Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN23G0903 Fragaria x ananassa HOM05D005391 ORTHO05D006694 1.4e-93 346.3 180 100.0
FAN26G2573 Fragaria x ananassa HOM05D005391 ORTHO05D006694 8.8e-59 230.7 163 79.8
FAN23G2258 Fragaria x ananassa HOM05D005391 ORTHO05D006694 1.2e-55 220.3 153 80.4
FAN20G0870 Fragaria x ananassa HOM05D005391 ORTHO05D006694 5.9e-39 164.9 176 60.2
FAN15G0439 Fragaria x ananassa HOM05D005391 ORTHO05D006694 1.0e-38 164.1 176 60.2
RcHm_v2.0_Chr6g0303761 Rosa chinensis HOM05D005391 ORTHO05D006694 2.9e-38 162.5 187 57.2
FAN27G0224 Fragaria x ananassa HOM05D005391 ORTHO05D006694 8.5e-38 161.0 177 60.5
FvH4_2g37750 Fragaria vesca HOM05D005391 ORTHO05D006694 1.9e-37 159.8 177 59.9
MD15G1005900 Malus domestica HOM05D005391 ORTHO05D006694 1.0e-30 137.5 191 49.7
MD08G1006700 Malus domestica HOM05D005391 ORTHO05D006694 2.3e-30 136.3 191 50.8
Prupe.1G358600 Prunus persica HOM05D005391 ORTHO05D006694 1.4e-27 127.1 181 50.8
Potri.012G099200 Populus trichocarpa HOM05D005391 ORTHO05D006694 1.1e-24 117.5 184 46.7
Sed0002904 Sechium edule HOM05D005391 ORTHO05D006694 5.4e-24 115.2 186 45.7
Potri.015G097800 Populus trichocarpa HOM05D005391 ORTHO05D006694 7.0e-24 114.8 181 47.5
Sabra12G0072400 Salix brachista HOM05D005391 ORTHO05D006694 1.2e-23 114.0 187 44.9
CiPaw.11G006200 Carya illinoinensis HOM05D005391 ORTHO05D006694 2.7e-23 112.8 196 46.4
Lj1g0005006 Lotus japonicus HOM05D005391 ORTHO05D006694 2.7e-23 112.8 181 44.2
Ciclev10032864m.g Citrus clementina HOM05D005391 ORTHO05D006694 7.8e-23 111.3 180 48.9
CiPaw.12G044000 Carya illinoinensis HOM05D005391 ORTHO05D006694 1.0e-22 110.9 182 45.6
CsaV3_1G000500 Cucumis sativus L. HOM05D005391 ORTHO05D006694 1.3e-22 110.5 196 44.9
Dinv23158 Davidia involucrata HOM05D005391 ORTHO05D006694 1.3e-22 110.5 176 47.2
MELO3C026202.2 Cucumis melo HOM05D005391 ORTHO05D006694 1.7e-22 110.2 186 45.2
Ca_16053_v3 Cicer arietinum L. HOM05D005391 ORTHO05D006694 8.6e-22 107.8 183 44.8
Thecc.03G130500 Theobroma cacao HOM05D005391 ORTHO05D006694 1.5e-21 107.1 195 46.2
Manes.14G050400 Manihot esculenta HOM05D005391 ORTHO05D006694 1.9e-21 106.7 197 41.6
Psat5g051960 Pisum sativum HOM05D005391 ORTHO05D006694 7.3e-21 104.8 181 42.5
TAR629G0488 Trochodendron aralioides HOM05D005391 ORTHO05D006694 7.3e-21 104.8 153 46.4
TWI23G0649 Tripterygium wilfordii HOM05D005391 ORTHO05D006694 2.8e-20 102.8 195 42.1
Atru.chr6.1808 Acer truncatum HOM05D005391 ORTHO05D006694 3.6e-20 102.4 170 44.7
Gorai.001G058300 Gossypium raimondii HOM05D005391 ORTHO05D006694 3.6e-20 102.4 195 45.6
Medtr3g099130 Medicago truncatula HOM05D005391 ORTHO05D006694 3.6e-20 102.4 180 42.2
