Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN23G0276 Fragaria x ananassa HOM05D004769 ORTHO05D005605 8.5e-67 257.3 175 100.0
FAN07G1815 Fragaria x ananassa HOM05D004769 ORTHO05D005605 2.7e-44 182.6 106 100.0
FAN05G2233 Fragaria x ananassa HOM05D004769 ORTHO05D005605 5.9e-44 181.4 105 100.0
FvH4_4g06670 Fragaria vesca HOM05D004769 ORTHO05D005605 2.8e-41 172.6 110 94.5
RcHm_v2.0_Chr4g0398571 Rosa chinensis HOM05D004769 ORTHO05D005605 2.6e-39 166.0 111 90.1
FAN22G0974 Fragaria x ananassa HOM05D004769 ORTHO05D005605 1.4e-32 143.7 98 91.8
FAN07G0829 Fragaria x ananassa HOM05D004769 ORTHO05D005605 2.3e-32 142.9 96 93.8
FAN12G3741 Fragaria x ananassa HOM05D004769 ORTHO05D005605 2.0e-31 139.8 101 88.1
FAN17G2568 Fragaria x ananassa HOM05D004769 ORTHO05D005605 3.4e-31 139.0 101 86.1
MD16G1242400 Malus domestica HOM05D004769 ORTHO05D005605 7.5e-31 137.9 113 78.8
Prupe.1G069400 Prunus persica HOM05D004769 ORTHO05D005605 8.3e-30 134.4 114 76.3
MD13G1237000 Malus domestica HOM05D004769 ORTHO05D005605 1.0e-27 127.5 123 69.1
Haze_14305 Corylus avellana HOM05D004769 ORTHO05D005605 1.4e-21 107.1 113 66.4
QL02p060102 Quercus lobata HOM05D004769 ORTHO05D005605 1.0e-19 100.9 109 65.1
Sabra04G0050400 Salix brachista HOM05D004769 ORTHO05D005605 1.1e-18 97.4 120 56.7
CiPaw.03G077600 Carya illinoinensis HOM05D004769 ORTHO05D005605 5.6e-18 95.1 110 59.1
PGR042G1215 Punica granatum HOM05D004769 ORTHO05D005605 5.6e-18 95.1 114 60.5
Cpa.g.sc178.7 Carica papaya HOM05D004769 ORTHO05D005605 1.2e-17 94.0 110 56.4
Cfa007768 Carpinus fangiana HOM05D004769 ORTHO05D005605 4.0e-16 89.0 72 65.3
Manes.02G080000 Manihot esculenta HOM05D004769 ORTHO05D005605 5.2e-16 88.6 121 52.9
Sed0006929 Sechium edule HOM05D004769 ORTHO05D005605 8.9e-16 87.8 116 56.9
Potri.004G075700 Populus trichocarpa HOM05D004769 ORTHO05D005605 1.2e-15 87.4 119 52.1
CSS0036345 Camellia sinensis var. sinensis HOM05D004769 ORTHO05D005605 1.5e-15 87.0 61 67.2
Ca_05772_v3 Cicer arietinum L. HOM05D004769 ORTHO05D005605 2.0e-15 86.7 114 56.1
LjContig00141g0012428 Lotus japonicus HOM05D004769 ORTHO05D005605 2.6e-15 86.3 110 57.3
GSVIVG01026312001 Vitis vinifera HOM05D004769 ORTHO05D005605 5.8e-15 85.1 108 46.3
CANSAT78G2338 Cannabis sativa HOM05D004769 ORTHO05D005605 9.9e-15 84.3 112 56.2
ClCG01G008650 Citrullus lanatus HOM05D004769 ORTHO05D005605 1.7e-14 83.6 112 56.2
Potri.017G144121 Populus trichocarpa HOM05D004769 ORTHO05D005605 1.7e-14 83.6 70 57.1
Atru.chr1.1954 Acer truncatum HOM05D004769 ORTHO05D005605 3.7e-14 82.4 61 60.7
Hma1.2p1_0158F.1_g069800 Hydrangea macrophylla HOM05D004769 ORTHO05D005605 4.9e-14 82.0 56 66.1
Sed0026946 Sechium edule HOM05D004769 ORTHO05D005605 4.9e-14 82.0 111 56.8
Thecc.04G060900 Theobroma cacao HOM05D004769 ORTHO05D005605 8.4e-14 81.3 72 58.3
Glyma.02G241900 Glycine max HOM05D004769 ORTHO05D005605 1.1e-13 80.9 116 43.1
