Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN23G0510 Fragaria x ananassa HOM05D005692 ORTHO05D006953 5.0e-105 384.4 191 100.0
FAN26G1568 Fragaria x ananassa HOM05D005692 ORTHO05D006953 4.7e-87 324.7 293 62.8
FAN19G0937 Fragaria x ananassa HOM05D005692 ORTHO05D006953 2.6e-77 292.4 285 60.0
COL.COLO4_18212 Corchorus olitorius HOM05D005692 ORTHO05D006953 4.3e-48 195.3 302 41.1
FvH4_1g07240 Fragaria vesca HOM05D005692 ORTHO05D006953 3.7e-47 192.2 90 97.8
FAN26G0193 Fragaria x ananassa HOM05D005692 ORTHO05D006953 3.7e-47 192.2 90 97.8
RcHm_v2.0_Chr2g0093151 Rosa chinensis HOM05D005692 ORTHO05D006953 4.1e-46 188.7 90 95.6
FAN19G2784 Fragaria x ananassa HOM05D005692 ORTHO05D006953 6.9e-46 188.0 90 94.4
Sed0014309 Sechium edule HOM05D005692 ORTHO05D006953 1.2e-45 187.2 300 40.3
FvH4_1g24820 Fragaria vesca HOM05D005692 ORTHO05D006953 3.8e-44 182.2 90 92.2
MD02G1077000 Malus domestica HOM05D005692 ORTHO05D006953 7.2e-43 177.9 90 87.8
Prupe.7G211400 Prunus persica HOM05D005692 ORTHO05D006953 6.1e-42 174.9 90 85.6
MD15G1205700 Malus domestica HOM05D005692 ORTHO05D006953 7.9e-42 174.5 90 86.7
Ah.09g223860 Amaranthus hybridus HOM05D005692 ORTHO05D006953 1.1e-40 170.6 90 83.3
Thecc.09G090700 Theobroma cacao HOM05D005692 ORTHO05D006953 1.1e-40 170.6 91 82.4
Manes.03G032800 Manihot esculenta HOM05D005692 ORTHO05D006953 1.9e-40 169.9 90 83.3
Gohir.A02G019200 Gossypium hirsutum HOM05D005692 ORTHO05D006953 2.5e-40 169.5 91 82.4
Gohir.D02G022500 Gossypium hirsutum HOM05D005692 ORTHO05D006953 2.5e-40 169.5 91 82.4
Gorai.005G027900 Gossypium raimondii HOM05D005692 ORTHO05D006953 2.5e-40 169.5 91 82.4
Potri.012G001800 Populus trichocarpa HOM05D005692 ORTHO05D006953 2.5e-40 169.5 89 84.3
Sabra12G0019500 Salix brachista HOM05D005692 ORTHO05D006953 2.5e-40 169.5 89 84.3
Sabra12G0019700 Salix brachista HOM05D005692 ORTHO05D006953 2.5e-40 169.5 89 84.3
Duzib151G0847 Durio zibethinus HOM05D005692 ORTHO05D006953 3.3e-40 169.1 91 81.3
AUR62039390 Chenopodium quinoa HOM05D005692 ORTHO05D006953 4.3e-40 168.7 90 82.2
ClCG03G015670 Citrullus lanatus HOM05D005692 ORTHO05D006953 5.7e-40 168.3 90 83.3
vmacro06285 Vaccinium macrocarpon HOM05D005692 ORTHO05D006953 5.7e-40 168.3 91 80.2
vmacro23428 Vaccinium macrocarpon HOM05D005692 ORTHO05D006953 5.7e-40 168.3 91 80.2
Cfa003097 Carpinus fangiana HOM05D005692 ORTHO05D006953 7.4e-40 167.9 90 82.2
CSS0005546 Camellia sinensis var. sinensis HOM05D005692 ORTHO05D006953 9.7e-40 167.5 90 82.2
CSS0025569 Camellia sinensis var. sinensis HOM05D005692 ORTHO05D006953 9.7e-40 167.5 90 82.2
Dinv36757 Davidia involucrata HOM05D005692 ORTHO05D006953 9.7e-40 167.5 91 80.2
Nitab4.5_0000540g0260 Nicotiana tabacum HOM05D005692 ORTHO05D006953 9.7e-40 167.5 91 80.2
Nitab4.5_0009931g0010 Nicotiana tabacum HOM05D005692 ORTHO05D006953 9.7e-40 167.5 91 80.2