TWI14G1436 Tripterygium wilfordii HOM05D005391 ORTHO05D006694 3.6e-20 102.4 192 42.2
Lalb_Chr23g0273681 Lupinus albus HOM05D005391 ORTHO05D006694 4.7e-20 102.1 180 42.8
vmacro16727 Vaccinium macrocarpon HOM05D005391 ORTHO05D006694 4.7e-20 102.1 181 43.6
Gohir.A07G050600 Gossypium hirsutum HOM05D005391 ORTHO05D006694 6.1e-20 101.7 195 45.1
TPR.G14215 Trifolium pratense HOM05D005391 ORTHO05D006694 6.1e-20 101.7 184 42.9
Gohir.D07G055100 Gossypium hirsutum HOM05D005391 ORTHO05D006694 8.0e-20 101.3 195 45.1
Glyma.04G196600 Glycine max HOM05D005391 ORTHO05D006694 1.0e-19 100.9 172 43.0
Sabra15G0118500 Salix brachista HOM05D005391 ORTHO05D006694 1.4e-19 100.5 203 42.9
Actinidia36818 Actinidia chinensis HOM05D005391 ORTHO05D006694 1.8e-19 100.1 171 43.9
Lsat_1_v5_gn_4_81240 Lactuca sativa HOM05D005391 ORTHO05D006694 3.0e-19 99.4 177 44.6
CANSAT80G1472 Cannabis sativa HOM05D005391 ORTHO05D006694 4.0e-19 99.0 194 41.2
TAR371G0831 Trochodendron aralioides HOM05D005391 ORTHO05D006694 4.0e-19 99.0 161 42.9
Glyma.06G169200 Glycine max HOM05D005391 ORTHO05D006694 5.2e-19 98.6 163 44.8
COL.COLO4_28143 Corchorus olitorius HOM05D005391 ORTHO05D006694 8.9e-19 97.8 187 43.3
Phvul.009G165600 Phaseolus vulgaris HOM05D005391 ORTHO05D006694 2.0e-18 96.7 181 42.0
CSS0003205 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 2.6e-18 96.3 172 44.8
CSS0033680 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 2.6e-18 96.3 172 44.8
Peaxi162Scf00045g01932 Petunia axillaris HOM05D005391 ORTHO05D006694 2.6e-18 96.3 181 40.3
Hund08624 Selenicereus undatus HOM05D005391 ORTHO05D006694 5.7e-18 95.1 164 42.1
Cpa.g.sc13.100 Carica papaya HOM05D005391 ORTHO05D006694 7.5e-18 94.7 184 42.4
Duzib205G0229 Durio zibethinus HOM05D005391 ORTHO05D006694 7.5e-18 94.7 193 42.0
MBI07_g28244_MAGBIO Magnolia biondii HOM05D005391 ORTHO05D006694 7.5e-18 94.7 157 45.2
Nn4g22289 Nelumbo nucifera HOM05D005391 ORTHO05D006694 7.5e-18 94.7 163 43.6
CSS0043065 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 2.9e-17 92.8 181 42.5
THA.LOC104798944 Tarenaya hassleriana HOM05D005391 ORTHO05D006694 4.9e-17 92.0 173 41.0
Nitab4.5_0000264g0120 Nicotiana tabacum HOM05D005391 ORTHO05D006694 1.8e-16 90.1 186 38.7
Rhsim12G0176000 Rhododendron simsii HOM05D005391 ORTHO05D006694 2.4e-16 89.7 183 41.5
CARHR277330 Cardamine hirsuta HOM05D005391 ORTHO05D006694 3.2e-16 89.4 168 44.0
Sp2g26560 Schrenkiella parvula HOM05D005391 ORTHO05D006694 3.2e-16 89.4 172 43.6
GSVIVG01008565001 Vitis vinifera HOM05D005391 ORTHO05D006694 3.2e-16 89.4 167 43.7
DCAR_016386 Daucus carota HOM05D005391 ORTHO05D006694 4.1e-16 89.0 178 40.4
Nn3g16438 Nelumbo nucifera HOM05D005391 ORTHO05D006694 4.1e-16 89.0 162 39.5
