Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN23G0113 Fragaria x ananassa HOM05D006393 ORTHO05D008088 9.3e-145 516.9 273 100.0
FvH4_1g04221 Fragaria vesca HOM05D006393 ORTHO05D008088 2.1e-141 505.8 288 94.4
RcHm_v2.0_Chr2g0089771 Rosa chinensis HOM05D006393 ORTHO05D008088 1.3e-135 486.5 288 90.3
Prupe.7G235100 Prunus persica HOM05D006393 ORTHO05D008088 1.2e-123 446.8 288 79.9
MD02G1061500 Malus domestica HOM05D006393 ORTHO05D008088 1.8e-119 433.0 288 78.1
Atru.chr7.1280 Acer truncatum HOM05D006393 ORTHO05D008088 1.5e-118 429.9 288 76.7
Cfa003299 Carpinus fangiana HOM05D006393 ORTHO05D008088 2.4e-116 422.5 288 76.0
Haze_25669 Corylus avellana HOM05D006393 ORTHO05D008088 3.1e-116 422.2 288 75.7
CiPaw.03G236400 Carya illinoinensis HOM05D006393 ORTHO05D008088 1.2e-115 420.2 288 74.3
Manes.16G064200 Manihot esculenta HOM05D006393 ORTHO05D008088 2.0e-115 419.5 288 73.6
Sabra18G0063700 Salix brachista HOM05D006393 ORTHO05D008088 2.2e-114 416.0 279 75.3
QL02p086364 Quercus lobata HOM05D006393 ORTHO05D008088 5.0e-114 414.8 287 73.5
Sed0023374 Sechium edule HOM05D006393 ORTHO05D008088 6.1e-112 407.9 288 70.5
Ciclev10008889m.g Citrus clementina HOM05D006393 ORTHO05D008088 7.9e-112 407.5 288 72.9
GSVIVG01015453001 Vitis vinifera HOM05D006393 ORTHO05D008088 2.3e-111 406.0 288 71.5
COL.COLO4_34948 Corchorus olitorius HOM05D006393 ORTHO05D008088 3.9e-111 405.2 288 71.2
Cpa.g.sc23.161 Carica papaya HOM05D006393 ORTHO05D008088 5.1e-111 404.8 288 71.9
Rhsim01G0090600 Rhododendron simsii HOM05D006393 ORTHO05D008088 1.1e-110 403.7 288 71.5
ClCG06G010490 Citrullus lanatus HOM05D006393 ORTHO05D008088 1.5e-110 403.3 289 71.3
Thecc.09G116800 Theobroma cacao HOM05D006393 ORTHO05D008088 1.5e-110 403.3 288 71.5
Potri.018G073000 Populus trichocarpa HOM05D006393 ORTHO05D008088 2.6e-110 402.5 288 71.2
MELO3C025307.2 Cucumis melo HOM05D006393 ORTHO05D008088 3.3e-110 402.1 288 70.5
PGR102G0276 Punica granatum HOM05D006393 ORTHO05D008088 4.4e-110 401.7 288 71.9
Actinidia09396 Actinidia chinensis HOM05D006393 ORTHO05D008088 5.7e-110 401.4 288 70.8
CsaV3_1G030940 Cucumis sativus L. HOM05D006393 ORTHO05D008088 5.7e-110 401.4 288 70.8
TWI34G1546 Tripterygium wilfordii HOM05D006393 ORTHO05D008088 5.7e-110 401.4 288 70.1
vmacro20677 Vaccinium macrocarpon HOM05D006393 ORTHO05D008088 9.7e-110 400.6 288 71.2
Hma1.2p1_0018F.1_g013070 Hydrangea macrophylla HOM05D006393 ORTHO05D008088 1.3e-109 400.2 288 71.9
Duzib168G1441 Durio zibethinus HOM05D006393 ORTHO05D008088 3.7e-109 398.7 288 69.8
CSS0031330 Camellia sinensis var. sinensis HOM05D006393 ORTHO05D008088 1.1e-108 397.1 288 70.5