TWI34G0948 Tripterygium wilfordii HOM05D005692 ORTHO05D006953 9.7e-40 167.5 90 81.1
Ciclev10010392m.g Citrus clementina HOM05D005692 ORTHO05D006953 1.6e-39 166.8 91 79.1
Glyma.18G151700 Glycine max HOM05D005692 ORTHO05D006953 1.6e-39 166.8 96 76.0
CANSAT78G0210 Cannabis sativa HOM05D005692 ORTHO05D006953 2.2e-39 166.4 90 80.0
Sopen12g003750 Solanum pennellii HOM05D005692 ORTHO05D006953 2.2e-39 166.4 91 79.1
Glyma.08G343600 Glycine max HOM05D005692 ORTHO05D006953 2.8e-39 166.0 92 78.3
Hund14283 Selenicereus undatus HOM05D005692 ORTHO05D006953 2.8e-39 166.0 91 80.2
EL10Ac2g04637 Beta vulgaris HOM05D005692 ORTHO05D006953 3.7e-39 165.6 90 80.0
Peaxi162Scf00015g00716 Petunia axillaris HOM05D005692 ORTHO05D006953 3.7e-39 165.6 91 79.1
PGSC0003DMG400000281 Solanum tuberosum HOM05D005692 ORTHO05D006953 3.7e-39 165.6 91 78.0
Ah.10g037300 Amaranthus hybridus HOM05D005692 ORTHO05D006953 4.8e-39 165.2 90 81.1
Solyc12g008810.2 Solanum lycopersicum HOM05D005692 ORTHO05D006953 4.8e-39 165.2 91 78.0
Atru.BG.21.p Acer truncatum HOM05D005692 ORTHO05D006953 6.3e-39 164.9 89 80.9
MELO3C015461.2 Cucumis melo HOM05D005692 ORTHO05D006953 6.3e-39 164.9 90 78.9
Sc14g0000750 Simmondsia chinensis HOM05D005692 ORTHO05D006953 8.2e-39 164.5 90 78.9
Nn8g38892 Nelumbo nucifera HOM05D005692 ORTHO05D006953 1.1e-38 164.1 91 79.1
CsaV3_1G040340 Cucumis sativus L. HOM05D005692 ORTHO05D006953 1.4e-38 163.7 90 78.9
PGR102G3100 Punica granatum HOM05D005692 ORTHO05D006953 1.4e-38 163.7 91 76.9
CiPaw.03G217300 Carya illinoinensis HOM05D005692 ORTHO05D006953 1.8e-38 163.3 91 76.9
CAN.G1241.20 Capsicum annuum HOM05D005692 ORTHO05D006953 2.4e-38 162.9 91 74.7
Cpa.g.sc20.158 Carica papaya HOM05D005692 ORTHO05D006953 2.4e-38 162.9 90 81.1
Nn6g35447 Nelumbo nucifera HOM05D005692 ORTHO05D006953 2.4e-38 162.9 91 79.1
TAR626G0225 Trochodendron aralioides HOM05D005692 ORTHO05D006953 2.4e-38 162.9 89 79.8
Eucgr.C03889 Eucalyptus grandis HOM05D005692 ORTHO05D006953 3.1e-38 162.5 90 80.0
Nitab4.5_0003152g0130 Nicotiana tabacum HOM05D005692 ORTHO05D006953 3.1e-38 162.5 91 79.1
Cc06_g11300 Coffea canephora HOM05D005692 ORTHO05D006953 5.3e-38 161.8 90 78.9
Oeu039606.1 Olea europaea HOM05D005692 ORTHO05D006953 5.3e-38 161.8 90 77.8
Duzib187G1084 Durio zibethinus HOM05D005692 ORTHO05D006953 6.9e-38 161.4 91 74.7
HanXRQChr10g0319271 Helianthus annuus HOM05D005692 ORTHO05D006953 9.1e-38 161.0 90 75.6
Atru.BG.266.p Acer truncatum HOM05D005692 ORTHO05D006953 1.2e-37 160.6 89 78.7
Rhsim03G0233100 Rhododendron simsii HOM05D005692 ORTHO05D006953 1.2e-37 160.6 91 75.8
Migut.J00600 Erythranthe guttata HOM05D005692 ORTHO05D006953 1.5e-37 160.2 91 76.9
Migut.J01065 Erythranthe guttata HOM05D005692 ORTHO05D006953 1.5e-37 160.2 91 76.9
Psat6g162800 Pisum sativum HOM05D005692 ORTHO05D006953 2.0e-37 159.8 90 76.7