Glyma.14G211600 Glycine max HOM05D004769 ORTHO05D005605 1.1e-13 80.9 69 58.0
Cc07_g12960 Coffea canephora HOM05D004769 ORTHO05D005605 1.4e-13 80.5 61 60.7
Lalb_Chr10g0104101 Lupinus albus HOM05D004769 ORTHO05D005605 1.4e-13 80.5 105 58.1
Ciclev10015797m.g Citrus clementina HOM05D004769 ORTHO05D005605 1.9e-13 80.1 122 54.1
MELO3C025080.2 Cucumis melo HOM05D004769 ORTHO05D005605 2.4e-13 79.7 112 57.1
Phvul.008G239200 Phaseolus vulgaris HOM05D004769 ORTHO05D005605 2.4e-13 79.7 71 59.2
VMungo0647G0921 Vigna mungo HOM05D004769 ORTHO05D005605 3.2e-13 79.3 69 59.4
Actinidia35715 Actinidia chinensis HOM05D004769 ORTHO05D005605 7.1e-13 78.2 61 60.7
Medtr5g077180 Medicago truncatula HOM05D004769 ORTHO05D005605 7.1e-13 78.2 68 57.4
AUR62017457 Chenopodium quinoa HOM05D004769 ORTHO05D005605 1.6e-12 77.0 52 71.2
AUR62032521 Chenopodium quinoa HOM05D004769 ORTHO05D005605 1.6e-12 77.0 52 71.2
Duzib211G0206 Durio zibethinus HOM05D004769 ORTHO05D005605 1.6e-12 77.0 112 52.7
Lalb_Chr17g0345901 Lupinus albus HOM05D004769 ORTHO05D005605 1.6e-12 77.0 71 56.3
Psat2g044720 Pisum sativum HOM05D004769 ORTHO05D005605 1.6e-12 77.0 69 58.0
Lalb_Chr04g0251441 Lupinus albus HOM05D004769 ORTHO05D005605 2.1e-12 76.6 71 57.7
arahy.Tifrunner.gnm1.ann1.SAK0JK Arachis hypogaea HOM05D004769 ORTHO05D005605 2.7e-12 76.3 70 54.3
Dinv19070 Davidia involucrata HOM05D004769 ORTHO05D005605 3.5e-12 75.9 61 60.7
Lj4A255T24 Lonicera japonica HOM05D004769 ORTHO05D005605 6.0e-12 75.1 104 47.1
Oeu032315.1 Olea europaea HOM05D004769 ORTHO05D005605 6.0e-12 75.1 54 64.8
Rhsim10G0183300 Rhododendron simsii HOM05D004769 ORTHO05D005605 7.8e-12 74.7 53 62.3
Eucgr.J01630 Eucalyptus grandis HOM05D004769 ORTHO05D005605 1.7e-11 73.6 61 59.0
ECA233G3826 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.3e-11 73.2 108 52.8
Oeu029083.1 Olea europaea HOM05D004769 ORTHO05D005605 2.3e-11 73.2 60 56.7
TAR374G1377 Trochodendron aralioides HOM05D004769 ORTHO05D005605 2.3e-11 73.2 131 52.7
Peaxi162Scf00442g00627 Petunia axillaris HOM05D004769 ORTHO05D005605 8.6e-11 71.2 56 55.4
EL10Ac6g13916 Beta vulgaris HOM05D004769 ORTHO05D005605 1.1e-10 70.9 61 60.7
TPR.G9995 Trifolium pratense HOM05D004769 ORTHO05D005605 1.1e-10 70.9 58 56.9
Actinidia28787 Actinidia chinensis HOM05D004769 ORTHO05D005605 1.9e-10 70.1 56 57.1
CsaV3_5G020660 Cucumis sativus L. HOM05D004769 ORTHO05D005605 1.9e-10 70.1 106 49.1
Lsat_1_v5_gn_8_18601 Lactuca sativa HOM05D004769 ORTHO05D005605 1.9e-10 70.1 97 52.6
Sc11g0004750 Simmondsia chinensis HOM05D004769 ORTHO05D005605 1.9e-10 70.1 57 61.4
TWI77G0470 Tripterygium wilfordii HOM05D004769 ORTHO05D005605 2.5e-10 69.7 56 58.9
TAR375G0174 Trochodendron aralioides HOM05D004769 ORTHO05D005605 2.5e-10 69.7 72 55.6
Lj2C513G15 Lonicera japonica HOM05D004769 ORTHO05D005605 4.3e-10 68.9 56 57.1
MBI04_g35346_MAGBIO Magnolia biondii HOM05D004769 ORTHO05D005605 5.6e-10 68.6 55 63.6
