Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN23G0264 Fragaria x ananassa HOM05D006100 ORTHO05D007539 5.7e-59 230.7 117 100.0
FAN28G1903 Fragaria x ananassa HOM05D006100 ORTHO05D007539 1.8e-49 199.1 130 83.8
FvH4_1g13390 Fragaria vesca HOM05D006100 ORTHO05D007539 5.3e-49 197.6 130 83.1
FAN19G3207 Fragaria x ananassa HOM05D006100 ORTHO05D007539 5.3e-49 197.6 130 83.1
RcHm_v2.0_Chr2g0101751 Rosa chinensis HOM05D006100 ORTHO05D007539 1.6e-40 169.5 130 70.0
Prupe.7G153900 Prunus persica HOM05D006100 ORTHO05D007539 1.5e-27 126.3 124 59.7
FAN26G1330 Fragaria x ananassa HOM05D006100 ORTHO05D007539 4.4e-27 124.8 68 92.6
MD02G1148600 Malus domestica HOM05D006100 ORTHO05D007539 5.8e-27 124.4 95 70.5
Haze_15098 Corylus avellana HOM05D006100 ORTHO05D007539 4.1e-25 118.2 95 66.3
Phvul.002G029900 Phaseolus vulgaris HOM05D006100 ORTHO05D007539 1.7e-23 112.8 87 65.5
MD15G1262800 Malus domestica HOM05D006100 ORTHO05D007539 3.9e-23 111.7 83 72.3
VMungo1215G0978 Vigna mungo HOM05D006100 ORTHO05D007539 6.6e-23 110.9 101 59.4
Lalb_Chr09g0322441 Lupinus albus HOM05D006100 ORTHO05D007539 1.2e-21 106.7 101 59.4
QL06p045927 Quercus lobata HOM05D006100 ORTHO05D007539 1.2e-21 106.7 98 61.2
TWI09G0021 Tripterygium wilfordii HOM05D006100 ORTHO05D007539 3.6e-21 105.1 91 63.7
Thecc.01G036600 Theobroma cacao HOM05D006100 ORTHO05D007539 6.2e-21 104.4 96 63.5
Ciclev10026748m.g Citrus clementina HOM05D006100 ORTHO05D007539 8.0e-21 104.0 100 58.0
Atru.chr3.567 Acer truncatum HOM05D006100 ORTHO05D007539 1.1e-20 103.6 98 57.1
CiPaw.02G017200 Carya illinoinensis HOM05D006100 ORTHO05D007539 1.1e-20 103.6 92 64.1
COL.COLO4_22086 Corchorus olitorius HOM05D006100 ORTHO05D007539 1.1e-20 103.6 90 64.4
Aqoxy6G01099 Aquilegia oxysepala HOM05D006100 ORTHO05D007539 2.3e-20 102.4 104 53.8
Cfa004303 Carpinus fangiana HOM05D006100 ORTHO05D007539 4.0e-20 101.7 102 56.9
Dinv39980 Davidia involucrata HOM05D006100 ORTHO05D007539 5.2e-20 101.3 83 65.1
Lj2g0016254 Lotus japonicus HOM05D006100 ORTHO05D007539 5.2e-20 101.3 85 63.5
arahy.Tifrunner.gnm1.ann1.L1JEHI Arachis hypogaea HOM05D006100 ORTHO05D007539 6.8e-20 100.9 91 61.5
ECA232G0790 Erigeron canadensis HOM05D006100 ORTHO05D007539 6.8e-20 100.9 87 63.2
THA.LOC104821276 Tarenaya hassleriana HOM05D006100 ORTHO05D007539 8.9e-20 100.5 97 57.7
arahy.Tifrunner.gnm1.ann1.IKK69W Arachis hypogaea HOM05D006100 ORTHO05D007539 2.6e-19 99.0 91 61.5
CSS0018588 Camellia sinensis var. sinensis HOM05D006100 ORTHO05D007539 2.6e-19 99.0 86 59.3
