Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN23G0182 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.9e-181 639.0 317 100.0
FAN23G0731 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.9e-181 639.0 317 100.0
FAN23G1358 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.9e-181 639.0 317 100.0
FAN28G1753 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.8e-116 422.5 290 74.5
FvH4_1g00691 Fragaria vesca HOM05D003981 ORTHO05D003666 3.2e-112 409.1 286 72.7
FAN08G0706 Fragaria x ananassa HOM05D005518 ORTHO05D001269 2.1e-71 273.5 290 54.1
FAN26G0221 Fragaria x ananassa HOM05D003981 ORTHO05D003666 5.3e-67 258.8 241 59.3
FvH4_1g00551 Fragaria vesca HOM05D003981 ORTHO05D003666 4.8e-52 209.1 257 47.1
RcHm_v2.0_Chr2g0085201 Rosa chinensis HOM05D003981 ORTHO05D003666 1.4e-51 207.6 230 52.6
FvH4_1g00570 Fragaria vesca HOM05D003981 ORTHO05D003666 5.3e-43 179.1 112 78.6
FAN13G2076 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.5e-40 171.0 217 50.2
FvH4_1g00700 Fragaria vesca HOM05D003981 ORTHO05D003666 2.1e-39 167.2 108 77.8
FAN25G1054 Fragaria x ananassa HOM05D005518 ORTHO05D001269 5.9e-34 149.1 283 39.2
FvH4_5g07510 Fragaria vesca HOM05D003981 ORTHO05D003666 1.6e-31 141.0 273 36.3
FvH4_5g07350 Fragaria vesca HOM05D003981 ORTHO05D003666 1.8e-30 137.5 264 36.4
FvH4_5g07470 Fragaria vesca HOM05D003981 ORTHO05D003666 1.2e-29 134.8 273 35.5
FAN14G0912 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.6e-26 124.4 258 32.6
FAN28G0935 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.7e-26 123.6 109 56.0
FAN07G1958 Fragaria x ananassa HOM05D003981 ORTHO05D003666 5.9e-26 122.5 279 35.1
RcHm_v2.0_Chr6g0253541 Rosa chinensis HOM05D003981 ORTHO05D003666 1.0e-25 121.7 264 34.8
FAN15G1118 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.3e-25 120.6 268 33.2
FAN16G2079 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.3e-25 120.6 273 33.7
FAN14G2468 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.9e-25 120.2 275 32.0
FvH4_6g14781 Fragaria vesca HOM05D003981 ORTHO05D003666 5.0e-25 119.4 259 32.4
FvH4_5g08848 Fragaria vesca HOM05D003981 ORTHO05D003666 1.5e-24 117.9 278 32.7
FvH4_3g40671 Fragaria vesca HOM05D003981 ORTHO05D003666 3.2e-24 116.7 277 33.6
FvH4_6g09801 Fragaria vesca HOM05D003981 ORTHO05D003666 5.5e-24 115.9 266 34.2
FAN14G1975 Fragaria x ananassa HOM05D003981 ORTHO05D003666 5.5e-24 115.9 269 34.2
FAN26G2126 Fragaria x ananassa HOM05D003981 ORTHO05D003666 6.1e-23 112.5 94 60.6
Prupe.2G209200 Prunus persica HOM05D003981 ORTHO05D003666 6.1e-23 112.5 305 30.8
FvH4_1g25190 Fragaria vesca HOM05D003981 ORTHO05D003666 3.0e-22 110.2 237 34.2
FAN12G2446 Fragaria x ananassa HOM05D003981 ORTHO05D003666 5.2e-22 109.4 287 32.8
Prupe.2G095800 Prunus persica HOM05D003981 ORTHO05D003666 1.2e-21 108.2 284 33.1
FAN04G1299 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.5e-21 107.8 224 35.3
