Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN23G0143 Fragaria x ananassa HOM05D005423 ORTHO05D006223 1.8e-79 299.7 205 100.0
FAN16G1003 Fragaria x ananassa HOM05D005423 ORTHO05D006223 2.1e-48 196.4 178 79.8
FvH4_3g11440 Fragaria vesca HOM05D005423 ORTHO05D006223 3.3e-46 189.1 176 78.4
FvH4_5g18240 Fragaria vesca HOM05D005423 ORTHO05D006223 5.3e-36 155.2 92 85.9
FAN18G3875 Fragaria x ananassa HOM05D005423 ORTHO05D006223 5.3e-36 155.2 93 84.9
FvH4_1g24910 Fragaria vesca HOM05D005423 ORTHO05D006223 3.1e-28 129.4 90 72.2
MD00G1097400 Malus domestica HOM05D005423 ORTHO05D006223 3.1e-28 129.4 91 64.8
FvH4_5g21920 Fragaria vesca HOM05D005423 ORTHO05D006223 5.3e-28 128.6 84 76.2
Prupe.4G102300 Prunus persica HOM05D005423 ORTHO05D006223 2.7e-27 126.3 92 62.0
Cfa000754 Carpinus fangiana HOM05D005423 ORTHO05D006223 3.2e-25 119.4 89 57.3
CANSAT35G1706 Cannabis sativa HOM05D005423 ORTHO05D006223 3.4e-22 109.4 101 54.5
FAN03G0475 Fragaria x ananassa HOM05D005423 ORTHO05D006223 2.2e-21 106.7 84 70.2
CiPaw.09G149100 Carya illinoinensis HOM05D005423 ORTHO05D006223 4.8e-21 105.5 90 55.6
FAN14G5542 Fragaria x ananassa HOM05D005423 ORTHO05D006223 8.3e-21 104.8 60 86.7
FAN11G1050 Fragaria x ananassa HOM05D005423 ORTHO05D006223 1.4e-20 104.0 63 81.0
QL05p063092 Quercus lobata HOM05D005423 ORTHO05D006223 3.1e-20 102.8 93 51.6
Lj1P1155T48 Lonicera japonica HOM05D005423 ORTHO05D006223 1.2e-19 100.9 92 51.1
Glyma.15G191500 Glycine max HOM05D005423 ORTHO05D006223 1.6e-19 100.5 87 55.2
FAN11G2744 Fragaria x ananassa HOM05D005423 ORTHO05D046010 2.7e-19 99.8 54 92.6
Nitab4.5_0004015g0040 Nicotiana tabacum HOM05D005423 ORTHO05D006223 2.7e-19 99.8 93 51.6
Nitab4.5_0006659g0010 Nicotiana tabacum HOM05D005423 ORTHO05D006223 3.5e-19 99.4 93 52.7
Phvul.009G218400 Phaseolus vulgaris HOM05D005423 ORTHO05D006223 3.5e-19 99.4 83 57.8
TAR636G0950 Trochodendron aralioides HOM05D005423 ORTHO05D006223 3.5e-19 99.4 89 48.3
FAN18G0575 Fragaria x ananassa HOM05D005423 ORTHO05D006223 7.7e-19 98.2 81 65.4
FvH4_6g29350 Fragaria vesca HOM05D005423 ORTHO05D006223 1.3e-18 97.4 58 81.0
Manes.03G066900 Manihot esculenta HOM05D005423 ORTHO05D006223 2.3e-18 96.7 92 52.2
Duzib160G0446 Durio zibethinus HOM05D005423 ORTHO05D006223 3.8e-18 95.9 97 49.5
FvH4_3g19970 Fragaria vesca HOM05D005423 ORTHO05D046010 3.8e-18 95.9 54 90.7
Thecc.06G005400 Theobroma cacao HOM05D005423 ORTHO05D006223 1.9e-17 93.6 97 49.5
TWI38G0231 Tripterygium wilfordii HOM05D005423 ORTHO05D006223 1.9e-17 93.6 97 45.4
SGA_v2.0_scaffold1G00298 Striga asiatica HOM05D005423 ORTHO05D006223 2.5e-17 93.2 87 52.9
HanXRQChr01g0020631 Helianthus annuus HOM05D005423 ORTHO05D006223 4.2e-17 92.4 100 49.0
AUR62028667 Chenopodium quinoa HOM05D005423 ORTHO05D006223 7.2e-17 91.7 94 44.7
Lsat_1_v5_gn_1_91741 Lactuca sativa HOM05D005423 ORTHO05D006223 1.2e-16 90.9 103 43.7