CiPaw.01G037400 Carya illinoinensis HOM05D006100 ORTHO05D007539 2.6e-19 99.0 80 65.0
Duzib147G1001 Durio zibethinus HOM05D006100 ORTHO05D007539 4.4e-19 98.2 113 53.1
MD15G1262900 Malus domestica HOM05D006100 ORTHO05D007539 4.4e-19 98.2 95 56.8
HanXRQChr11g0324821 Helianthus annuus HOM05D006100 ORTHO05D007539 1.3e-18 96.7 80 62.5
PGR119G0418 Punica granatum HOM05D006100 ORTHO05D007539 2.2e-18 95.9 109 53.2
Lsat_1_v5_gn_4_148381 Lactuca sativa HOM05D006100 ORTHO05D007539 2.9e-18 95.5 85 60.0
Gohir.A11G184500 Gossypium hirsutum HOM05D006100 ORTHO05D007539 4.9e-18 94.7 97 55.7
PSO675G2321 Papaver somniferum HOM05D006100 ORTHO05D007539 6.4e-18 94.4 84 61.9
Cpa.g.sc6.110 Carica papaya HOM05D006100 ORTHO05D007539 8.3e-18 94.0 101 54.5
FvH4_1g13380 Fragaria vesca HOM05D006100 ORTHO05D007539 8.3e-18 94.0 98 55.1
FAN19G2702 Fragaria x ananassa HOM05D006100 ORTHO05D007539 8.3e-18 94.0 98 55.1
Duzib264G0645 Durio zibethinus HOM05D006100 ORTHO05D007539 1.1e-17 93.6 86 59.3
Psat2g159960 Pisum sativum HOM05D006100 ORTHO05D007539 1.1e-17 93.6 93 59.1
Carub.0008s2773 Capsella rubella HOM05D006100 ORTHO05D007539 1.9e-17 92.8 80 65.0
FAN23G1739 Fragaria x ananassa HOM05D006100 ORTHO05D007539 3.2e-17 92.0 98 54.1
AT5G66780 Arabidopsis thaliana HOM05D006100 ORTHO05D007539 4.1e-17 91.7 79 64.6
FAN26G0501 Fragaria x ananassa HOM05D006100 ORTHO05D007539 4.1e-17 91.7 98 54.1
Medtr5g020060 Medicago truncatula HOM05D006100 ORTHO05D007539 5.4e-17 91.3 130 46.9
RcHm_v2.0_Chr2g0101741 Rosa chinensis HOM05D006100 ORTHO05D007539 9.2e-17 90.5 91 56.0
PGR102G3048 Punica granatum HOM05D006100 ORTHO05D007539 2.1e-16 89.4 99 52.5
AL8G44670 Arabidopsis lyrata HOM05D006100 ORTHO05D007539 3.5e-16 88.6 79 62.0
Gohir.A10G094900 Gossypium hirsutum HOM05D006100 ORTHO05D007539 4.6e-16 88.2 98 54.1
Eucgr.I02450 Eucalyptus grandis HOM05D006100 ORTHO05D007539 7.8e-16 87.4 110 48.2
PSO541G1538 Papaver somniferum HOM05D006100 ORTHO05D007539 1.0e-15 87.0 78 62.8
Sed0016253 Sechium edule HOM05D006100 ORTHO05D007539 1.3e-15 86.7 83 54.2
BcaC06g34744 Brassica carinata HOM05D006100 ORTHO05D007539 1.7e-15 86.3 77 62.3
C07p25000 Brassica napus HOM05D006100 ORTHO05D007539 1.7e-15 86.3 77 62.3
BcaB07g29655 Brassica carinata HOM05D006100 ORTHO05D007539 5.1e-15 84.7 120 45.8
BolC7t43033H Brassica oleracea HOM05D006100 ORTHO05D007539 5.1e-15 84.7 75 62.7
FAN28G0382 Fragaria x ananassa HOM05D006100 ORTHO05D007539 6.6e-15 84.3 70 65.7