TWI74G1557 Tripterygium wilfordii HOM05D004769 ORTHO05D005605 5.6e-10 68.6 57 59.6
CAN.G525.4 Capsicum annuum HOM05D004769 ORTHO05D005605 7.3e-10 68.2 57 57.9
Solyc04g014560.4 Solanum lycopersicum HOM05D004769 ORTHO05D005605 9.6e-10 67.8 57 54.4
Sopen04g006720 Solanum pennellii HOM05D004769 ORTHO05D005605 9.6e-10 67.8 57 54.4
Dinv28230 Davidia involucrata HOM05D004769 ORTHO05D005605 1.2e-09 67.4 119 48.7
PSO170G3102 Papaver somniferum HOM05D004769 ORTHO05D005605 1.6e-09 67.0 110 50.0
Aqoxy5G00268 Aquilegia oxysepala HOM05D004769 ORTHO05D005605 2.8e-09 66.2 63 58.7
MSTRG.3686 Avicennia marina HOM05D004769 ORTHO05D005605 2.8e-09 66.2 67 50.7
COL.COLO4_05842 Corchorus olitorius HOM05D004769 ORTHO05D005605 2.8e-09 66.2 61 52.5
Zm00001eb283000 Zea mays HOM05D004769 ORTHO05D005605 6.2e-09 65.1 57 56.1
Nitab4.5_0005193g0040 Nicotiana tabacum HOM05D004769 ORTHO05D005605 8.1e-09 64.7 57 54.4
Gohir.D08G062500 Gossypium hirsutum HOM05D004769 ORTHO05D005605 1.1e-08 64.3 68 51.5
Nitab4.5_0000574g0160 Nicotiana tabacum HOM05D004769 ORTHO05D005605 1.1e-08 64.3 57 54.4
Gorai.004G064700 Gossypium raimondii HOM05D004769 ORTHO05D005605 1.4e-08 63.9 68 51.5
PSO017G5633 Papaver somniferum HOM05D004769 ORTHO05D005605 1.8e-08 63.5 109 52.3
PGSC0003DMG400023617 Solanum tuberosum HOM05D004769 ORTHO05D005605 1.8e-08 63.5 57 50.9
vmacro20487 Vaccinium macrocarpon HOM05D004769 ORTHO05D005605 1.8e-08 63.5 46 63.0
Nn1g02020 Nelumbo nucifera HOM05D004769 ORTHO05D005605 2.4e-08 63.2 56 57.1
Migut.H02243 Erythranthe guttata HOM05D004769 ORTHO05D005605 4.0e-08 62.4 60 53.3
Gohir.A08G052900 Gossypium hirsutum HOM05D004769 ORTHO05D005605 1.5e-07 60.5 68 50.0
HanXRQChr08g0218471 Helianthus annuus HOM05D004769 ORTHO05D005605 1.5e-07 60.5 56 57.1
Os05g0178900 Oryza sativa ssp. japonica HOM05D004769 ORTHO05D005605 2.6e-07 59.7 56 55.4
SGA_v2.0_scaffold45G17131 Striga asiatica HOM05D004769 ORTHO05D005605 2.6e-07 59.7 50 58.0
SEGI_40758 Sequoiadendron giganteum HOM05D004769 ORTHO05D005605 7.6e-07 58.2 56 48.2
HPP92_017811 Vanilla planifolia HOM05D004769 ORTHO05D005605 7.6e-07 58.2 62 50.0
Ah.02g128700 Amaranthus hybridus HOM05D004769 ORTHO05D005605 9.9e-07 57.8 50 52.0
ATR0083G043 Amborella trichopoda HOM05D004769 ORTHO05D005605 1.7e-06 57.0 69 44.9
CARHR215720 Cardamine hirsuta HOM05D004769 ORTHO05D005605 2.2e-06 56.6 57 50.9
Thhalv10027788m.g Eutrema salsugineum HOM05D004769 ORTHO05D005605 2.2e-06 56.6 52 53.8
Hma1.2p1_0034F.1_g021310 Hydrangea macrophylla HOM05D004769 ORTHO05D005605 2.9e-06 56.2 35 74.3
Zm00001eb377290 Zea mays HOM05D004769 ORTHO05D005605 3.8e-06 55.8 45 62.2
THA.LOC104823824 Tarenaya hassleriana HOM05D004769 ORTHO05D005605 4.9e-06 55.5 58 50.0
Sp7g05100 Schrenkiella parvula HOM05D004769 ORTHO05D005605 6.4e-06 55.1 119 42.0


User provided reference genes

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