Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN23G0784 Fragaria x ananassa HOM05D008067 ORTHO05D010226 3.1e-41 171.4 87 100.0
FvH4_1g04950 Fragaria vesca HOM05D008067 ORTHO05D010226 4.4e-40 167.5 87 97.7
FAN28G1234 Fragaria x ananassa HOM05D008067 ORTHO05D010226 7.8e-37 156.8 88 92.0
RcHm_v2.0_Chr2g0090561 Rosa chinensis HOM05D008067 ORTHO05D010226 4.6e-29 131.0 89 80.9
MD02G1048100 Malus domestica HOM05D008067 ORTHO05D010226 1.1e-17 93.2 89 68.5
Prupe.7G230000 Prunus persica HOM05D008067 ORTHO05D010226 7.6e-16 87.0 87 67.8
COL.COLO4_34910 Corchorus olitorius HOM05D008067 ORTHO05D010226 3.8e-15 84.7 87 62.1
Thecc.09G111500 Theobroma cacao HOM05D008067 ORTHO05D010226 3.2e-14 81.6 82 63.4
Gohir.A07G006600 Gossypium hirsutum HOM05D008067 ORTHO05D010226 1.2e-13 79.7 83 60.2
Gohir.D07G005400 Gossypium hirsutum HOM05D008067 ORTHO05D010226 1.2e-13 79.7 85 60.0
Gorai.001G004900 Gossypium raimondii HOM05D008067 ORTHO05D010226 1.2e-13 79.7 85 60.0
Gohir.D06G060201 Gossypium hirsutum HOM05D008067 ORTHO05D010226 4.6e-13 77.8 83 60.2
Gorai.010G070100 Gossypium raimondii HOM05D008067 ORTHO05D010226 7.8e-13 77.0 83 55.4
TAR624G0725 Trochodendron aralioides HOM05D008067 ORTHO05D010226 1.3e-12 76.3 76 60.5
Cfa003263 Carpinus fangiana HOM05D008067 ORTHO05D010226 1.7e-12 75.9 83 59.0
Atru.chr7.1341 Acer truncatum HOM05D008067 ORTHO05D010226 2.3e-12 75.5 87 59.8
ClCG11G002490 Citrullus lanatus HOM05D008067 ORTHO05D010226 6.6e-12 73.9 67 62.7
CSS0009961 Camellia sinensis var. sinensis HOM05D008067 ORTHO05D010226 8.7e-12 73.6 75 62.7
CSS0037112 Camellia sinensis var. sinensis HOM05D008067 ORTHO05D010226 8.7e-12 73.6 75 62.7
Haze_25708 Corylus avellana HOM05D008067 ORTHO05D010226 8.7e-12 73.6 83 57.8
Gohir.A06G061900 Gossypium hirsutum HOM05D008067 ORTHO05D010226 8.7e-12 73.6 62 62.9
Sed0011788 Sechium edule HOM05D008067 ORTHO05D010226 1.1e-11 73.2 68 61.8
QL02p085507 Quercus lobata HOM05D008067 ORTHO05D010226 1.9e-11 72.4 83 61.4
Aqoxy7G01692 Aquilegia oxysepala HOM05D008067 ORTHO05D010226 3.3e-11 71.6 76 57.9
Sed0012648 Sechium edule HOM05D008067 ORTHO05D010226 5.6e-11 70.9 81 53.1
CsaV3_2G002290 Cucumis sativus L. HOM05D008067 ORTHO05D010226 9.6e-11 70.1 81 54.3
MELO3C004555.2 Cucumis melo HOM05D008067 ORTHO05D010226 1.6e-10 69.3 81 54.3
EL10Ac8g18505 Beta vulgaris HOM05D008067 ORTHO05D010226 2.1e-10 68.9 71 50.7
Peaxi162Scf00560g00114 Petunia axillaris HOM05D008067 ORTHO05D010226 2.8e-10 68.6 86 46.5
HPP92_010803 Vanilla planifolia HOM05D008067 ORTHO05D010226 2.8e-10 68.6 71 56.3
Manes.03G019700 Manihot esculenta HOM05D008067 ORTHO05D010226 3.6e-10 68.2 85 57.6
CiPaw.04G164800 Carya illinoinensis HOM05D008067 ORTHO05D010226 4.8e-10 67.8 77 58.4
Psat1g041240 Pisum sativum HOM05D008067 ORTHO05D010226 6.2e-10 67.4 79 53.2
Ah.09g227900 Amaranthus hybridus HOM05D008067 ORTHO05D010226 1.1e-09 66.6 55 65.5