arahy.Tifrunner.gnm1.ann1.JM0M9B Arachis hypogaea HOM05D005692 ORTHO05D006953 2.6e-37 159.5 91 76.9
arahy.Tifrunner.gnm1.ann1.VY1HWT Arachis hypogaea HOM05D005692 ORTHO05D006953 2.6e-37 159.5 91 76.9
ECA234G3968 Erigeron canadensis HOM05D005692 ORTHO05D006953 3.4e-37 159.1 90 74.4
Ca_07409_v3 Cicer arietinum L. HOM05D005692 ORTHO05D006953 5.9e-37 158.3 90 77.8
Psat6g183720 Pisum sativum HOM05D005692 ORTHO05D006953 7.7e-37 157.9 90 75.6
DCAR_011984 Daucus carota HOM05D005692 ORTHO05D006953 1.0e-36 157.5 91 71.4
Phvul.008G136000 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 1.0e-36 157.5 91 74.7
Lsat_1_v5_gn_5_145440 Lactuca sativa HOM05D005692 ORTHO05D006953 1.3e-36 157.1 90 72.2
SGA_v2.0_scaffold62G21600 Striga asiatica HOM05D005692 ORTHO05D006953 1.3e-36 157.1 90 75.6
Lalb_Chr03g0041061 Lupinus albus HOM05D005692 ORTHO05D006953 1.7e-36 156.8 90 72.2
Medtr7g051450 Medicago truncatula HOM05D005692 ORTHO05D006953 1.7e-36 156.8 89 75.3
Phvul.005G056600 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 1.7e-36 156.8 91 73.6
HanXRQChr12g0354791 Helianthus annuus HOM05D005692 ORTHO05D006953 2.9e-36 156.0 90 73.3
Duzib187G0878 Durio zibethinus HOM05D005692 ORTHO05D006953 3.8e-36 155.6 91 75.8
Migut.H00760 Erythranthe guttata HOM05D005692 ORTHO05D006953 3.8e-36 155.6 91 74.7
AUR62033506 Chenopodium quinoa HOM05D005692 ORTHO05D006953 5.0e-36 155.2 110 66.4
Medtr7g021900 Medicago truncatula HOM05D005692 ORTHO05D006953 5.0e-36 155.2 89 75.3
SGA_v2.0_scaffold852G53671 Striga asiatica HOM05D005692 ORTHO05D006953 8.5e-36 154.5 90 74.4
THA.LOC104801884 Tarenaya hassleriana HOM05D005692 ORTHO05D006953 8.5e-36 154.5 90 75.6
Lj1g0023726 Lotus japonicus HOM05D005692 ORTHO05D006953 1.1e-35 154.1 91 72.5
Phvul.008G136200 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 1.1e-35 154.1 91 73.6
Psat6g183640 Pisum sativum HOM05D005692 ORTHO05D006953 1.1e-35 154.1 90 74.4
TWI32G0831 Tripterygium wilfordii HOM05D005692 ORTHO05D006953 1.4e-35 153.7 90 76.7
SGA_v2.0_scaffold33G13431 Striga asiatica HOM05D005692 ORTHO05D006953 1.9e-35 153.3 94 72.3
Actinidia29885 Actinidia chinensis HOM05D003753 ORTHO05D005081 4.2e-35 152.1 89 71.9
FAN26G0844 Fragaria x ananassa HOM05D000490 ORTHO05D000785 5.5e-35 151.8 84 95.2
GSVIVG01015215001 Vitis vinifera HOM05D005692 ORTHO05D006953 5.5e-35 151.8 91 71.4
Migut.H01159 Erythranthe guttata HOM05D005692 ORTHO05D006953 7.2e-35 151.4 91 72.5
MBI13_g44212_MAGBIO Magnolia biondii HOM05D005692 ORTHO05D006953 9.4e-35 151.0 91 70.3
MBI14_g41836_MAGBIO Magnolia biondii HOM05D005692 ORTHO05D006953 9.4e-35 151.0 91 70.3
PSO210G0626 Papaver somniferum HOM05D005692 ORTHO05D006953 9.4e-35 151.0 89 70.8
PSO210G2337 Papaver somniferum HOM05D005692 ORTHO05D006953 9.4e-35 151.0 89 70.8
HPP92_009139 Vanilla planifolia HOM05D005692 ORTHO05D006953 9.4e-35 151.0 91 71.4
