Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN23G0376 Fragaria x ananassa HOM05D007315 ORTHO05D008940 0.0e+00 1359.0 683 100.0
FAN26G2088 Fragaria x ananassa HOM05D007315 ORTHO05D008940 0.0e+00 1148.3 619 94.7
FAN26G2097 Fragaria x ananassa HOM05D007315 ORTHO05D008940 0.0e+00 1148.3 619 94.7
FAN28G1745 Fragaria x ananassa HOM05D007315 ORTHO05D008940 0.0e+00 1097.8 618 91.3
FvH4_1g00220 Fragaria vesca HOM05D007315 ORTHO05D008940 3.2e-303 1044.6 618 87.7
RcHm_v2.0_Chr2g0084511 Rosa chinensis HOM05D007315 ORTHO05D008940 2.1e-262 909.1 694 73.3
Prupe.7G270200 Prunus persica HOM05D007315 ORTHO05D008940 7.4e-175 618.2 692 57.2
MD15G1142800 Malus domestica HOM05D007315 ORTHO05D008940 1.5e-164 583.9 685 54.9
Haze_11126 Corylus avellana HOM05D007315 ORTHO05D008940 2.8e-142 510.0 704 47.9
QL10p064604 Quercus lobata HOM05D007315 ORTHO05D008940 3.7e-142 509.6 707 49.1
Cfa008519 Carpinus fangiana HOM05D007315 ORTHO05D008940 7.0e-141 505.4 704 47.2
QL10p065726 Quercus lobata HOM05D007315 ORTHO05D008940 2.0e-140 503.8 704 49.1
CANSAT78G2341 Cannabis sativa HOM05D007315 ORTHO05D008940 7.8e-132 475.3 680 46.6
CiPaw.02G125100 Carya illinoinensis HOM05D007315 ORTHO05D008940 2.3e-128 463.8 688 46.4
MD00G1086900 Malus domestica HOM05D007315 ORTHO05D008940 1.7e-126 457.6 541 56.0
Ciclev10019166m.g Citrus clementina HOM05D007315 ORTHO05D008940 3.2e-125 453.4 685 46.0
Atru.chr3.1974 Acer truncatum HOM05D007315 ORTHO05D008940 3.4e-111 406.8 644 44.7
TWI15G1252 Tripterygium wilfordii HOM05D007315 ORTHO05D008940 4.9e-110 402.9 648 44.4
Potri.007G145400 Populus trichocarpa HOM05D007315 ORTHO05D008940 5.1e-107 392.9 696 42.5
CiPaw.01G202000 Carya illinoinensis HOM05D007315 ORTHO05D008940 1.9e-106 391.0 676 42.5
GSVIVG01038254001 Vitis vinifera HOM05D007315 ORTHO05D008940 2.8e-105 387.1 657 43.7
Sabra07G0115600 Salix brachista HOM05D007315 ORTHO05D008940 2.9e-102 377.1 707 41.3
Potri.017G002200 Populus trichocarpa HOM05D007315 ORTHO05D008940 1.3e-99 368.2 698 40.5
Manes.05G207100 Manihot esculenta HOM05D007315 ORTHO05D008940 9.6e-98 362.1 665 41.8
Dinv33248 Davidia involucrata HOM05D007315 ORTHO05D008940 2.6e-95 354.0 644 42.5
ClCG06G009750 Citrullus lanatus HOM05D007315 ORTHO05D008940 3.8e-94 350.1 687 41.5
Cpa.g.sc151.10 Carica papaya HOM05D007315 ORTHO05D008940 2.4e-93 347.4 609 41.5
Sed0008861 Sechium edule HOM05D007315 ORTHO05D008940 3.2e-93 347.1 621 42.8
CsaV3_2G011220 Cucumis sativus L. HOM05D007315 ORTHO05D008940 4.6e-92 343.2 632 41.3
Duzib128G0490 Durio zibethinus HOM05D007315 ORTHO05D008940 4.6e-92 343.2 633 41.1
Thecc.05G001400 Theobroma cacao HOM05D007315 ORTHO05D008940 3.0e-91 340.5 683 38.5
MELO3C020340.2 Cucumis melo HOM05D007315 ORTHO05D008940 2.8e-89 334.0 682 39.7
Sabra17G0006200 Salix brachista HOM05D007315 ORTHO05D008940 2.8e-89 334.0 678 39.1
Eucgr.A00422 Eucalyptus grandis HOM05D007315 ORTHO05D008940 1.1e-88 332.0 628 38.9
Lalb_Chr02g0150561 Lupinus albus HOM05D007315 ORTHO05D008940 7.6e-87 325.9 680 38.5
Glyma.10G188000 Glycine max HOM05D007315 ORTHO05D008940 5.4e-85 319.7 689 37.9
