Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN23G0579 Fragaria x ananassa HOM05D003970 ORTHO05D004615 7.4e-215 750.4 406 100.0
FAN26G2539 Fragaria x ananassa HOM05D003970 ORTHO05D004615 1.6e-209 732.6 404 97.8
FAN28G0363 Fragaria x ananassa HOM05D003970 ORTHO05D004615 3.6e-209 731.5 406 97.5
FvH4_1g08120 Fragaria vesca HOM05D003970 ORTHO05D004615 4.7e-209 731.1 406 95.1
FAN26G0968 Fragaria x ananassa HOM05D003970 ORTHO05D004615 1.4e-208 729.6 406 97.5
FAN19G1405 Fragaria x ananassa HOM05D003970 ORTHO05D004615 8.8e-208 726.9 406 94.8
RcHm_v2.0_Chr2g0094171 Rosa chinensis HOM05D003970 ORTHO05D004615 1.4e-192 676.4 392 93.4
Prupe.7G204000 Prunus persica HOM05D003970 ORTHO05D004615 2.2e-174 615.9 393 84.5
MD15G1212900 Malus domestica HOM05D003970 ORTHO05D004615 6.4e-174 614.4 401 83.0
MD02G1085700 Malus domestica HOM05D003970 ORTHO05D004615 1.8e-173 612.8 401 83.5
CiPaw.04G146900 Carya illinoinensis HOM05D003970 ORTHO05D004615 1.2e-167 593.6 358 87.2
TWI32G0099 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 9.8e-167 590.5 373 83.9
CANSAT56G0340 Cannabis sativa HOM05D003970 ORTHO05D004615 1.3e-166 590.1 392 79.6
Lj7A681T64 Lonicera japonica HOM05D003970 ORTHO05D004615 1.9e-165 586.3 352 86.9
QL02p061312 Quercus lobata HOM05D003970 ORTHO05D004615 7.8e-164 580.9 352 86.1
QL02p061443 Quercus lobata HOM05D003970 ORTHO05D004615 7.8e-164 580.9 352 86.1
Duzib168G1513 Durio zibethinus HOM05D003970 ORTHO05D004615 1.3e-163 580.1 362 83.7
MSTRG.26453 Avicennia marina HOM05D003970 ORTHO05D004615 3.9e-163 578.6 367 83.7
Dinv36802 Davidia involucrata HOM05D003970 ORTHO05D004615 3.9e-163 578.6 366 83.3
SGA_v2.0_scaffold23G10060 Striga asiatica HOM05D003970 ORTHO05D004615 1.1e-162 577.0 376 80.9
Oeu035943.1 Olea europaea HOM05D003970 ORTHO05D004615 3.3e-162 575.5 373 81.0
Ciclev10020772m.g Citrus clementina HOM05D003970 ORTHO05D004615 5.6e-162 574.7 356 85.1
Lsat_1_v5_gn_5_142140 Lactuca sativa HOM05D003970 ORTHO05D004615 7.3e-162 574.3 358 78.8
Ciclev10010674m.g Citrus clementina HOM05D003970 ORTHO05D004615 9.5e-162 573.9 364 83.5
Thecc.09G082200 Theobroma cacao HOM05D003970 ORTHO05D004615 2.1e-161 572.8 359 83.3
TWI34G1861 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 4.7e-161 571.6 368 82.6
Gohir.D13G197900 Gossypium hirsutum HOM05D003970 ORTHO05D004615 6.2e-161 571.2 369 80.8
SalBow1G5979 Salvia bowleyana HOM05D003970 ORTHO05D004615 1.1e-160 570.5 360 82.5
Gorai.013G226600 Gossypium raimondii HOM05D003970 ORTHO05D004615 1.4e-160 570.1 369 80.8
DCAR_028283 Daucus carota HOM05D003970 ORTHO05D004615 2.3e-160 569.3 356 84.3
