317.4 173 96.0
FAN26G3011 Fragaria x ananassa HOM05D013332 ORTHO05D004477 1.1e-82 310.1 170 94.7
FAN19G2695 Fragaria x ananassa HOM05D013332 ORTHO05D004477 7.3e-79 297.4 170 88.2
RcHm_v2.0_Chr2g0112381 Rosa chinensis HOM05D013332 ORTHO05D004477 1.2e-76 290.0 174 85.6
FvH4_1g20240 Fragaria vesca HOM05D013332 ORTHO05D004477 1.7e-75 286.2 170 88.8
CiPaw.03G145800 Carya illinoinensis HOM05D008176 ORTHO05D004477 3.0e-16 89.4 170 45.3
QL06p048130 Quercus lobata HOM05D008176 ORTHO05D004477 3.4e-15 85.9 171 43.9
Nn5g30002 Nelumbo nucifera HOM05D008176 ORTHO05D004477 2.8e-14 82.8 176 37.5
Peaxi162Scf00237g00201 Petunia axillaris HOM05D008176 ORTHO05D004477 8.3e-14 81.3 164 39.0
Atru.chr3.1344 Acer truncatum HOM05D008176 ORTHO05D004477 2.4e-13 79.7 173 40.5
Sopen11g005030 Solanum pennellii HOM05D008176 ORTHO05D004477 1.6e-12 77.0 159 37.7
COL.COLO4_27295 Corchorus olitorius HOM05D008176 ORTHO05D004477 2.7e-12 76.3 174 38.5
Duzib187G0825 Durio zibethinus HOM05D008176 ORTHO05D004477 5.9e-12 75.1 173 40.5
CiPaw.04G103600 Carya illinoinensis HOM05D008176 ORTHO05D004477 7.7e-12 74.7 171 39.8
Duzib264G0386 Durio zibethinus HOM05D008176 ORTHO05D004477 7.7e-12 74.7 163 39.9
Solyc11g010250.1 Solanum lycopersicum HOM05D008176 ORTHO05D004477 1.7e-11 73.6 159 39.0
PGSC0003DMG400016149 Solanum tuberosum HOM05D008176 ORTHO05D004477 2.2e-11 73.2 159 40.3
Manes.12G129900 Manihot esculenta HOM05D008176 ORTHO05D004477 2.9e-11 72.8 168 41.1
Thecc.01G095600 Theobroma cacao HOM05D008176 ORTHO05D004477 1.5e-10 70.5 174 37.4
Cc10_g06700 Coffea canephora HOM05D008046 ORTHO05D004477 2.5e-10 69.7 171 32.2
TAR625G0942 Trochodendron aralioides HOM05D008046 ORTHO05D004477 2.5e-10 69.7 174 38.5
Sopen05g029890 Solanum pennellii HOM05D008176 ORTHO05D004477 1.6e-09 67.0 159 37.7
TAR628G0226 Trochodendron aralioides HOM05D008046 ORTHO05D004477 1.6e-09 67.0 173 35.3
Haze_24851 Corylus avellana HOM05D008176 ORTHO05D004477 3.6e-09 65.9 171 38.0
Sc26g0000200 Simmondsia chinensis HOM05D013332 ORTHO05D004477 3.6e-09 65.9 156 38.5
Nitab4.5_0012818g0010 Nicotiana tabacum HOM05D008176 ORTHO05D004477 1.0e-08 64.3 162 35.2
Glyma.11G242100 Glycine max HOM05D008176 ORTHO05D004477 2.3e-08 63.2 158 34.8
Gohir.A11G051100 Gossypium hirsutum HOM05D008176 ORTHO05D004477 2.3e-08 63.2 181 35.9
Medtr3g086830 Medicago truncatula HOM05D008176 ORTHO05D004477 2.3e-08 63.2 180 33.3
TPR.G16006 Trifolium pratense HOM05D008176 ORTHO05D004477 2.3e-08 63.2 175 33.7
Ca_08988_v3 Cicer arietinum L. HOM05D008176 ORTHO05D004477 6.8e-08 61.6 165 34.5
