Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN23G0450 Fragaria x ananassa HOM05D011814 ORTHO05D010151 4.2e-210 734.9 534 100.0
FAN05G1532 Fragaria x ananassa HOM05D011814 ORTHO05D010480 8.7e-139 498.0 425 98.1
FAN12G1733 Fragaria x ananassa HOM05D011814 ORTHO05D010151 1.4e-133 480.7 425 96.2
FAN17G3034 Fragaria x ananassa HOM05D011814 ORTHO05D010151 2.0e-114 417.2 428 82.0
FAN12G3175 Fragaria x ananassa HOM05D011814 ORTHO05D010151 3.7e-105 386.3 425 82.4
FvH4_4g21781 Fragaria vesca HOM05D011814 ORTHO05D010151 5.3e-104 382.5 425 81.4
RcHm_v2.0_Chr4g0428021 Rosa chinensis HOM05D011814 ORTHO05D010151 1.1e-96 358.2 427 61.4
FAN07G2706 Fragaria x ananassa HOM05D011814 ORTHO05D010151 1.3e-33 148.7 127 94.5
FAN26G1562 Fragaria x ananassa HOM05D000001 ORTHO05D000003 4.6e-31 140.2 78 91.0
FvH4_1g12715 Fragaria vesca HOM05D011814 ORTHO05D045925 7.9e-15 86.3 49 85.7
FAN24G0102 Fragaria x ananassa HOM05D011814 ORTHO05D045925 6.7e-14 83.2 64 70.3
Prupe.1G208400 Prunus persica HOM05D033970 ORTHO05D010151 8.8e-14 82.8 242 45.0
Atru.chr4.3190 Acer truncatum HOM05D011814 ORTHO05D010151 9.1e-11 72.8 121 45.5
MD16G1132300 Malus domestica HOM05D033970 ORTHO05D010151 1.5e-10 72.0 236 39.4
Lalb_Chr21g0310001 Lupinus albus HOM05D012338 ORTHO05D010151 4.5e-10 70.5 86 55.8
Lj5g0017234 Lotus japonicus HOM05D012338 ORTHO05D010151 1.3e-09 68.9 53 77.4
Glyma.10G142500 Glycine max HOM05D012338 ORTHO05D010151 2.9e-09 67.8 54 75.9
MD13G1136900 Malus domestica HOM05D033970 ORTHO05D010151 1.1e-08 65.9 240 36.2
Phvul.007G206100 Phaseolus vulgaris HOM05D012338 ORTHO05D010151 1.1e-08 65.9 123 42.3
Ca_10209_v3 Cicer arietinum L. HOM05D012338 ORTHO05D010151 1.4e-08 65.5 106 48.1
QL03p011177 Quercus lobata HOM05D010591 ORTHO05D010151 1.9e-08 65.1 91 52.7
VMungo0720G3156 Vigna mungo HOM05D012338 ORTHO05D010151 1.9e-08 65.1 95 55.8
CiPaw.01G001100 Carya illinoinensis HOM05D010591 ORTHO05D010151 3.2e-08 64.3 64 65.6
Ciclev10004633m.g Citrus clementina HOM05D011814 ORTHO05D010151 3.2e-08 64.3 265 35.8
Cfa004395 Carpinus fangiana HOM05D010591 ORTHO05D010151 4.2e-08 63.9 242 33.5
Lalb_Chr02g0147471 Lupinus albus HOM05D012338 ORTHO05D010151 4.2e-08 63.9 80 55.0
TAR633G2217 Trochodendron aralioides HOM05D010591 ORTHO05D010151 5.5e-08 63.5 107 43.0
Glyma.20G091100 Glycine max HOM05D012338 ORTHO05D010151 9.4e-08 62.8 44 86.4
TPR.G34898 Trifolium pratense HOM05D012338 ORTHO05D010151 9.4e-08 62.8 222 32.0
Haze_15013 Corylus avellana HOM05D010591 ORTHO05D010151 1.2e-07 62.4 228 33.3
arahy.Tifrunner.gnm1.ann1.V2HZSR Arachis hypogaea HOM05D051797 ORTHO05D010151 2.1e-07 61.6 112 42.9
Eucgr.H04142 Eucalyptus grandis HOM05D011814 ORTHO05D010151 2.1e-07 61.6 103 47.6
Medtr1g084990 Medicago truncatula HOM05D012338 ORTHO05D010151 3.6e-07 60.8 51 72.5
GSVIVG01031340001 Vitis vinifera HOM05D010591 ORTHO05D010151 3.6e-07 60.8 70 62.9
Prupe.6G303400 Prunus persica HOM05D016522 ORTHO05D010151 7.9e-07 59.7 83 53.0
Dinv30954 Davidia involucrata HOM05D010591 ORTHO05D010151 1.0e-06 59.3 218 33.9
Manes.08G107000 Manihot esculenta HOM05D010591 ORTHO05D010151 1.4e-06 58.9 116 44.0
TAR365G0948 Trochodendron aralioides HOM05D010591 ORTHO05D010151 1.4e-06 58.9 228 32.9
Sc16g0009440 Simmondsia chinensis HOM05D017194 ORTHO05D010151 3.0e-06 57.8 48 66.7
Hma1.2p1_0759F.1_g213830 Hydrangea macrophylla HOM05D010591 ORTHO05D010151 5.1e-06 57.0 84 51.2
Potri.005G001700 Populus trichocarpa HOM05D010591 ORTHO05D010151 5.1e-06 57.0 234 31.6
CANSAT54G2363 Cannabis sativa HOM05D017194 ORTHO05D010151 6.7e-06 56.6 122 42.6
CARHR186870 Cardamine hirsuta HOM05D010296 ORTHO05D011853 6.7e-06 56.6 133 38.3


User provided reference genes

Program Settings