PGSC0003DMG400025363 Solanum tuberosum HOM05D005423 ORTHO05D006223 1.6e-16 90.5 91 46.2
Sopen11g030350 Solanum pennellii HOM05D005423 ORTHO05D006223 2.1e-16 90.1 91 46.2
FAN25G0767 Fragaria x ananassa HOM05D005423 ORTHO05D006223 2.8e-16 89.7 48 89.6
AUR62028668 Chenopodium quinoa HOM05D005423 ORTHO05D006223 3.6e-16 89.4 94 43.6
Hma1.2p1_0410F.1_g147050 Hydrangea macrophylla HOM05D005423 ORTHO05D006223 3.6e-16 89.4 84 47.6
Psat1g018720 Pisum sativum HOM05D005423 ORTHO05D006223 3.6e-16 89.4 95 48.4
Potri.011G155150 Populus trichocarpa HOM05D005423 ORTHO05D006223 4.7e-16 89.0 86 44.2
Solyc11g072680.1 Solanum lycopersicum HOM05D005423 ORTHO05D006223 4.7e-16 89.0 91 46.2
Sc04g0008360 Simmondsia chinensis HOM05D005423 ORTHO05D006223 6.1e-16 88.6 84 52.4
Migut.M01932 Erythranthe guttata HOM05D005423 ORTHO05D006223 8.0e-16 88.2 104 43.3
Ciclev10017493m.g Citrus clementina HOM05D005423 ORTHO05D006223 1.0e-15 87.8 94 50.0
FAN21G0600 Fragaria x ananassa HOM05D005423 ORTHO05D006223 1.4e-15 87.4 48 87.5
Potri.001G440800 Populus trichocarpa HOM05D005423 ORTHO05D006223 1.4e-15 87.4 84 48.8
CAN.G84.20 Capsicum annuum HOM05D005423 ORTHO05D006223 1.8e-15 87.0 89 46.1
Gohir.D02G104700 Gossypium hirsutum HOM05D005423 ORTHO05D006223 1.8e-15 87.0 104 43.3
Gorai.005G118900 Gossypium raimondii HOM05D005423 ORTHO05D006223 1.8e-15 87.0 104 43.3
Sc21g0002200 Simmondsia chinensis HOM05D005423 ORTHO05D006223 1.8e-15 87.0 91 47.3
Atru.chr10.659 Acer truncatum HOM05D005423 ORTHO05D006223 3.0e-15 86.3 91 44.0
Gohir.A02G088801 Gossypium hirsutum HOM05D005423 ORTHO05D006223 4.0e-15 85.9 104 42.3
Aqoxy2G01436 Aquilegia oxysepala HOM05D005423 ORTHO05D006223 5.2e-15 85.5 91 40.7
EL10Ac5g10610 Beta vulgaris HOM05D005423 ORTHO05D006223 5.2e-15 85.5 98 37.8
AUR62007135 Chenopodium quinoa HOM05D005423 ORTHO05D006223 6.8e-15 85.1 89 44.9
Ca_02385_v3 Cicer arietinum L. HOM05D005423 ORTHO05D006223 8.8e-15 84.7 91 48.4
Lj6g0018842 Lotus japonicus HOM05D005423 ORTHO05D006223 8.8e-15 84.7 90 51.1
AUR62008092 Chenopodium quinoa HOM05D005423 ORTHO05D006223 1.2e-14 84.3 94 42.6
Rhsim13G0126500 Rhododendron simsii HOM05D005423 ORTHO05D006223 1.2e-14 84.3 100 45.0
AUR62008091 Chenopodium quinoa HOM05D005423 ORTHO05D006223 2.0e-14 83.6 94 41.5
Sc21g0002210 Simmondsia chinensis HOM05D005423 ORTHO05D006223 4.4e-14 82.4 94 43.6
Haze_05969 Corylus avellana HOM05D005423 ORTHO05D006223 5.7e-14 82.0 64 53.1
Lalb_Chr11g0073251 Lupinus albus HOM05D005423 ORTHO05D006223 5.7e-14 82.0 95 46.3
FAN25G3864 Fragaria x ananassa HOM05D046692 ORTHO05D006223 7.5e-14 81.6 48 83.3
FAN28G2925 Fragaria x ananassa HOM05D005784 ORTHO05D007803 2.2e-13 80.1 44 86.4
FAN26G0124 Fragaria x ananassa HOM05D005784 ORTHO05D007803 2.8e-13 79.7 45 86.7
TPR.G22906 Trifolium pratense HOM05D005423 ORTHO05D006223 2.8e-13 79.7 86 51.2