Gohir.D06G058100 Gossypium hirsutum HOM05D006393 ORTHO05D008088 1.4e-108 396.7 288 70.5
Gorai.010G068300 Gossypium raimondii HOM05D006393 ORTHO05D008088 1.8e-108 396.4 288 70.5
Lj7A639G46 Lonicera japonica HOM05D006393 ORTHO05D008088 3.1e-108 395.6 322 63.7
Migut.C00826 Erythranthe guttata HOM05D006393 ORTHO05D008088 1.2e-107 393.7 288 68.4
CAN.G1665.6 Capsicum annuum HOM05D006393 ORTHO05D008088 2.0e-107 392.9 288 70.1
Lalb_Chr13g0302251 Lupinus albus HOM05D006393 ORTHO05D008088 3.5e-107 392.1 283 71.4
Aqoxy7G01879 Aquilegia oxysepala HOM05D006393 ORTHO05D008088 5.9e-107 391.3 287 70.0
Gohir.A06G059900 Gossypium hirsutum HOM05D006393 ORTHO05D008088 5.9e-107 391.3 288 69.4
arahy.Tifrunner.gnm1.ann1.RZM4QH Arachis hypogaea HOM05D006393 ORTHO05D008088 1.9e-105 386.3 282 70.6
Solyc10g079970.2 Solanum lycopersicum HOM05D006393 ORTHO05D008088 5.5e-105 384.8 288 67.0
arahy.Tifrunner.gnm1.ann1.3AE437 Arachis hypogaea HOM05D006393 ORTHO05D008088 7.2e-105 384.4 280 70.7
Sopen10g030590 Solanum pennellii HOM05D006393 ORTHO05D008088 9.4e-105 384.0 288 67.0
PGSC0003DMG401029823 Solanum tuberosum HOM05D006393 ORTHO05D008088 1.6e-104 383.3 288 67.4
MSTRG.1197 Avicennia marina HOM05D006393 ORTHO05D008088 2.1e-104 382.9 288 66.7
DCAR_010438 Daucus carota HOM05D006393 ORTHO05D008088 2.7e-104 382.5 288 68.4
Hund09172 Selenicereus undatus HOM05D006393 ORTHO05D008088 2.7e-104 382.5 288 66.7
Nitab4.5_0002551g0020 Nicotiana tabacum HOM05D006393 ORTHO05D008088 1.0e-103 380.6 288 66.3
SGA_v2.0_scaffold92G28235 Striga asiatica HOM05D006393 ORTHO05D008088 8.8e-103 377.5 288 67.0
AUR62033415 Chenopodium quinoa HOM05D006393 ORTHO05D008088 2.6e-102 375.9 288 65.3
Eucgr.C04142 Eucalyptus grandis HOM05D006393 ORTHO05D008088 2.6e-102 375.9 259 73.7
Nn8g39292 Nelumbo nucifera HOM05D006393 ORTHO05D008088 3.3e-102 375.6 288 67.4
Psat4g042480 Pisum sativum HOM05D006393 ORTHO05D008088 5.7e-102 374.8 286 68.2
PSO782G0281 Papaver somniferum HOM05D006393 ORTHO05D008088 7.4e-102 374.4 282 66.7
AT5G19930 Arabidopsis thaliana HOM05D006393 ORTHO05D008088 2.8e-101 372.5 280 67.5
Aa31LG9G6050 Aethionema arabicum HOM05D006393 ORTHO05D008088 3.7e-101 372.1 280 67.5
unitig_37.g13035 Utricularia gibba HOM05D006393 ORTHO05D008088 6.3e-101 371.3 288 64.9
Sp6g24450 Schrenkiella parvula HOM05D006393 ORTHO05D008088 1.4e-100 370.2 280 67.1
Lsat_1_v5_gn_7_42880 Lactuca sativa HOM05D006393 ORTHO05D008088 1.8e-100 369.8 273 67.4
A10p19800 Brassica napus HOM05D006393 ORTHO05D008088 3.1e-100 369.0 280 67.1