Nn1g09432 Nelumbo nucifera HOM05D007315 ORTHO05D008940 7.1e-85 319.3 722 37.4
Glyma.20G202800 Glycine max HOM05D007315 ORTHO05D008940 8.7e-83 312.4 691 38.1
Rhsim09G0003400 Rhododendron simsii HOM05D007315 ORTHO05D008940 1.5e-79 301.6 639 39.3
TAR362G0103 Trochodendron aralioides HOM05D007315 ORTHO05D008940 1.5e-79 301.6 676 35.8
CSS0005699 Camellia sinensis var. sinensis HOM05D007315 ORTHO05D008940 3.8e-78 297.0 493 42.0
DCAR_027494 Daucus carota HOM05D007315 ORTHO05D008940 1.1e-77 295.4 663 38.2
arahy.Tifrunner.gnm1.ann1.K0K7GF Arachis hypogaea HOM05D007315 ORTHO05D008940 1.6e-76 291.6 681 37.3
Ca_09817_v3 Cicer arietinum L. HOM05D007315 ORTHO05D008940 2.1e-76 291.2 704 35.7
Lj5g0028022 Lotus japonicus HOM05D007315 ORTHO05D008940 2.7e-76 290.8 670 36.0
TPR.G26430 Trifolium pratense HOM05D007315 ORTHO05D008940 4.3e-74 283.5 682 35.9
Gohir.D10G003900 Gossypium hirsutum HOM05D007315 ORTHO05D008940 9.6e-74 282.3 693 35.6
VMungo0720G0938 Vigna mungo HOM05D007315 ORTHO05D008940 9.6e-74 282.3 666 35.6
PGR042G2132 Punica granatum HOM05D007315 ORTHO05D008940 4.8e-73 280.0 686 36.2
Medtr1g073930 Medicago truncatula HOM05D007315 ORTHO05D008940 6.2e-73 279.6 685 35.9
Atru.chr3.1981 Acer truncatum HOM05D007315 ORTHO05D008940 1.4e-72 278.5 444 43.7
AUR62002486 Chenopodium quinoa HOM05D007315 ORTHO05D008940 1.4e-72 278.5 620 36.1
Gohir.A10G003901 Gossypium hirsutum HOM05D007315 ORTHO05D008940 1.5e-71 275.0 733 35.1
EL10Ac3g06171 Beta vulgaris HOM05D007315 ORTHO05D008940 5.8e-71 273.1 669 35.7
Gorai.011G004300 Gossypium raimondii HOM05D007315 ORTHO05D008940 7.6e-71 272.7 669 36.2
COL.COLO4_23477 Corchorus olitorius HOM05D007315 ORTHO05D008940 1.7e-70 271.6 474 40.9
Phvul.007G128900 Phaseolus vulgaris HOM05D007315 ORTHO05D008940 2.5e-69 267.7 705 35.2
Psat6g133000 Pisum sativum HOM05D007315 ORTHO05D008940 2.5e-69 267.7 643 36.5
AUR62023706 Chenopodium quinoa HOM05D007315 ORTHO05D008940 1.8e-64 251.5 615 36.4
CSS0008240 Camellia sinensis var. sinensis HOM05D007315 ORTHO05D008940 6.9e-64 249.6 594 35.5
arahy.Tifrunner.gnm1.ann1.BRX18T Arachis hypogaea HOM05D007315 ORTHO05D008940 9.0e-64 249.2 677 36.0
AT2G43990 Arabidopsis thaliana HOM05D007315 ORTHO05D008940 1.5e-63 248.4 689 33.8
AL4G42870 Arabidopsis lyrata HOM05D007315 ORTHO05D008940 2.1e-60 238.0 687 32.9
Peaxi162Scf00057g00225 Petunia axillaris HOM05D007315 ORTHO05D008940 2.7e-60 237.7 647 34.2
QL10p064445 Quercus lobata HOM05D007315 ORTHO05D008940 2.7e-60 237.7 372 48.9
Carub.0004s2655 Capsella rubella HOM05D007315 ORTHO05D008940 2.3e-59 234.6 690 32.0
Solyc12g017970.1 Solanum lycopersicum HOM05D007315 ORTHO05D008940 5.7e-58 229.9 650 32.8
PGSC0003DMG400020383 Solanum tuberosum HOM05D007315 ORTHO05D008940 1.7e-57 228.4 666 33.2
CARHR139160 Cardamine hirsuta HOM05D007315 ORTHO05D008940 6.3e-57 226.5 672 33.9
THA.LOC104802348 Tarenaya hassleriana HOM05D007315 ORTHO05D008940 1.1e-56 225.7 682 33.7
Nitab4.5_0000160g0040 Nicotiana tabacum HOM05D007315 ORTHO05D008940 9.1e-56 222.6 653 34.0
Nitab4.5_0002789g0030 Nicotiana tabacum HOM05D007315 ORTHO05D008940 2.6e-55 221.1 650 33.5