FAN19G2785 Fragaria x ananassa HOM05D003981 ORTHO05D003666 3.4e-21 106.7 263 32.3
FAN17G1570 Fragaria x ananassa HOM05D003981 ORTHO05D003666 5.7e-21 105.9 285 33.7
FAN07G0986 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.3e-20 104.8 285 33.7
FvH4_6g03511 Fragaria vesca HOM05D003981 ORTHO05D003666 2.2e-20 104.0 210 32.9
MD12G1195000 Malus domestica HOM05D003981 ORTHO05D003666 2.2e-20 104.0 276 31.9
MD04G1179800 Malus domestica HOM05D003981 ORTHO05D003666 3.7e-20 103.2 302 30.1
RcHm_v2.0_Chr3g0480281 Rosa chinensis HOM05D003981 ORTHO05D003666 3.7e-20 103.2 274 32.8
RcHm_v2.0_Chr4g0428611 Rosa chinensis HOM05D003981 ORTHO05D003666 4.9e-20 102.8 271 32.1
FAN08G1984 Fragaria x ananassa HOM05D003981 ORTHO05D003666 8.3e-20 102.1 244 34.0
FvH4_4g34580 Fragaria vesca HOM05D003981 ORTHO05D003666 1.1e-19 101.7 273 32.6
FAN09G1093 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.1e-19 101.7 204 31.9
FAN08G0901 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.4e-19 100.5 271 33.9
FAN14G5156 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.4e-19 100.5 132 41.7
FAN11G1242 Fragaria x ananassa HOM05D003981 ORTHO05D003666 3.1e-19 100.1 229 34.1
FvH4_4g34520 Fragaria vesca HOM05D003981 ORTHO05D003666 5.4e-19 99.4 287 31.0
FAN09G1004 Fragaria x ananassa HOM05D003981 ORTHO05D003666 7.0e-19 99.0 285 29.5
FvH4_2g04190 Fragaria vesca HOM05D003981 ORTHO05D003666 9.2e-19 98.6 270 32.2
FAN24G2659 Fragaria x ananassa HOM05D003981 ORTHO05D003666 9.2e-19 98.6 270 32.2
MD11G1006900 Malus domestica HOM05D003981 ORTHO05D003666 9.2e-19 98.6 272 32.0
FAN12G3036 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.2e-18 98.2 270 31.5
FAN05G2982 Fragaria x ananassa HOM05D003981 ORTHO05D003666 4.5e-18 96.3 278 29.5
FvH4_2g25871 Fragaria vesca HOM05D003981 ORTHO05D003666 7.8e-18 95.5 215 33.5
FvH4_5g06780 Fragaria vesca HOM05D003981 ORTHO05D003666 1.0e-17 95.1 271 33.2
FAN18G0593 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.0e-17 95.1 271 33.2
Prupe.8G061400 Prunus persica HOM05D003981 ORTHO05D003666 1.0e-17 95.1 329 28.6
FAN15G2324 Fragaria x ananassa HOM05D002345 ORTHO05D002391 1.3e-17 94.7 269 32.0
FAN27G2648 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.3e-17 94.0 234 34.2
RcHm_v2.0_Chr3g0460411 Rosa chinensis HOM05D003981 ORTHO05D003666 2.3e-17 94.0 272 32.0
FAN04G2111 Fragaria x ananassa HOM05D003981 ORTHO05D003666 3.8e-17 93.2 268 31.3
FAN10G2747 Fragaria x ananassa HOM05D001225 ORTHO05D001252 3.8e-17 93.2 261 30.3
FvH4_3g13181 Fragaria vesca HOM05D003981 ORTHO05D003666 5.0e-17 92.8 212 34.0
Prupe.2G096000 Prunus persica HOM05D003981 ORTHO05D003666 5.0e-17 92.8 273 30.8
FAN18G1682 Fragaria x ananassa HOM05D003981 ORTHO05D003666 8.6e-17 92.0 213 31.9
FAN08G0171 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.5e-16 90.5 269 30.5
FAN13G0559 Fragaria x ananassa HOM05D003981 ORTHO05D003666 3.3e-16 90.1 274 30.3
Prupe.3G238400 Prunus persica HOM05D003981 ORTHO05D003666 3.3e-16 90.1 290 29.7