Cc08_g07550 Coffea canephora HOM05D005391 ORTHO05D006694 5.4e-16 88.6 199 38.7
Lj5A95T81 Lonicera japonica HOM05D005391 ORTHO05D006694 7.0e-16 88.2 206 36.9
SGA_v2.0_scaffold169G38603 Striga asiatica HOM05D005391 ORTHO05D006694 7.0e-16 88.2 178 41.6
BolC3t18550H Brassica oleracea HOM05D005391 ORTHO05D006694 1.2e-15 87.4 172 41.3
A09p08280 Brassica napus HOM05D005391 ORTHO05D006694 2.0e-15 86.7 163 43.6
ECA232G1626 Erigeron canadensis HOM05D005391 ORTHO05D006694 2.0e-15 86.7 165 41.8
AL8G40540 Arabidopsis lyrata HOM05D005391 ORTHO05D006694 2.7e-15 86.3 174 43.1
C03p62960 Brassica napus HOM05D005391 ORTHO05D006694 2.7e-15 86.3 172 40.7
Migut.E01449 Erythranthe guttata HOM05D005391 ORTHO05D006694 2.7e-15 86.3 209 38.3
Aa31LG1G18560 Aethionema arabicum HOM05D005391 ORTHO05D006694 4.6e-15 85.5 179 40.8
BraA09t36478Z Brassica rapa HOM05D005391 ORTHO05D006694 4.6e-15 85.5 163 43.6
Ca_01190_v3 Cicer arietinum L. HOM05D005391 ORTHO05D006694 5.9e-15 85.1 133 45.1
arahy.Tifrunner.gnm1.ann1.S11VKX Arachis hypogaea HOM05D005391 ORTHO05D006694 7.8e-15 84.7 196 38.3
A06p30110 Brassica napus HOM05D005391 ORTHO05D006694 7.8e-15 84.7 171 40.9
BraA06t25962Z Brassica rapa HOM05D005391 ORTHO05D006694 7.8e-15 84.7 171 40.9
PGSC0003DMG400026284 Solanum tuberosum HOM05D005391 ORTHO05D006694 7.8e-15 84.7 195 35.9
Haze_07152 Corylus avellana HOM05D005391 ORTHO05D006694 1.0e-14 84.3 193 39.9
Oeu009657.1 Olea europaea HOM05D005391 ORTHO05D006694 1.3e-14 84.0 204 36.8
ClCG06G017970 Citrullus lanatus HOM05D005391 ORTHO05D006694 1.7e-14 83.6 245 33.9
Cfa018784 Carpinus fangiana HOM05D005391 ORTHO05D006694 2.3e-14 83.2 193 39.9
AUR62003784 Chenopodium quinoa HOM05D005391 ORTHO05D006694 2.3e-14 83.2 166 38.6
PSO478G3696 Papaver somniferum HOM05D005391 ORTHO05D006694 2.3e-14 83.2 162 39.5
BcaB04g19920 Brassica carinata HOM05D005391 ORTHO05D006694 3.9e-14 82.4 169 42.6
PSO017G3900 Papaver somniferum HOM05D005391 ORTHO05D006694 3.9e-14 82.4 162 38.9
ATR0171G017 Amborella trichopoda HOM05D005391 ORTHO05D006694 5.0e-14 82.0 157 38.9
AUR62002017 Chenopodium quinoa HOM05D005391 ORTHO05D006694 6.6e-14 81.6 166 38.6
Thhalv10004987m.g Eutrema salsugineum HOM05D005391 ORTHO05D006694 8.6e-14 81.3 179 38.5
EL10Ac6g15093 Beta vulgaris HOM05D005391 ORTHO05D006694 1.9e-13 80.1 171 38.0
Zm00001eb421130 Zea mays HOM05D005391 ORTHO05D006694 1.9e-13 80.1 160 37.5
Aqoxy3G01572 Aquilegia oxysepala HOM05D005391 ORTHO05D006694 2.5e-13 79.7 159 35.8
Ah.03g143420 Amaranthus hybridus HOM05D005391 ORTHO05D006694 3.3e-13 79.3 165 38.8
arahy.Tifrunner.gnm1.ann1.3A01UJ Arachis hypogaea HOM05D005391 ORTHO05D006694 3.3e-13 79.3 204 36.3