Sopen12g009190 Solanum pennellii HOM05D007315 ORTHO05D008940 7.7e-55 219.5 657 34.1
THA.LOC104804323 Tarenaya hassleriana HOM05D007315 ORTHO05D008940 7.7e-55 219.5 696 33.0
Sp4g26080 Schrenkiella parvula HOM05D007315 ORTHO05D008940 2.9e-54 217.6 669 32.9
Ah.07g203260 Amaranthus hybridus HOM05D007315 ORTHO05D008940 1.9e-53 214.9 559 36.9
Oeu018063.1 Olea europaea HOM05D007315 ORTHO05D008940 7.2e-53 213.0 474 35.0
Thhalv10001359m.g Eutrema salsugineum HOM05D007315 ORTHO05D008940 1.6e-52 211.8 693 31.5
Hma1.2p1_1085F.1_g255400 Hydrangea macrophylla HOM05D007315 ORTHO05D008940 1.5e-50 205.3 471 36.5
PSO732G0261 Papaver somniferum HOM05D007315 ORTHO05D008940 5.7e-50 203.4 493 35.5
Ah.13g073150 Amaranthus hybridus HOM05D007315 ORTHO05D008940 4.5e-47 193.7 613 32.5
ECA238G3268 Erigeron canadensis HOM05D007315 ORTHO05D008940 8.5e-46 189.5 449 35.0
SalBow3G0669 Salvia bowleyana HOM05D007315 ORTHO05D008940 3.2e-45 187.6 646 33.7
COL.COLO4_20289 Corchorus olitorius HOM05D007315 ORTHO05D008940 1.2e-44 185.7 286 43.7
MBI07_g42068_MAGBIO Magnolia biondii HOM05D007315 ORTHO05D008940 3.0e-43 181.0 524 33.8
MSTRG.24547 Avicennia marina HOM05D007315 ORTHO05D008940 3.3e-42 177.6 735 29.1
A05p04140 Brassica napus HOM05D007315 ORTHO05D008940 9.7e-42 176.0 504 34.1
BraA05t19400Z Brassica rapa HOM05D007315 ORTHO05D008940 2.4e-40 171.4 505 33.3
Aqoxy5G03722 Aquilegia oxysepala HOM05D007315 ORTHO05D008940 2.0e-39 168.3 679 29.9
HanXRQChr14g0438301 Helianthus annuus HOM05D007315 ORTHO05D008940 4.5e-39 167.2 461 32.8
Sc19g0002390 Simmondsia chinensis HOM05D007315 ORTHO05D008940 5.0e-38 163.7 641 30.3
BolC4t22121H Brassica oleracea HOM05D007315 ORTHO05D008940 2.7e-36 157.9 488 33.8
CDE04G0399 Ceratophyllum demersum HOM05D007315 ORTHO05D008940 2.7e-36 157.9 457 31.3
Migut.N03024 Erythranthe guttata HOM05D007315 ORTHO05D008940 1.0e-35 156.0 551 30.5
CDE07G0865 Ceratophyllum demersum HOM05D007315 ORTHO05D008940 1.4e-32 145.6 649 28.8
C04p04910 Brassica napus HOM05D007315 ORTHO05D008940 2.4e-32 144.8 423 33.6
SGA_v2.0_scaffold25G11016 Striga asiatica HOM05D007315 ORTHO05D008940 2.6e-26 124.8 658 26.6
Duzib093G0367 Durio zibethinus HOM05D007315 ORTHO05D008940 3.5e-23 114.4 468 29.9
BcaC02g12347 Brassica carinata HOM05D007315 ORTHO05D008940 3.3e-21 107.8 354 31.4
SGA_v2.0_scaffold19G08894 Striga asiatica HOM05D007315 ORTHO05D008940 2.1e-20 105.1 657 25.9
HPP92_007592 Vanilla planifolia HOM05D007315 ORTHO05D008940 4.7e-20 104.0 438 27.6
Zm00001eb434100 Zea mays HOM05D019859 ORTHO05D008940 1.6e-15 89.0 690 24.9
Os11g0247500 Oryza sativa ssp. japonica HOM05D019859 ORTHO05D008940 3.9e-14 84.3 644 24.5
unitig_578.g16246 Utricularia gibba HOM05D007315 ORTHO05D008940 1.9e-13 82.0 127 44.9
ATR0743G232 Amborella trichopoda HOM05D007315 ORTHO05D008940 2.1e-12 78.6 308 27.9
Actinidia39246 Actinidia chinensis HOM05D007315 ORTHO05D008940 3.1e-11 74.7 311 30.2
Zm00001eb136730 Zea mays HOM05D019859 ORTHO05D008940 2.6e-10 71.6 387 26.1


User provided reference genes

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