Actinidia29916 Actinidia chinensis HOM05D003970 ORTHO05D004615 3.1e-160 568.9 360 79.2
Thhalv10003454m.g Eutrema salsugineum HOM05D003970 ORTHO05D004615 3.1e-160 568.9 363 82.9
Carub.0007s3126 Capsella rubella HOM05D003970 ORTHO05D004615 4.0e-160 568.5 373 81.8
Gohir.A13G192500 Gossypium hirsutum HOM05D003970 ORTHO05D004615 4.0e-160 568.5 359 82.2
THA.LOC104808900 Tarenaya hassleriana HOM05D003970 ORTHO05D004615 5.2e-160 568.2 356 83.7
Sc18g0002350 Simmondsia chinensis HOM05D003970 ORTHO05D004615 1.2e-159 567.0 344 80.8
Migut.L01537 Erythranthe guttata HOM05D003970 ORTHO05D004615 1.5e-159 566.6 360 82.2
Eucgr.C03403 Eucalyptus grandis HOM05D003970 ORTHO05D004615 1.5e-159 566.6 376 74.5
Sp7g06850 Schrenkiella parvula HOM05D003970 ORTHO05D004615 1.5e-159 566.6 359 83.3
TAR623G1298 Trochodendron aralioides HOM05D003970 ORTHO05D004615 1.5e-159 566.6 364 78.0
AT5G35460 Arabidopsis thaliana HOM05D003970 ORTHO05D004615 2.0e-159 566.2 358 83.5
Cfa003038 Carpinus fangiana HOM05D003970 ORTHO05D004615 2.6e-159 565.8 352 84.9
Aqoxy7G03992 Aquilegia oxysepala HOM05D003970 ORTHO05D004615 3.4e-159 565.5 369 79.4
ECA234G3560 Erigeron canadensis HOM05D003970 ORTHO05D004615 7.5e-159 564.3 374 76.2
Hma1.2p1_0672F.1_g200850 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 7.5e-159 564.3 372 79.0
A04p09740 Brassica napus HOM05D003970 ORTHO05D004615 9.9e-159 563.9 359 82.7
BraA04t16636Z Brassica rapa HOM05D003970 ORTHO05D004615 9.9e-159 563.9 359 82.7
AUR62029007 Chenopodium quinoa HOM05D003970 ORTHO05D004615 9.9e-159 563.9 369 76.7
HanXRQChr10g0319561 Helianthus annuus HOM05D003970 ORTHO05D004615 1.3e-158 563.5 373 75.1
CARHR217480 Cardamine hirsuta HOM05D003970 ORTHO05D004615 2.9e-158 562.4 362 82.3
TAR636G0030 Trochodendron aralioides HOM05D003970 ORTHO05D004615 2.9e-158 562.4 364 77.7
CsaV3_1G040740 Cucumis sativus L. HOM05D003970 ORTHO05D004615 3.7e-158 562.0 362 80.4
DCAR_024721 Daucus carota HOM05D003970 ORTHO05D004615 3.7e-158 562.0 368 80.2
AL7G44300 Arabidopsis lyrata HOM05D003970 ORTHO05D004615 4.9e-158 561.6 371 81.4
Migut.J00961 Erythranthe guttata HOM05D003970 ORTHO05D004615 6.4e-158 561.2 372 75.5
Peaxi162Scf00724g00210 Petunia axillaris HOM05D003970 ORTHO05D004615 6.4e-158 561.2 374 75.4
vmacro17169 Vaccinium macrocarpon HOM05D003970 ORTHO05D004615 6.4e-158 561.2 369 81.0
PSO210G0608 Papaver somniferum HOM05D003970 ORTHO05D004615 8.3e-158 560.8 368 81.8
Atru.chr7.1654 Acer truncatum HOM05D003970 ORTHO05D004615 1.9e-157 559.7 357 81.8
CSS0040908 Camellia sinensis var. sinensis HOM05D003970 ORTHO05D004615 1.9e-157 559.7 372 79.8