MBI19_g30013_MAGBIO Magnolia biondii HOM05D005423 ORTHO05D006223 4.9e-13 79.0 88 43.2
EL10Ac5g10640 Beta vulgaris HOM05D005423 ORTHO05D006223 1.1e-12 77.8 102 37.3
FAN09G3285 Fragaria x ananassa HOM05D046692 ORTHO05D006223 1.1e-12 77.8 48 81.2
Medtr2g047120 Medicago truncatula HOM05D005423 ORTHO05D006223 2.4e-12 76.6 88 45.5
EL10Ac5g10674 Beta vulgaris HOM05D005423 ORTHO05D006223 4.1e-12 75.9 101 36.6
Ah.02g124440 Amaranthus hybridus HOM05D005423 ORTHO05D006223 9.2e-12 74.7 100 37.0
AUR62008089 Chenopodium quinoa HOM05D005423 ORTHO05D006223 9.2e-12 74.7 94 38.3
MBI19_g33491_MAGBIO Magnolia biondii HOM05D005423 ORTHO05D006223 1.2e-11 74.3 88 40.9
Carub.0001s2910 Capsella rubella HOM05D005423 ORTHO05D006223 7.8e-11 71.6 96 42.7
THA.LOC104814335 Tarenaya hassleriana HOM05D005423 ORTHO05D006223 7.8e-11 71.6 91 44.0
BcaB04g18206 Brassica carinata HOM05D005423 ORTHO05D006223 2.3e-10 70.1 95 42.1
AT1G30800 Arabidopsis thaliana HOM05D005423 ORTHO05D006223 3.8e-10 69.3 99 42.4
Aqoxy7G03258 Aquilegia oxysepala HOM05D005423 ORTHO05D006223 5.0e-10 68.9 70 40.0
BraA08t33095Z Brassica rapa HOM05D005423 ORTHO05D006223 5.0e-10 68.9 95 42.1
AL1G44970 Arabidopsis lyrata HOM05D005423 ORTHO05D006223 6.6e-10 68.6 103 41.7
Carub.0006s3088 Capsella rubella HOM05D005423 ORTHO05D006223 6.6e-10 68.6 104 38.5
BcaC07g37806 Brassica carinata HOM05D005423 ORTHO05D006223 8.6e-10 68.2 95 41.1
A08p11040 Brassica napus HOM05D005423 ORTHO05D006223 8.6e-10 68.2 95 41.1
BolC8t48195H Brassica oleracea HOM05D005423 ORTHO05D006223 8.6e-10 68.2 95 41.1
COL.COLO4_26869 Corchorus olitorius HOM05D005423 ORTHO05D006223 8.6e-10 68.2 89 44.9
Thhalv10009325m.g Eutrema salsugineum HOM05D005423 ORTHO05D006223 1.1e-09 67.8 105 41.0
CARHR030270 Cardamine hirsuta HOM05D005423 ORTHO05D006223 1.9e-09 67.0 92 42.4
A06p18470 Brassica napus HOM05D005423 ORTHO05D006223 3.3e-09 66.2 94 41.5
CDE04G0856 Ceratophyllum demersum HOM05D005423 ORTHO05D006223 9.5e-09 64.7 94 40.4
Sp1g26680 Schrenkiella parvula HOM05D005423 ORTHO05D006223 9.5e-09 64.7 103 39.8
Aa31LG6G12020 Aethionema arabicum HOM05D005423 ORTHO05D006223 2.1e-08 63.5 100 40.0
C08p24310 Brassica napus HOM05D005423 ORTHO05D006223 2.1e-08 63.5 88 38.6
BolC8t50049H Brassica oleracea HOM05D005423 ORTHO05D006223 2.1e-08 63.5 88 38.6
BcaC07g39399 Brassica carinata HOM05D005423 ORTHO05D006223 3.6e-08 62.8 88 38.6
BcaB01g00727 Brassica carinata HOM05D005423 ORTHO05D006223 1.0e-07 61.2 86 39.5
PSO782G2497 Papaver somniferum HOM05D005423 ORTHO05D006223 1.5e-06 57.4 99 31.3
Sabra16G0298100 Salix brachista HOM05D005423 ORTHO05D006223 2.0e-06 57.0 55 50.9
Sabra16G0300100 Salix brachista HOM05D005423 ORTHO05D006223 2.0e-06 57.0 55 50.9


User provided reference genes

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