Glyma.11G067900 Glycine max HOM05D006100 ORTHO05D007539 8.6e-15 84.0 127 47.2
Rhsim08G0115500 Rhododendron simsii HOM05D006100 ORTHO05D007539 1.9e-14 82.8 75 60.0
Manes.01G135000 Manihot esculenta HOM05D006100 ORTHO05D007539 2.5e-14 82.4 74 60.8
Sp2g29900 Schrenkiella parvula HOM05D006100 ORTHO05D007539 3.3e-14 82.0 93 52.7
A07p17150 Brassica napus HOM05D006100 ORTHO05D007539 4.3e-14 81.6 72 61.1
BraA07t29442Z Brassica rapa HOM05D006100 ORTHO05D007539 4.3e-14 81.6 72 61.1
CARHR280920 Cardamine hirsuta HOM05D006100 ORTHO05D007539 4.3e-14 81.6 117 49.6
Actinidia19182 Actinidia chinensis HOM05D006100 ORTHO05D007539 5.6e-14 81.3 87 51.7
Nitab4.5_0001385g0150 Nicotiana tabacum HOM05D006100 ORTHO05D007539 7.3e-14 80.9 84 56.0
Thhalv10005154m.g Eutrema salsugineum HOM05D006100 ORTHO05D007539 9.5e-14 80.5 72 61.1
Nitab4.5_0000434g0150 Nicotiana tabacum HOM05D006100 ORTHO05D007539 9.5e-14 80.5 84 56.0
MSTRG.2759 Avicennia marina HOM05D006100 ORTHO05D007539 1.2e-13 80.1 90 51.1
Aa31LG1G15340 Aethionema arabicum HOM05D006100 ORTHO05D007539 1.6e-13 79.7 69 63.8
BcaB02g09991 Brassica carinata HOM05D006100 ORTHO05D007539 1.6e-13 79.7 72 59.7
Nn5g29589 Nelumbo nucifera HOM05D006100 ORTHO05D007539 2.1e-13 79.3 94 48.9
vmacro17841 Vaccinium macrocarpon HOM05D006100 ORTHO05D007539 2.1e-13 79.3 80 56.2
A02p44400 Brassica napus HOM05D006100 ORTHO05D007539 2.8e-13 79.0 76 60.5
BraA02t09357Z Brassica rapa HOM05D006100 ORTHO05D007539 2.8e-13 79.0 76 60.5
BcaC03g18400 Brassica carinata HOM05D006100 ORTHO05D007539 4.7e-13 78.2 67 61.2
ClCG01G019510 Citrullus lanatus HOM05D006100 ORTHO05D007539 4.7e-13 78.2 120 42.5
Oeu009416.1 Olea europaea HOM05D006100 ORTHO05D007539 4.7e-13 78.2 77 55.8
Gohir.D10G093000 Gossypium hirsutum HOM05D006100 ORTHO05D007539 6.2e-13 77.8 98 50.0
C02p64790 Brassica napus HOM05D006100 ORTHO05D007539 8.1e-13 77.4 65 61.5
BolC2t12540H Brassica oleracea HOM05D006100 ORTHO05D007539 8.1e-13 77.4 65 61.5
Os03g0723400 Oryza sativa ssp. japonica HOM05D006100 ORTHO05D007539 1.8e-12 76.3 66 59.1
Oeu041448.1 Olea europaea HOM05D006100 ORTHO05D007539 2.3e-12 75.9 77 54.5
Solyc02g062770.2 Solanum lycopersicum HOM05D006100 ORTHO05D007539 2.3e-12 75.9 95 46.3
TAR376G0804 Trochodendron aralioides HOM05D001794 ORTHO05D004177 4.0e-12 75.1 72 56.9
unitig_899.g14492 Utricularia gibba HOM05D006100 ORTHO05D007539 4.0e-12 75.1 108 43.5
Glyma.16G140500 Glycine max HOM05D006100 ORTHO05D007539 6.8e-12 74.3 78 51.3