SGA_v2.0_scaffold21G09454 Striga asiatica HOM05D003970 ORTHO05D004615 1.9e-157 559.7 395 75.9
PSO210G0448 Papaver somniferum HOM05D003970 ORTHO05D004615 2.4e-157 559.3 335 86.9
Manes.16G098400 Manihot esculenta HOM05D003970 ORTHO05D004615 3.2e-157 558.9 374 80.2
Nitab4.5_0006849g0020 Nicotiana tabacum HOM05D003970 ORTHO05D004615 4.1e-157 558.5 406 70.7
Nn6g35566 Nelumbo nucifera HOM05D003970 ORTHO05D004615 1.2e-156 557.0 375 77.6
MELO3C015502.2 Cucumis melo HOM05D003970 ORTHO05D004615 3.5e-156 555.4 362 79.6
Potri.018G051100 Populus trichocarpa HOM05D003970 ORTHO05D004615 6.0e-156 554.7 374 79.9
AUR62025170 Chenopodium quinoa HOM05D003970 ORTHO05D004615 7.8e-156 554.3 369 75.9
Lj4g0010970 Lotus japonicus HOM05D003970 ORTHO05D004615 1.0e-155 553.9 352 79.0
VMungo1215G1067 Vigna mungo HOM05D003970 ORTHO05D004615 1.3e-155 553.5 361 77.0
Potri.006G145600 Populus trichocarpa HOM05D003970 ORTHO05D004615 1.7e-155 553.1 377 76.1
Rhsim05G0013300 Rhododendron simsii HOM05D003970 ORTHO05D004615 1.7e-155 553.1 373 79.4
C04p43240 Brassica napus HOM05D003970 ORTHO05D004615 2.3e-155 552.7 362 80.9
Phvul.003G133400 Phaseolus vulgaris HOM05D003970 ORTHO05D004615 3.9e-155 552.0 361 78.7
CAN.G33.23 Capsicum annuum HOM05D003970 ORTHO05D004615 5.1e-155 551.6 374 73.8
arahy.Tifrunner.gnm1.ann1.7IK41Y Arachis hypogaea HOM05D003970 ORTHO05D004615 8.6e-155 550.8 356 78.4
Glyma.17G051800 Glycine max HOM05D003970 ORTHO05D004615 8.6e-155 550.8 369 78.3
Solyc07g041160.3 Solanum lycopersicum HOM05D003970 ORTHO05D004615 8.6e-155 550.8 373 74.0
Glyma.13G107500 Glycine max HOM05D003970 ORTHO05D004615 1.1e-154 550.4 368 78.5
Sopen07g020420 Solanum pennellii HOM05D003970 ORTHO05D004615 1.1e-154 550.4 373 73.7
BcaB02g08054 Brassica carinata HOM05D003970 ORTHO05D004615 1.5e-154 550.1 368 80.2
PGSC0003DMG400020950 Solanum tuberosum HOM05D003970 ORTHO05D004615 1.5e-154 550.1 373 73.5
Nitab4.5_0001488g0140 Nicotiana tabacum HOM05D003970 ORTHO05D004615 1.9e-154 549.7 373 73.2
arahy.Tifrunner.gnm1.ann1.B9Q4RC Arachis hypogaea HOM05D003970 ORTHO05D004615 2.5e-154 549.3 356 78.7
BcaC02g09478 Brassica carinata HOM05D003970 ORTHO05D004615 5.6e-154 548.1 362 80.4
BolC4t25903H Brassica oleracea HOM05D003970 ORTHO05D004615 5.6e-154 548.1 362 80.4
Lj4A288T21 Lonicera japonica HOM05D003970 ORTHO05D004615 7.3e-154 547.7 344 80.8
CDE05G2698 Ceratophyllum demersum HOM05D003970 ORTHO05D004615 1.2e-153 547.0 351 78.6
Actinidia25226 Actinidia chinensis HOM05D003970 ORTHO05D004615 2.1e-153 546.2 360 80.3