MD12G1195500 Malus domestica HOM05D003981 ORTHO05D003666 4.3e-16 89.7 308 28.6
FvH4_6g09911 Fragaria vesca HOM05D003981 ORTHO05D003666 1.2e-15 88.2 222 32.0
FAN19G2493 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.6e-15 87.8 226 31.0
FAN01G2610 Fragaria x ananassa HOM05D001225 ORTHO05D001252 3.6e-15 86.7 223 31.8
FvH4_5g38320 Fragaria vesca HOM05D003981 ORTHO05D003666 6.1e-15 85.9 276 31.9
MD12G1195600 Malus domestica HOM05D003981 ORTHO05D003666 6.1e-15 85.9 212 33.0
FAN06G2056 Fragaria x ananassa HOM05D001225 ORTHO05D001252 1.0e-14 85.1 122 42.6
FAN18G2397 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.0e-14 85.1 276 31.5
FAN09G1373 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.4e-14 84.7 129 41.1
FvH4_1g00812 Fragaria vesca HOM05D003981 ORTHO05D003666 1.8e-14 84.3 306 28.4
FvH4_4g22410 Fragaria vesca HOM05D003981 ORTHO05D003666 3.0e-14 83.6 126 39.7
FAN03G0829 Fragaria x ananassa HOM05D001225 ORTHO05D001252 5.2e-14 82.8 262 31.3
FAN20G0367 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.5e-13 81.3 293 28.3
FvH4_6g45801 Fragaria vesca HOM05D003981 ORTHO05D003666 2.6e-13 80.5 280 29.3
RcHm_v2.0_Chr5g0016491 Rosa chinensis HOM05D003981 ORTHO05D003666 4.4e-13 79.7 239 30.5
FvH4_2g20921 Fragaria vesca HOM05D003981 ORTHO05D003666 9.8e-13 78.6 302 27.8
FAN05G1092 Fragaria x ananassa HOM05D003981 ORTHO05D003666 9.8e-13 78.6 144 37.5
FAN14G5028 Fragaria x ananassa HOM05D003981 ORTHO05D003666 9.8e-13 78.6 144 37.5
FAN04G2735 Fragaria x ananassa HOM05D002662 ORTHO05D002957 1.7e-12 77.8 185 31.4
MD11G1006300 Malus domestica HOM05D003981 ORTHO05D003666 1.7e-12 77.8 124 41.1
FAN18G2469 Fragaria x ananassa HOM05D003981 ORTHO05D003666 3.7e-12 76.6 220 30.0
FAN19G0280 Fragaria x ananassa HOM05D003981 ORTHO05D003666 3.7e-12 76.6 282 28.4
Prupe.2G095900 Prunus persica HOM05D003981 ORTHO05D003666 3.7e-12 76.6 131 39.7
FAN25G0801 Fragaria x ananassa HOM05D003981 ORTHO05D003666 6.4e-12 75.9 91 45.1
Prupe.7G195100 Prunus persica HOM05D003981 ORTHO05D003666 1.8e-11 74.3 133 38.3
Prupe.7G195400 Prunus persica HOM05D003981 ORTHO05D003666 1.8e-11 74.3 133 38.3
CiPaw.14G115500 Carya illinoinensis HOM05D000007 ORTHO05D003666 4.1e-11 73.2 120 40.0
FAN02G1117 Fragaria x ananassa HOM05D003981 ORTHO05D003666 4.1e-11 73.2 80 45.0
FAN09G0546 Fragaria x ananassa HOM05D003981 ORTHO05D003666 4.1e-11 73.2 128 35.9
FAN02G3644 Fragaria x ananassa HOM05D003981 ORTHO05D003666 5.4e-11 72.8 115 40.9
FAN08G0629 Fragaria x ananassa HOM05D003981 ORTHO05D003666 5.4e-11 72.8 126 39.7
FAN18G0964 Fragaria x ananassa HOM05D003981 ORTHO05D003666 5.4e-11 72.8 232 28.0
FvH4_6g47480 Fragaria vesca HOM05D003981 ORTHO05D003666 7.0e-11 72.4 169 32.5
Ciclev10030374m.g Citrus clementina HOM05D003981 ORTHO05D003666 9.2e-11 72.0 92 44.6
FAN04G1922 Fragaria x ananassa HOM05D003981 ORTHO05D003666 9.2e-11 72.0 237 31.2
FAN02G2079 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.2e-10 71.6 251 27.5