Nitab4.5_0003537g0010 Nicotiana tabacum HOM05D008067 ORTHO05D010226 1.8e-09 65.9 86 51.2
Potri.018G079200 Populus trichocarpa HOM05D008067 ORTHO05D010226 2.4e-09 65.5 84 56.0
DCAR_028716 Daucus carota HOM05D008067 ORTHO05D010226 3.1e-09 65.1 63 55.6
Medtr8g083450 Medicago truncatula HOM05D008067 ORTHO05D010226 6.9e-09 63.9 67 58.2
Ciclev10010044m.g Citrus clementina HOM05D008067 ORTHO05D010226 9.0e-09 63.5 85 54.1
Glyma.07G086900 Glycine max HOM05D008067 ORTHO05D010226 9.0e-09 63.5 72 56.9
SHI02746 Sapria himalayana HOM05D008067 ORTHO05D010226 9.0e-09 63.5 61 57.4
TPR.G35272 Trifolium pratense HOM05D003111 ORTHO05D003502 9.0e-09 63.5 75 53.3
Lalb_Chr22g0352831 Lupinus albus HOM05D008067 ORTHO05D010226 1.2e-08 63.2 79 53.2
TPR.G21702 Trifolium pratense HOM05D008067 ORTHO05D010226 1.2e-08 63.2 80 55.0
CiPaw.03G232800 Carya illinoinensis HOM05D008067 ORTHO05D010226 1.5e-08 62.8 85 50.6
Lj2g0006280 Lotus japonicus HOM05D008067 ORTHO05D010226 1.5e-08 62.8 86 47.7
PGSC0003DMG400000315 Solanum tuberosum HOM05D008067 ORTHO05D010226 1.5e-08 62.8 81 48.1
Nn8g39208 Nelumbo nucifera HOM05D008067 ORTHO05D010226 2.6e-08 62.0 68 55.9
RhsimUnG0085400 Rhododendron simsii HOM05D008067 ORTHO05D010226 2.6e-08 62.0 74 51.4
Solyc12g007060.1 Solanum lycopersicum HOM05D008067 ORTHO05D010226 3.4e-08 61.6 69 46.4
Sopen12g003050 Solanum pennellii HOM05D008067 ORTHO05D010226 3.4e-08 61.6 69 46.4
Glyma.09G190000 Glycine max HOM05D008067 ORTHO05D010226 4.4e-08 61.2 74 56.8
Medtr6g086485 Medicago truncatula HOM05D008067 ORTHO05D010226 4.4e-08 61.2 83 45.8
Nn2g11761 Nelumbo nucifera HOM05D008067 ORTHO05D010226 4.4e-08 61.2 67 52.2
Lsat_1_v5_gn_8_95580 Lactuca sativa HOM05D008067 ORTHO05D010226 5.8e-08 60.8 54 61.1
TPR.G23486 Trifolium pratense HOM05D008067 ORTHO05D010226 5.8e-08 60.8 71 57.7
Phvul.004G162800 Phaseolus vulgaris HOM05D008067 ORTHO05D010226 1.3e-07 59.7 77 49.4
Psat7g013560 Pisum sativum HOM05D008067 ORTHO05D010226 1.3e-07 59.7 68 54.4
Lj2g0025160 Lotus japonicus HOM05D008067 ORTHO05D010226 4.9e-07 57.8 74 48.6
Glyma.08G039000 Glycine max HOM05D008067 ORTHO05D010226 6.4e-07 57.4 72 48.6
Lj2g0022306 Lotus japonicus HOM05D008067 ORTHO05D010226 1.4e-06 56.2 69 50.7
Lalb_Chr05g0222841 Lupinus albus HOM05D008067 ORTHO05D010226 1.9e-06 55.8 74 48.6
Glyma.05G231500 Glycine max HOM05D008067 ORTHO05D010226 2.4e-06 55.5 70 48.6
Lj4g0026171 Lotus japonicus HOM05D008067 ORTHO05D010226 3.2e-06 55.1 55 52.7
Phvul.002G313700 Phaseolus vulgaris HOM05D008067 ORTHO05D010226 4.2e-06 54.7 36 72.2
CsaV3_1G030530 Cucumis sativus L. HOM05D008067 ORTHO05D010226 5.4e-06 54.3 80 48.8
Lj2g0013738 Lotus japonicus HOM05D008067 ORTHO05D010226 7.1e-06 53.9 68 52.9
Peaxi162Scf00546g00115 Petunia axillaris HOM05D008067 ORTHO05D010226 9.3e-06 53.5 71 53.5


User provided reference genes

Program Settings