Gohir.D06G073400 Gossypium hirsutum HOM05D003970 ORTHO05D004615 4.0e-152 542.0 343 81.3
Gorai.010G085700 Gossypium raimondii HOM05D003970 ORTHO05D004615 5.2e-152 541.6 343 81.3
Lalb_Chr08g0232451 Lupinus albus HOM05D003970 ORTHO05D004615 8.9e-152 540.8 366 75.4
Peaxi162Scf00219g00019 Petunia axillaris HOM05D003970 ORTHO05D004615 1.5e-151 540.0 390 70.0
Cc06_g11850 Coffea canephora HOM05D003970 ORTHO05D004615 3.4e-151 538.9 358 78.2
Sabra18G0047600 Salix brachista HOM05D003970 ORTHO05D004615 4.4e-151 538.5 384 76.3
Gohir.A06G074600 Gossypium hirsutum HOM05D003970 ORTHO05D004615 5.8e-151 538.1 343 81.0
Actinidia39693 Actinidia chinensis HOM05D003970 ORTHO05D004615 2.2e-150 536.2 375 77.1
Sed0004197 Sechium edule HOM05D003970 ORTHO05D004615 3.8e-150 535.4 362 77.1
EL10Ac8g19144 Beta vulgaris HOM05D003970 ORTHO05D004615 1.1e-149 533.9 369 78.0
MBI05_g23628_MAGBIO Magnolia biondii HOM05D003970 ORTHO05D004615 1.4e-149 533.5 327 84.1
PGR044G0734 Punica granatum HOM05D003970 ORTHO05D004615 9.2e-149 530.8 313 81.8
Lj6g0022796 Lotus japonicus HOM05D003970 ORTHO05D004615 1.2e-148 530.4 362 72.1
Sabra06G0115100 Salix brachista HOM05D003970 ORTHO05D004615 6.0e-148 528.1 369 77.8
Aa31sc339G40 Aethionema arabicum HOM05D003970 ORTHO05D004615 7.8e-148 527.7 368 74.5
VMungo1309G1594 Vigna mungo HOM05D003970 ORTHO05D004615 1.7e-147 526.6 335 77.3
Medtr2g040600 Medicago truncatula HOM05D003970 ORTHO05D004615 2.3e-147 526.2 356 74.2
Hund08710 Selenicereus undatus HOM05D003970 ORTHO05D004615 2.3e-147 526.2 359 77.2
Psat1g133240 Pisum sativum HOM05D003970 ORTHO05D004615 5.1e-147 525.0 353 74.5
Os01g0585100 Oryza sativa ssp. japonica HOM05D003970 ORTHO05D004615 6.6e-147 524.6 299 83.6
ClCG03G015300 Citrullus lanatus HOM05D003970 ORTHO05D004615 2.5e-146 522.7 452 64.8
vmacro06308 Vaccinium macrocarpon HOM05D003970 ORTHO05D004615 2.5e-146 522.7 340 79.1
Zm00001eb356980 Zea mays HOM05D003970 ORTHO05D004615 1.2e-145 520.4 299 82.9
Glyma.15G173000 Glycine max HOM05D003970 ORTHO05D004615 2.8e-145 519.2 365 70.7
Ca_13142_v3 Cicer arietinum L. HOM05D003970 ORTHO05D004615 4.7e-145 518.5 353 73.9
Phvul.009G229400 Phaseolus vulgaris HOM05D003970 ORTHO05D004615 4.7e-145 518.5 333 76.6
Glyma.09G067100 Glycine max HOM05D003970 ORTHO05D004615 1.8e-144 516.5 333 75.7
Medtr4g125680 Medicago truncatula HOM05D003970 ORTHO05D004615 7.6e-143 511.1 313 79.9
ECA236G0065 Erigeron canadensis HOM05D003970 ORTHO05D004615 1.3e-142 510.4 366 70.5
HanXRQChr04g0126061 Helianthus annuus HOM05D003970 ORTHO05D004615 1.3e-142 510.4 359 72.1
TPR.G9462 Trifolium pratense HOM05D003970 ORTHO05D004615 6.0e-140 501.5 334 73.4