Gorai.007G059700 Gossypium raimondii HOM05D008176 ORTHO05D004477 8.8e-08 61.2 180 33.9
CANSAT01G0943 Cannabis sativa HOM05D013332 ORTHO05D004477 1.2e-07 60.8 169 37.3
Lsat_1_v5_gn_1_3180 Lactuca sativa HOM05D008046 ORTHO05D004477 1.2e-07 60.8 167 34.7
Aqoxy6G00716 Aquilegia oxysepala HOM05D008046 ORTHO05D004477 1.5e-07 60.5 171 34.5
Gohir.A02G129700 Gossypium hirsutum HOM05D008176 ORTHO05D004477 2.0e-07 60.1 169 33.1
Nitab4.5_0003888g0010 Nicotiana tabacum HOM05D013332 ORTHO05D004477 2.0e-07 60.1 108 41.7
Glyma.08G133100 Glycine max HOM05D008176 ORTHO05D004477 3.4e-07 59.3 166 34.9
TWI12G0518 Tripterygium wilfordii HOM05D008046 ORTHO05D004477 3.4e-07 59.3 169 33.7
VMungo1383G1959 Vigna mungo HOM05D008176 ORTHO05D004477 3.4e-07 59.3 159 37.1
TPR.G6203 Trifolium pratense HOM05D008176 ORTHO05D004477 4.4e-07 58.9 169 35.5
Phvul.001G253900 Phaseolus vulgaris HOM05D008176 ORTHO05D004477 5.7e-07 58.5 171 35.1
Hma1.2p1_0019F.1_g013800 Hydrangea macrophylla HOM05D013332 ORTHO05D004477 1.3e-06 57.4 184 29.9
Nitab4.5_0000241g0190 Nicotiana tabacum HOM05D008176 ORTHO05D004477 1.3e-06 57.4 108 40.7
COL.COLO4_12009 Corchorus olitorius HOM05D008046 ORTHO05D004477 1.7e-06 57.0 177 31.6
Potri.005G072000 Populus trichocarpa HOM05D008176 ORTHO05D004477 1.7e-06 57.0 170 32.4
Sc03g0000170 Simmondsia chinensis HOM05D031888 ORTHO05D004477 2.2e-06 56.6 205 31.7
Sc23g0000380 Simmondsia chinensis HOM05D008046 ORTHO05D004477 2.2e-06 56.6 154 36.4
Ah.02g126210 Amaranthus hybridus HOM05D031888 ORTHO05D004477 2.8e-06 56.2 185 29.7
Gorai.003G041400 Gossypium raimondii HOM05D008176 ORTHO05D004477 2.8e-06 56.2 169 32.5
Phvul.002G260800 Phaseolus vulgaris HOM05D008176 ORTHO05D004477 2.8e-06 56.2 170 28.8
CSS0046665 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 3.7e-06 55.8 162 33.3
Ciclev10026640m.g Citrus clementina HOM05D008176 ORTHO05D004477 3.7e-06 55.8 170 35.3
Gohir.D03G040500 Gossypium hirsutum HOM05D008176 ORTHO05D004477 3.7e-06 55.8 169 32.0
Glyma.05G175800 Glycine max HOM05D008176 ORTHO05D004477 4.9e-06 55.5 170 31.8
CSS0041686 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 6.3e-06 55.1 162 33.3
Glyma.18G015000 Glycine max HOM05D008176 ORTHO05D004477 6.3e-06 55.1 126 37.3
Sabra07G0080300 Salix brachista HOM05D008176 ORTHO05D004477 6.3e-06 55.1 166 36.1
TWI53G0271 Tripterygium wilfordii HOM05D008176 ORTHO05D004477 6.3e-06 55.1 170 30.0
GSVIVG01009081001 Vitis vinifera HOM05D008046 ORTHO05D004477 6.3e-06 55.1 172 31.4
CSS0034401 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 8.3e-06 54.7 165 34.5


User provided reference genes

Program Settings