Psat6g183440 Pisum sativum HOM05D005692 ORTHO05D006953 3.6e-34 149.1 90 73.3
SHI00379 Sapria himalayana HOM05D005692 ORTHO05D006953 4.6e-34 148.7 78 80.8
VMungo1383G2743 Vigna mungo HOM05D005692 ORTHO05D006953 6.1e-34 148.3 113 61.9
unitig_748.g8121 Utricularia gibba HOM05D005692 ORTHO05D006953 5.1e-33 145.2 90 70.0
ATR0602G199 Amborella trichopoda HOM05D005692 ORTHO05D006953 2.6e-32 142.9 89 70.8
Aa31LG2G20910 Aethionema arabicum HOM05D005692 ORTHO05D006953 3.3e-32 142.5 90 68.9
CARHR237500 Cardamine hirsuta HOM05D005692 ORTHO05D006953 4.4e-32 142.1 90 68.9
BcaC09g51744 Brassica carinata HOM05D005692 ORTHO05D006953 5.7e-32 141.7 90 68.9
AL7G22650 Arabidopsis lyrata HOM05D005692 ORTHO05D006953 7.4e-32 141.4 88 69.3
AT4G29660 Arabidopsis thaliana HOM05D005692 ORTHO05D006953 7.4e-32 141.4 88 69.3
Carub.0007s1086 Capsella rubella HOM05D005692 ORTHO05D006953 7.4e-32 141.4 88 69.3
Thhalv10026646m.g Eutrema salsugineum HOM05D005692 ORTHO05D006953 7.4e-32 141.4 90 68.9
FAN28G1732 Fragaria x ananassa HOM05D000490 ORTHO05D000785 9.7e-32 141.0 82 91.5
Aqoxy4G03142 Aquilegia oxysepala HOM05D005692 ORTHO05D006953 1.3e-31 140.6 86 67.4
BcaC09g52211 Brassica carinata HOM05D005692 ORTHO05D006953 2.2e-31 139.8 88 68.2
A01p08470 Brassica napus HOM05D005692 ORTHO05D006953 2.2e-31 139.8 88 68.2
C01p09830 Brassica napus HOM05D005692 ORTHO05D006953 2.2e-31 139.8 88 68.2
BolC1t00945H Brassica oleracea HOM05D005692 ORTHO05D006953 2.2e-31 139.8 88 68.2
BraA01t00794Z Brassica rapa HOM05D005692 ORTHO05D006953 2.2e-31 139.8 88 68.2
Nitab4.5_0003079g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 3.7e-31 139.0 79 75.9
Sp7g27450 Schrenkiella parvula HOM05D005692 ORTHO05D006953 3.7e-31 139.0 88 69.3
Os05g0540200 Oryza sativa ssp. japonica HOM05D005692 ORTHO05D006953 4.8e-31 138.7 90 68.9
Peaxi162Scf00354g00223 Petunia axillaris HOM05D005692 ORTHO05D006953 4.8e-31 138.7 89 68.5
Sp3g29900 Schrenkiella parvula HOM05D005692 ORTHO05D006953 4.8e-31 138.7 88 70.5
Nitab4.5_0000095g0140 Nicotiana tabacum HOM05D005692 ORTHO05D006953 1.3e-28 130.6 102 59.8
Nitab4.5_0008958g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 2.2e-28 129.8 78 73.1
Nitab4.5_0004795g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 1.4e-27 127.1 80 70.0
Aqoxy1G00378 Aquilegia oxysepala HOM05D005692 ORTHO05D006953 3.6e-26 122.5 88 60.2
RcHm_v2.0_Chr2g0093141 Rosa chinensis HOM05D000490 ORTHO05D000785 4.7e-26 122.1 85 81.2
CDE06G0459 Ceratophyllum demersum HOM05D005692 ORTHO05D006953 7.9e-26 121.3 74 70.3
FAN19G3189 Fragaria x ananassa HOM05D005692 ORTHO05D006953 7.9e-26 121.3 61 91.8
Peaxi162Scf00498g00124 Petunia axillaris HOM05D005692 ORTHO05D006953 3.9e-25 119.0 67 77.6
SHI21206 Sapria himalayana HOM05D005692 ORTHO05D006953 4.4e-24 115.5 65 73.8
CDE06G1459 Ceratophyllum demersum HOM05D005692 ORTHO05D006953 2.4e-22 109.8 66 75.8