ATR0051G045 Amborella trichopoda HOM05D003970 ORTHO05D004615 3.3e-138 495.7 368 70.1
arahy.Tifrunner.gnm1.ann1.EC17FL Arachis hypogaea HOM05D003970 ORTHO05D004615 3.3e-138 495.7 373 68.1
TAR624G1217 Trochodendron aralioides HOM05D003970 ORTHO05D004615 4.3e-138 495.4 364 74.2
TPR.G18106 Trifolium pratense HOM05D003970 ORTHO05D004615 2.1e-137 493.0 286 82.9
BcaNung06959 Brassica carinata HOM05D003970 ORTHO05D004615 1.1e-136 490.7 313 84.7
Gohir.D13G197975 Gossypium hirsutum HOM05D003970 ORTHO05D004615 1.5e-135 486.9 303 83.8
GSVIVG01015145001 Vitis vinifera HOM05D003970 ORTHO05D004615 3.8e-134 482.3 294 85.4
Lsat_1_v5_gn_8_86281 Lactuca sativa HOM05D003970 ORTHO05D004615 6.4e-134 481.5 395 65.1
Oeu000306.1 Olea europaea HOM05D003970 ORTHO05D004615 6.4e-134 481.5 359 72.7
HPP92_005531 Vanilla planifolia HOM05D003970 ORTHO05D004615 4.2e-133 478.8 344 73.3
Hma1.2p1_0169F.1_g074770 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 2.1e-132 476.5 349 73.1
Duzib150G0174 Durio zibethinus HOM05D003970 ORTHO05D004615 2.3e-131 473.0 359 72.1
Haze_25957 Corylus avellana HOM05D003970 ORTHO05D004615 1.1e-130 470.7 365 69.3
BcaB06g26940 Brassica carinata HOM05D003970 ORTHO05D004615 3.7e-129 465.7 310 76.1
Zm00001eb160510 Zea mays HOM05D003970 ORTHO05D004615 5.3e-128 461.8 264 83.7
unitig_26.g9177 Utricularia gibba HOM05D003970 ORTHO05D004615 6.4e-126 454.9 298 71.5
Mapoly0061s0008 Marchantia polymorpha HOM05D003970 ORTHO05D004615 7.1e-125 451.4 350 62.3
SMO169G0099 Selaginella moellendorffii HOM05D003970 ORTHO05D004615 2.2e-118 429.9 304 66.4
Rhsim03G0230700 Rhododendron simsii HOM05D003970 ORTHO05D004615 4.9e-118 428.7 351 66.1
Pp3c3_9180 Physcomitrium patens HOM05D003970 ORTHO05D004615 8.4e-118 427.9 333 61.0
CDE05G3050 Ceratophyllum demersum HOM05D003970 ORTHO05D004615 5.5e-117 425.2 266 78.9
Ah.14g085030 Amaranthus hybridus HOM05D003970 ORTHO05D004615 1.2e-116 424.1 359 62.1
Pp3c2_27340 Physcomitrium patens HOM05D003970 ORTHO05D004615 2.1e-116 423.3 345 60.6
AagrBONN_evm.TU.Sc2ySwM_340.231 Anthoceros agrestis HOM05D003970 ORTHO05D004615 1.8e-115 420.2 300 66.3
SMO271G0136 Selaginella moellendorffii HOM05D003970 ORTHO05D004615 1.4e-112 410.6 306 64.1
CSS0012417 Camellia sinensis var. sinensis HOM05D003970 ORTHO05D004615 1.1e-109 401.0 355 65.6
Cpa.g.sc28.103 Carica papaya HOM05D003970 ORTHO05D004615 2.7e-108 396.4 221 87.3
arahy.Tifrunner.gnm1.ann1.I25TD2 Arachis hypogaea HOM05D003970 ORTHO05D004615 3.0e-107 392.9 433 52.2
PGSC0003DMG400019544 Solanum tuberosum HOM05D003970 ORTHO05D004615 8.5e-102 374.8 233 79.8