Sopen02g013800 Solanum pennellii HOM05D006100 ORTHO05D007539 8.9e-12 73.9 95 46.3
Nitab4.5_0003233g0010 Nicotiana tabacum HOM05D006100 ORTHO05D007539 1.5e-11 73.2 99 45.5
CANSAT01G1084 Cannabis sativa HOM05D006100 ORTHO05D007539 2.6e-11 72.4 127 44.1
Peaxi162Scf00515g00519 Petunia axillaris HOM05D006100 ORTHO05D007539 2.6e-11 72.4 99 48.5
CAN.G358.97 Capsicum annuum HOM05D006100 ORTHO05D007539 7.5e-11 70.9 94 48.9
CsaV3_6G046200 Cucumis sativus L. HOM05D006100 ORTHO05D007539 7.5e-11 70.9 84 50.0
PGSC0003DMG400015478 Solanum tuberosum HOM05D006100 ORTHO05D007539 1.3e-10 70.1 93 45.2
SGA_v2.0_scaffold276G46633 Striga asiatica HOM05D006100 ORTHO05D007539 6.4e-10 67.8 120 43.3
MD02G1148700 Malus domestica HOM05D006100 ORTHO05D007539 4.1e-09 65.1 131 41.2
HanXRQChr16g0530351 Helianthus annuus HOM05D006100 ORTHO05D007539 5.4e-09 64.7 82 45.1
Lj4g0020328 Lotus japonicus HOM05D006100 ORTHO05D007539 9.2e-09 63.9 81 48.1
Peaxi162Scf00008g03716 Petunia axillaris HOM05D006100 ORTHO05D007539 9.2e-09 63.9 68 52.9
AUR62007561 Chenopodium quinoa HOM05D006100 ORTHO05D007539 1.2e-08 63.5 118 39.0
DCAR_025920 Daucus carota HOM05D006100 ORTHO05D007539 1.2e-08 63.5 63 55.6
AUR62004046 Chenopodium quinoa HOM05D006100 ORTHO05D007539 2.1e-08 62.8 118 37.3
Prupe.7G153800 Prunus persica HOM05D006100 ORTHO05D007539 2.1e-08 62.8 67 53.7
TPR.G34229 Trifolium pratense HOM05D006100 ORTHO05D007539 4.6e-08 61.6 80 48.8
EL10Ac6g15568 Beta vulgaris HOM05D006100 ORTHO05D007539 6.0e-08 61.2 91 46.2
Migut.H00995 Erythranthe guttata HOM05D006100 ORTHO05D007539 1.0e-07 60.5 112 42.0
MBI16_g38642_MAGBIO Magnolia biondii HOM05D006100 ORTHO05D007539 1.0e-07 60.5 89 43.8
Oeu033643.1 Olea europaea HOM05D006100 ORTHO05D007539 1.3e-07 60.1 54 59.3
GSVIVG01018974001 Vitis vinifera HOM05D006100 ORTHO05D007539 1.7e-07 59.7 90 43.3
CSS0029658 Camellia sinensis var. sinensis HOM05D006100 ORTHO05D007539 3.0e-07 58.9 53 60.4
CDE01G0731 Ceratophyllum demersum HOM05D006100 ORTHO05D007539 3.0e-07 58.9 80 47.5
unitig_21.g20955 Utricularia gibba HOM05D003234 ORTHO05D003635 3.9e-07 58.5 89 43.8
Solyc02g085330.1 Solanum lycopersicum HOM05D006100 ORTHO05D007539 5.1e-07 58.2 60 55.0
Sopen02g030020 Solanum pennellii HOM05D006100 ORTHO05D007539 8.6e-07 57.4 92 44.6
Nitab4.5_0000136g0440 Nicotiana tabacum HOM05D006100 ORTHO05D007539 1.5e-06 56.6 129 34.9


User provided reference genes

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