Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN23G0158 Fragaria x ananassa HOM05D029661 ORTHO05D029371 6.0e-197 690.6 347 100.0
FvH4_1g16490 Fragaria vesca HOM05D029661 ORTHO05D029371 3.4e-59 233.0 222 61.7
FAN19G1003 Fragaria x ananassa HOM05D029661 ORTHO05D029371 4.3e-54 216.1 221 58.8
RcHm_v2.0_Chr2g0106371 Rosa chinensis HOM05D029661 ORTHO05D029371 7.6e-35 152.1 157 54.8
TPR.G7001 Trifolium pratense HOM05D009500 ORTHO05D000368 3.6e-16 90.1 286 29.7
CSS0031751 Camellia sinensis var. sinensis HOM05D000576 ORTHO05D000368 1.8e-15 87.8 286 29.0
TPR.G4800 Trifolium pratense HOM05D009500 ORTHO05D000368 1.8e-15 87.8 292 30.5
TPR.G9274 Trifolium pratense HOM05D009500 ORTHO05D000368 2.3e-15 87.4 286 30.1
RcHm_v2.0_Chr3g0476161 Rosa chinensis HOM05D000576 ORTHO05D000368 2.6e-14 84.0 287 27.5
Sabra17G0081300 Salix brachista HOM05D000576 ORTHO05D000368 2.6e-14 84.0 278 29.5
TPR.G6942 Trifolium pratense HOM05D009500 ORTHO05D000368 1.3e-13 81.6 287 28.9
TPR.G4702 Trifolium pratense HOM05D009500 ORTHO05D000368 2.2e-13 80.9 294 29.3
RcHm_v2.0_Chr2g0167551 Rosa chinensis HOM05D000576 ORTHO05D000368 5.3e-12 76.3 259 27.0
TAR365G0708 Trochodendron aralioides HOM05D000576 ORTHO05D000368 5.3e-12 76.3 263 29.3
TPR.G6938 Trifolium pratense HOM05D009500 ORTHO05D000368 9.1e-12 75.5 297 25.6
FvH4_6g47821 Fragaria vesca HOM05D000576 ORTHO05D000368 1.2e-11 75.1 295 26.8
Medtr1g111630 Medicago truncatula HOM05D009500 ORTHO05D000368 1.2e-11 75.1 331 24.8
Medtr7g114090 Medicago truncatula HOM05D009500 ORTHO05D000368 2.0e-11 74.3 293 28.7
TPR.G4783 Trifolium pratense HOM05D009500 ORTHO05D000368 2.0e-11 74.3 310 27.4
FAN05G2407 Fragaria x ananassa HOM05D000576 ORTHO05D000368 3.5e-11 73.6 284 25.7
Potri.017G092301 Populus trichocarpa HOM05D008175 ORTHO05D000368 3.5e-11 73.6 226 30.5
FvH4_7g25361 Fragaria vesca HOM05D008847 ORTHO05D000368 5.9e-11 72.8 273 26.4
Psat3g004120 Pisum sativum HOM05D009500 ORTHO05D000368 5.9e-11 72.8 313 27.2
TPR.G4714 Trifolium pratense HOM05D009500 ORTHO05D000368 7.7e-11 72.4 127 36.2
TPR.G4771 Trifolium pratense HOM05D009500 ORTHO05D000368 7.7e-11 72.4 247 29.6
FAN14G0812 Fragaria x ananassa HOM05D000576 ORTHO05D000368 1.0e-10 72.0 299 27.4
FAN06G2118 Fragaria x ananassa HOM05D008847 ORTHO05D016304 1.3e-10 71.6 273 26.7
Ca_09502_v3 Cicer arietinum L. HOM05D009500 ORTHO05D000368 1.7e-10 71.2 283 26.9
Medtr2g064400 Medicago truncatula HOM05D008175 ORTHO05D010403 2.9e-10 70.5 226 29.2
RcHm_v2.0_Chr2g0167601 Rosa chinensis HOM05D000576 ORTHO05D000368 3.8e-10 70.1 259 25.5
Medtr7g116580 Medicago truncatula HOM05D009500 ORTHO05D000368 6.5e-10 69.3 148 33.8
TPR.G11377 Trifolium pratense HOM05D009500 ORTHO05D000368 8.5e-10 68.9 168 31.5
FvH4_1g04270 Fragaria vesca HOM05D000576 ORTHO05D000368 1.1e-09 68.6 266 26.3
FAN09G3608 Fragaria x ananassa HOM05D000576 ORTHO05D000368 1.1e-09 68.6 245 25.3
Prupe.3G259300 Prunus persica HOM05D008847 ORTHO05D000368 1.1e-09 68.6 241 25.7
CSS0035647 Camellia sinensis var. sinensis HOM05D000576 ORTHO05D000368 1.9e-09 67.8 244 29.9
Migut.C01162 Erythranthe guttata HOM05D000576 ORTHO05D000368 2.5e-09 67.4 299 24.4
FAN09G4808 Fragaria x ananassa HOM05D008847 ORTHO05D000368 2.5e-09 67.4 241 28.2
FAN05G3417 Fragaria x ananassa HOM05D008847 ORTHO05D000368 3.2e-09 67.0 288 25.7
FAN06G2289 Fragaria x ananassa HOM05D000576 ORTHO05D000368 4.2e-09 66.6 289 28.7