CBR_g16039 Chara braunii HOM05D003970 ORTHO05D004615 6.1e-92 342.0 299 56.5
AagrBONN_evm.TU.Sc2ySwM_340.377 Anthoceros agrestis HOM05D003970 ORTHO05D004615 2.2e-86 323.6 211 70.1
PSO017G0759 Papaver somniferum HOM05D003970 ORTHO05D004615 1.5e-82 310.8 205 79.0
RcHm_v2.0_Chr1g0313941 Rosa chinensis HOM05D003970 ORTHO05D004615 2.0e-74 283.9 150 92.7
Ah.09g231260 Amaranthus hybridus HOM05D003970 ORTHO05D004615 1.1e-64 251.5 361 46.3
Cc02_g26660 Coffea canephora HOM05D003970 ORTHO05D004615 2.6e-58 230.3 170 72.9
SEGI_24858 Sequoiadendron giganteum HOM05D003970 ORTHO05D004615 1.1e-56 224.9 178 60.7
Medtr2g039830 Medicago truncatula HOM05D003970 ORTHO05D004615 2.3e-43 180.6 164 58.5
Zm00001eb362060 Zea mays HOM05D003970 ORTHO05D004615 1.3e-33 148.3 89 82.0
Cre03.g207351 Chlamydomonas reinhardtii HOM05D003970 ORTHO05D004615 1.3e-28 131.7 299 30.4
Medtr2g039840 Medicago truncatula HOM05D003970 ORTHO05D004615 1.4e-27 128.3 103 63.1
MCO07G676 Micromonas commoda HOM05D003970 ORTHO05D004615 2.9e-25 120.6 331 28.4
TPR.G277 Trifolium pratense HOM05D003970 ORTHO05D004615 5.1e-22 109.8 65 76.9
PRCOL_00002316 Prasinoderma coloniale HOM05D003970 ORTHO05D004615 8.7e-22 109.0 283 28.6
COL.COLO4_18144 Corchorus olitorius HOM05D003970 ORTHO05D004615 2.1e-20 104.4 95 80.0
Nitab4.5_0003493g0050 Nicotiana tabacum HOM05D003970 ORTHO05D004615 1.4e-19 101.7 246 34.6
Cpa.g.sc28.102 Carica papaya HOM05D003970 ORTHO05D004615 1.8e-19 101.3 76 86.8
Zm00001eb242980 Zea mays HOM05D003970 ORTHO05D004615 6.9e-19 99.4 61 80.3
Zm00001eb304220 Zea mays HOM05D003970 ORTHO05D004615 6.9e-19 99.4 61 80.3
Zm00001eb122080 Zea mays HOM05D003970 ORTHO05D004615 1.5e-18 98.2 61 80.3
Cre14.g620200 Chlamydomonas reinhardtii HOM05D003970 ORTHO05D004615 5.8e-18 96.3 377 25.7
Medtr1g008180 Medicago truncatula HOM05D003970 ORTHO05D004615 9.3e-16 89.0 59 72.9
COL.COLO4_18145 Corchorus olitorius HOM05D003970 ORTHO05D004615 4.6e-15 86.7 61 75.4
Cfa024865 Carpinus fangiana HOM05D003970 ORTHO05D124560 4.0e-11 73.6 108 35.2
RcHm_v2.0_Chr1g0340041 Rosa chinensis HOM05D003970 ORTHO05D004615 1.0e-09 68.9 33 97.0
Cpa.g.c48203 Carica papaya HOM05D003970 ORTHO05D004615 1.9e-08 64.7 58 84.5
Zm00001eb043210 Zea mays HOM05D008270 ORTHO05D010684 1.2e-07 62.0 41 73.2
Zm00001eb198340 Zea mays HOM05D003970 ORTHO05D004615 2.1e-07 61.2 41 70.7
Zm00001eb372010 Zea mays HOM05D008270 ORTHO05D010684 3.5e-07 60.5 39 74.4
QL02p061328 Quercus lobata HOM05D000001 ORTHO05D000003 1.8e-06 58.2 49 59.2


User provided reference genes

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