TPR.G24304 Trifolium pratense HOM05D005692 ORTHO05D006953 2.4e-22 109.8 72 68.1
Psat0s10921g0080 Pisum sativum HOM05D005692 ORTHO05D006953 7.7e-21 104.8 61 75.4
SGA_v2.0_scaffold33G13433 Striga asiatica HOM05D000524 ORTHO05D000381 1.0e-20 104.4 61 75.4
Prupe.7G211500 Prunus persica HOM05D000490 ORTHO05D000785 3.2e-19 99.4 86 66.3
MD15G1205600 Malus domestica HOM05D000490 ORTHO05D000785 1.4e-17 94.0 86 61.6
MD02G1076900 Malus domestica HOM05D000490 ORTHO05D000785 3.0e-17 92.8 84 60.7
QL02p062862 Quercus lobata HOM05D000490 ORTHO05D000785 4.4e-16 89.0 83 60.2
Mapoly0063s0096 Marchantia polymorpha HOM05D005692 ORTHO05D006953 3.1e-14 82.8 68 54.4
CBR_g36562 Chara braunii HOM05D005692 ORTHO05D006953 2.0e-13 80.1 70 48.6
Cfa003098 Carpinus fangiana HOM05D000490 ORTHO05D000785 3.8e-12 75.9 86 58.1
Zm00001eb294300 Zea mays HOM05D005692 ORTHO05D006953 4.2e-11 72.4 61 55.7
Duzib150G0900 Durio zibethinus HOM05D000490 ORTHO05D000785 5.5e-11 72.0 87 51.7
Lalb_Chr14g0375351 Lupinus albus HOM05D000490 ORTHO05D000785 1.6e-10 70.5 83 47.0
ClCG03G015680 Citrullus lanatus HOM05D000490 ORTHO05D000785 8.0e-10 68.2 83 45.8
Duzib187G1290 Durio zibethinus HOM05D000490 ORTHO05D000785 5.2e-09 65.5 87 49.4
Glyma.01G002800 Glycine max HOM05D000490 ORTHO05D000785 8.8e-09 64.7 83 43.4
Lalb_Chr22g0349711 Lupinus albus HOM05D000490 ORTHO05D000785 1.5e-08 63.9 83 45.8
TPR.G35491 Trifolium pratense HOM05D000490 ORTHO05D000785 2.6e-08 63.2 81 45.7
Glyma.07G129500 Glycine max HOM05D000490 ORTHO05D000785 3.4e-08 62.8 82 42.7
Psat1g050320 Pisum sativum HOM05D000490 ORTHO05D000785 4.4e-08 62.4 81 46.9
MELO3C015460.2 Cucumis melo HOM05D000490 ORTHO05D000785 5.7e-08 62.0 83 44.6
Gohir.D13G199266 Gossypium hirsutum HOM05D000490 ORTHO05D000785 5.7e-08 62.0 86 45.3
Haze_25902 Corylus avellana HOM05D001256 ORTHO05D001141 7.5e-08 61.6 35 71.4
Gohir.A13G193466 Gossypium hirsutum HOM05D000490 ORTHO05D000785 1.3e-07 60.8 87 47.1
Medtr6g092690 Medicago truncatula HOM05D000490 ORTHO05D000785 1.3e-07 60.8 82 41.5
Ca_25623_v3 Cicer arietinum L. HOM05D000490 ORTHO05D000785 4.8e-07 58.9 81 40.7
Pp3c13_20310 Physcomitrium patens HOM05D005692 ORTHO05D006953 4.8e-07 58.9 57 45.6
CSS0001736 Camellia sinensis var. sinensis HOM05D000490 ORTHO05D000785 8.3e-07 58.2 84 45.2
Manes.01G223700 Manihot esculenta HOM05D000490 ORTHO05D000785 8.3e-07 58.2 75 45.3
VMungo0464G0104 Vigna mungo HOM05D000490 ORTHO05D000785 8.3e-07 58.2 83 39.8
TAR624G0420 Trochodendron aralioides HOM05D000490 ORTHO05D000785 1.8e-06 57.0 106 38.7
Lj2g0000281 Lotus japonicus HOM05D000490 ORTHO05D000785 2.4e-06 56.6 81 43.2
CSS0008688 Camellia sinensis var. sinensis HOM05D000490 ORTHO05D000785 7.0e-06 55.1 84 44.0
Phvul.004G176600 Phaseolus vulgaris HOM05D000490 ORTHO05D000785 7.0e-06 55.1 81 39.5


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