FAN14G1511 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.2e-10 71.6 169 32.5
FvH4_5g31171 Fragaria vesca HOM05D003981 ORTHO05D003666 1.6e-10 71.2 285 29.1
RcHm_v2.0_Chr2g0164001 Rosa chinensis HOM05D003981 ORTHO05D003666 2.0e-10 70.9 259 27.0
FAN28G2016 Fragaria x ananassa HOM05D003981 ORTHO05D003666 4.6e-10 69.7 172 33.1
FAN26G3326 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.3e-09 68.2 142 33.8
FAN17G3075 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.7e-09 67.8 127 39.4
FvH4_6g47440 Fragaria vesca HOM05D003981 ORTHO05D003666 2.3e-09 67.4 237 27.4
FAN14G0149 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.3e-09 67.4 115 40.0
FAN14G2642 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.3e-09 67.4 115 40.0
FAN05G1423 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.1e-08 65.1 60 45.0
FAN18G0802 Fragaria x ananassa HOM05D002662 ORTHO05D003666 1.1e-08 65.1 68 48.5
FAN13G2481 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.5e-08 64.7 253 28.9
Prupe.2G095600 Prunus persica HOM05D003981 ORTHO05D003666 1.9e-08 64.3 113 38.9
TWI59G0221 Tripterygium wilfordii HOM05D003981 ORTHO05D003666 1.9e-08 64.3 132 37.1
FvH4_3g01041 Fragaria vesca HOM05D003981 ORTHO05D003666 2.5e-08 63.9 79 39.2
FAN18G1224 Fragaria x ananassa HOM05D003981 ORTHO05D003666 4.3e-08 63.2 97 42.3
CSS0034833 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D003666 5.6e-08 62.8 159 27.0
FAN08G0796 Fragaria x ananassa HOM05D003981 ORTHO05D003666 9.5e-08 62.0 221 27.1
MD11G1005600 Malus domestica HOM05D003981 ORTHO05D003666 9.5e-08 62.0 126 40.5
TWI59G0188 Tripterygium wilfordii HOM05D003981 ORTHO05D003666 9.5e-08 62.0 88 38.6
Actinidia06940 Actinidia chinensis HOM05D003981 ORTHO05D003666 1.2e-07 61.6 105 38.1
FAN09G0012 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.2e-07 61.6 130 32.3
Prupe.7G182200 Prunus persica HOM05D003981 ORTHO05D003666 1.6e-07 61.2 92 38.0
TWI59G1434 Tripterygium wilfordii HOM05D003981 ORTHO05D003666 1.6e-07 61.2 125 33.6
Ciclev10006577m.g Citrus clementina HOM05D003981 ORTHO05D003666 2.1e-07 60.8 125 32.8
PSO717G0120 Papaver somniferum HOM05D000007 ORTHO05D000676 2.8e-07 60.5 126 30.2
FvH4_1g20161 Fragaria vesca HOM05D003981 ORTHO05D003666 6.2e-07 59.3 227 27.3
FAN11G0099 Fragaria x ananassa HOM05D003981 ORTHO05D003666 6.2e-07 59.3 180 31.7
Aqoxy3G01326 Aquilegia oxysepala HOM05D000007 ORTHO05D000017 1.1e-06 58.5 123 33.3
CSS0040592 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D003666 1.8e-06 57.8 134 29.9
FAN18G3444 Fragaria x ananassa HOM05D003981 ORTHO05D003666 3.1e-06 57.0 127 35.4
Haze_23197 Corylus avellana HOM05D000007 ORTHO05D003666 4.0e-06 56.6 194 28.9
PSO675G3899 Papaver somniferum HOM05D000007 ORTHO05D000676 5.2e-06 56.2 145 27.6
Prupe.3G112000 Prunus persica HOM05D000007 ORTHO05D000521 5.2e-06 56.2 129 29.5


User provided reference genes

Program Settings