Phvul.003G068100 Phaseolus vulgaris HOM05D000576 ORTHO05D000368 5.5e-09 66.2 299 25.8
TAR633G2603 Trochodendron aralioides HOM05D000576 ORTHO05D000368 5.5e-09 66.2 254 29.1
FAN06G0982 Fragaria x ananassa HOM05D000576 ORTHO05D000368 9.4e-09 65.5 289 28.4
FAN03G0578 Fragaria x ananassa HOM05D008847 ORTHO05D000368 1.6e-08 64.7 228 30.7
RcHm_v2.0_Chr2g0168251 Rosa chinensis HOM05D000576 ORTHO05D000368 2.1e-08 64.3 223 28.3
FAN02G1311 Fragaria x ananassa HOM05D008847 ORTHO05D000368 2.7e-08 63.9 127 32.3
FAN06G5009 Fragaria x ananassa HOM05D000576 ORTHO05D000368 2.7e-08 63.9 233 28.8
TAR629G2683 Trochodendron aralioides HOM05D000576 ORTHO05D000368 2.7e-08 63.9 258 26.7
Dinv11451 Davidia involucrata HOM05D000576 ORTHO05D000368 1.0e-07 62.0 289 28.4
COL.COLO4_13493 Corchorus olitorius HOM05D000576 ORTHO05D000368 1.4e-07 61.6 236 31.4
Medtr7g095560 Medicago truncatula HOM05D008175 ORTHO05D010403 1.4e-07 61.6 258 23.3
Medtr7g087040 Medicago truncatula HOM05D008175 ORTHO05D010403 1.8e-07 61.2 261 24.5
Actinidia07081 Actinidia chinensis HOM05D000576 ORTHO05D000368 2.3e-07 60.8 275 25.1
TAR633G1895 Trochodendron aralioides HOM05D000576 ORTHO05D000368 2.3e-07 60.8 282 26.6
TAR633G2125 Trochodendron aralioides HOM05D000576 ORTHO05D000368 3.0e-07 60.5 282 26.6
FAN19G2457 Fragaria x ananassa HOM05D000576 ORTHO05D000368 4.0e-07 60.1 236 23.7
Ciclev10008324m.g Citrus clementina HOM05D000576 ORTHO05D000368 5.2e-07 59.7 199 26.6
Medtr7g116260 Medicago truncatula HOM05D009500 ORTHO05D000368 6.7e-07 59.3 103 33.0
FAN28G2519 Fragaria x ananassa HOM05D000576 ORTHO05D000368 8.8e-07 58.9 243 22.2
Medtr6g471290 Medicago truncatula HOM05D008175 ORTHO05D010403 8.8e-07 58.9 352 23.0
Migut.C01273 Erythranthe guttata HOM05D000576 ORTHO05D000368 1.1e-06 58.5 275 25.8
Gorai.007G299300 Gossypium raimondii HOM05D000576 ORTHO05D000368 1.5e-06 58.2 241 28.6
Ciclev10008358m.g Citrus clementina HOM05D000576 ORTHO05D000368 2.0e-06 57.8 205 28.3
Dinv22828 Davidia involucrata HOM05D000576 ORTHO05D000368 2.0e-06 57.8 242 24.0
TPR.G36952 Trifolium pratense HOM05D009500 ORTHO05D000368 2.0e-06 57.8 83 36.1
COL.COLO4_02841 Corchorus olitorius HOM05D000576 ORTHO05D000368 2.6e-06 57.4 267 25.1
Prupe.7G069200 Prunus persica HOM05D000576 ORTHO05D000368 2.6e-06 57.4 150 30.7
RcHm_v2.0_Chr5g0047501 Rosa chinensis HOM05D008847 ORTHO05D000368 2.6e-06 57.4 251 25.5
DCAR_023416 Daucus carota HOM05D000576 ORTHO05D000368 3.3e-06 57.0 243 25.1
Dinv22832 Davidia involucrata HOM05D000576 ORTHO05D000368 3.3e-06 57.0 235 23.0
FAN01G2751 Fragaria x ananassa HOM05D008847 ORTHO05D000368 3.3e-06 57.0 228 28.5
FAN10G0882 Fragaria x ananassa HOM05D000576 ORTHO05D000368 3.3e-06 57.0 283 27.2
Gohir.A11G267101 Gossypium hirsutum HOM05D000576 ORTHO05D000368 3.3e-06 57.0 241 27.8
QL10p004689 Quercus lobata HOM05D000576 ORTHO05D000368 5.7e-06 56.2 227 24.2
Ciclev10008427m.g Citrus clementina HOM05D000576 ORTHO05D000368 7.5e-06 55.8 236 25.4
Ciclev10011606m.g Citrus clementina HOM05D000576 ORTHO05D000368 7.5e-06 55.8 205 27.3
Ciclev10011607m.g Citrus clementina HOM05D000576 ORTHO05D000368 7.5e-06 55.8 205 27.3
MD14G1064800 Malus domestica HOM05D000576 ORTHO05D000368 7.5e-06 55.8 150 30.7
COL.COLO4_23656 Corchorus olitorius HOM05D010825 ORTHO05D012667 9.7e-06 55.5 214 27.1
Medtr7g117735 Medicago truncatula HOM05D009500 ORTHO05D000368 9.7e-06 55.5 93 32.3


User provided reference genes

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