BraA10t44056Z Brassica rapa HOM05D006393 ORTHO05D008088 4.1e-100 368.6 280 66.4
BcaC04g19399 Brassica carinata HOM05D006393 ORTHO05D008088 7.0e-100 367.9 280 66.8
C09p56120 Brassica napus HOM05D006393 ORTHO05D008088 7.0e-100 367.9 280 66.8
BolC9t58479H Brassica oleracea HOM05D006393 ORTHO05D008088 7.0e-100 367.9 280 66.8
AL6G31460 Arabidopsis lyrata HOM05D006393 ORTHO05D008088 1.2e-99 367.1 280 66.4
HanXRQChr03g0062141 Helianthus annuus HOM05D006393 ORTHO05D008088 1.2e-99 367.1 288 64.6
Thhalv10014278m.g Eutrema salsugineum HOM05D006393 ORTHO05D008088 2.0e-99 366.3 280 66.8
BcaB08g36553 Brassica carinata HOM05D006393 ORTHO05D008088 5.9e-99 364.8 280 66.1
Carub.0006s1830 Capsella rubella HOM05D006393 ORTHO05D008088 1.0e-98 364.0 280 65.0
TPR.G26762 Trifolium pratense HOM05D006393 ORTHO05D008088 8.5e-98 360.9 291 65.6
Ca_21724_v3 Cicer arietinum L. HOM05D006393 ORTHO05D008088 1.5e-97 360.1 282 65.6
Medtr4g112990 Medicago truncatula HOM05D006393 ORTHO05D008088 3.2e-97 359.0 286 64.0
Peaxi162Scf00223g01425 Petunia axillaris HOM05D006393 ORTHO05D008088 4.2e-97 358.6 286 64.7
EL10Ac8g18557 Beta vulgaris HOM05D006393 ORTHO05D008088 5.5e-97 358.2 288 63.9
VMungo1215G0586 Vigna mungo HOM05D006393 ORTHO05D008088 5.5e-97 358.2 282 66.3
CDE06G0973 Ceratophyllum demersum HOM05D006393 ORTHO05D008088 2.1e-96 356.3 288 63.2
Phvul.003G159300 Phaseolus vulgaris HOM05D006393 ORTHO05D008088 4.7e-96 355.1 282 65.2
MBI04_g35350_MAGBIO Magnolia biondii HOM05D006393 ORTHO05D008088 6.1e-96 354.8 249 71.5
THA.LOC104815111 Tarenaya hassleriana HOM05D006393 ORTHO05D008088 1.4e-95 353.6 284 65.1
Lj4g0026371 Lotus japonicus HOM05D006393 ORTHO05D008088 2.3e-95 352.8 282 66.0
Glyma.17G120200 Glycine max HOM05D006393 ORTHO05D008088 1.5e-94 350.1 285 65.3
Oeu046267.2 Olea europaea HOM05D006393 ORTHO05D008088 1.7e-93 346.7 426 47.7
MBI01_g13571_MAGBIO Magnolia biondii HOM05D006393 ORTHO05D008088 3.1e-92 342.4 285 63.5
AUR62011040 Chenopodium quinoa HOM05D006393 ORTHO05D008088 5.3e-92 341.7 264 65.2
Os01g0507300 Oryza sativa ssp. japonica HOM05D006393 ORTHO05D008088 1.5e-89 333.6 275 61.1
HPP92_008697 Vanilla planifolia HOM05D006393 ORTHO05D008088 5.5e-89 331.6 288 59.0
SalBow7G4467 Salvia bowleyana HOM05D006393 ORTHO05D008088 9.4e-89 330.9 273 60.8
Zm00001eb122440 Zea mays HOM05D006393 ORTHO05D008088 9.4e-89 330.9 273 63.4
Nitab4.5_0010615g0010 Nicotiana tabacum HOM05D006393 ORTHO05D008088 1.2e-88 330.5 249 66.7
Ah.14g081310 Amaranthus hybridus HOM05D006393 ORTHO05D008088 2.1e-88 329.7 348 53.4
Cc06_g09230 Coffea canephora HOM05D006393 ORTHO05D008088 1.5e-86 323.6 236 72.0