FvH4_1g29942 Fragaria vesca HOM05D005391 ORTHO05D006694 3.3e-13 79.3 51 82.4
unitig_32.g10935 Utricularia gibba HOM05D005391 ORTHO05D006694 3.3e-13 79.3 207 36.7
MSTRG.25825 Avicennia marina HOM05D005391 ORTHO05D006694 4.3e-13 79.0 208 35.1
HanXRQChr09g0273301 Helianthus annuus HOM05D005391 ORTHO05D006694 9.5e-13 77.8 121 46.3
BcaB02g09758 Brassica carinata HOM05D005391 ORTHO05D006694 1.6e-12 77.0 168 38.7
QL10p002677 Quercus lobata HOM05D005391 ORTHO05D006694 6.2e-12 75.1 186 38.2
Actinidia08882 Actinidia chinensis HOM05D005391 ORTHO05D006694 8.0e-12 74.7 145 42.1
Carub.0008s2418 Capsella rubella HOM05D005391 ORTHO05D006694 8.0e-12 74.7 173 36.4
Sopen08g002620 Solanum pennellii HOM05D005391 ORTHO05D006694 8.0e-12 74.7 195 32.8
CDE04G2377 Ceratophyllum demersum HOM05D005391 ORTHO05D006694 1.1e-11 74.3 161 37.3
CDE10G0912 Ceratophyllum demersum HOM05D005391 ORTHO05D006694 1.1e-11 74.3 155 37.4
Solyc08g006670.3 Solanum lycopersicum HOM05D005391 ORTHO05D006694 2.3e-11 73.2 195 32.8
AT5G63480 Arabidopsis thaliana HOM05D005391 ORTHO05D006694 2.6e-10 69.7 174 36.8
Aqoxy3G00618 Aquilegia oxysepala HOM05D005391 ORTHO05D006694 7.5e-10 68.2 174 35.1
SalBow8G3527 Salvia bowleyana HOM05D005391 ORTHO05D006694 7.5e-10 68.2 198 34.8
arahy.Tifrunner.gnm1.ann1.CP8X4X Arachis hypogaea HOM05D005391 ORTHO05D006694 1.7e-09 67.0 238 31.1
arahy.Tifrunner.gnm1.ann1.HT4698 Arachis hypogaea HOM05D005391 ORTHO05D006694 1.7e-09 67.0 238 31.1
FAN19G2931 Fragaria x ananassa HOM05D005391 ORTHO05D205899 2.2e-09 66.6 57 68.4
SEGI_01116 Sequoiadendron giganteum HOM05D005391 ORTHO05D006694 3.7e-09 65.9 165 34.5
Sc04g0000550 Simmondsia chinensis HOM05D005391 ORTHO05D006694 3.7e-09 65.9 130 40.0
BolC9t53848H Brassica oleracea HOM05D005391 ORTHO05D006694 4.9e-09 65.5 160 36.9
VMungo1309G0665 Vigna mungo HOM05D005391 ORTHO05D006694 4.9e-09 65.5 119 42.0
Ah.07g204620 Amaranthus hybridus HOM05D005391 ORTHO05D006694 1.4e-08 63.9 140 37.9
CSS0010891 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 4.1e-08 62.4 119 43.7
HPP92_023119 Vanilla planifolia HOM05D005391 ORTHO05D006694 1.6e-07 60.5 152 34.2
BcaC04g23332 Brassica carinata HOM05D005391 ORTHO05D006694 2.0e-07 60.1 157 35.0
C09p09360 Brassica napus HOM05D005391 ORTHO05D006694 2.0e-07 60.1 157 35.0
Mapoly0007s0225 Marchantia polymorpha HOM05D005391 ORTHO05D006694 4.6e-07 58.9 152 35.5
Oeu040668.1 Olea europaea HOM05D005391 ORTHO05D006694 1.3e-06 57.4 129 38.0
Pp3c7_3280 Physcomitrium patens HOM05D005391 ORTHO05D006694 2.3e-06 56.6 175 34.3
Nitab4.5_0001362g0010 Nicotiana tabacum HOM05D005391 ORTHO05D006694 3.9e-06 55.8 166 32.5


User provided reference genes

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