Zm00001eb106640 Zea mays HOM05D006393 ORTHO05D008088 5.7e-86 321.6 275 58.9
HPP92_009792 Vanilla planifolia HOM05D006393 ORTHO05D008088 4.8e-85 318.5 288 57.3
Os01g0178200 Oryza sativa ssp. japonica HOM05D006393 ORTHO05D008088 5.4e-84 315.1 322 53.1
Sc07g0007380 Simmondsia chinensis HOM05D006393 ORTHO05D008088 1.0e-82 310.8 236 66.9
SEGI_37175 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 5.0e-82 308.5 288 55.9
ATR0083G026 Amborella trichopoda HOM05D006393 ORTHO05D008088 3.6e-80 302.4 283 58.7
CARHR192920 Cardamine hirsuta HOM05D006393 ORTHO05D008088 2.3e-79 299.7 199 72.9
Dinv41564 Davidia involucrata HOM05D006752 ORTHO05D008088 1.5e-78 297.0 196 76.0
ECA240G0151 Erigeron canadensis HOM05D006393 ORTHO05D008088 2.8e-77 292.7 206 70.4
Mapoly0052s0018 Marchantia polymorpha HOM05D006393 ORTHO05D008088 6.6e-74 281.6 284 50.0
Peaxi162Scf00223g01424 Petunia axillaris HOM05D006393 ORTHO05D008088 8.0e-72 274.6 234 60.7
Pp3c12_24880 Physcomitrium patens HOM05D006393 ORTHO05D008088 2.6e-70 269.6 282 51.1
SMO340G0297 Selaginella moellendorffii HOM05D006393 ORTHO05D008088 7.0e-68 261.5 284 49.6
Oeu027539.2 Olea europaea HOM05D006393 ORTHO05D008088 5.2e-63 245.4 296 48.6
TAR636G2166 Trochodendron aralioides HOM05D006393 ORTHO05D008088 1.3e-58 230.7 143 79.7
PRCOL_00002470 Prasinoderma coloniale HOM05D006393 ORTHO05D008088 4.9e-45 185.7 271 43.5
CDE07G1479 Ceratophyllum demersum HOM05D006393 ORTHO05D008088 1.0e-42 177.9 165 52.7
Cre17.g726350 Chlamydomonas reinhardtii HOM05D006393 ORTHO05D008088 1.9e-41 173.7 319 37.3
Psat6g218400 Pisum sativum HOM05D006393 ORTHO05D008088 1.4e-39 167.5 116 75.9
Glyma.05G012000 Glycine max HOM05D006393 ORTHO05D008088 8.4e-37 158.3 117 72.6
MCO12G460 Micromonas commoda HOM05D006393 ORTHO05D008088 6.0e-35 152.1 167 50.3
SEGI_23420 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 7.8e-35 151.8 181 45.9
Psat5g214680 Pisum sativum HOM05D006393 ORTHO05D008088 5.8e-30 135.6 95 72.6
SEGI_36873 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 7.1e-28 128.6 181 45.3
Eucgr.L03082 Eucalyptus grandis HOM05D006393 ORTHO05D008088 2.1e-27 127.1 132 53.0
Cre02.g118200 Chlamydomonas reinhardtii HOM05D006393 ORTHO05D008088 4.6e-27 125.9 329 32.2
Zm00001eb342450 Zea mays HOM05D006393 ORTHO05D008088 9.6e-25 118.2 163 43.6
Eucgr.E03680 Eucalyptus grandis HOM05D006393 ORTHO05D008088 1.0e-21 108.2 73 74.0
SEGI_10855 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 1.3e-18 97.8 173 35.8
vmacro16552 Vaccinium macrocarpon HOM05D006393 ORTHO05D008088 3.0e-10 70.1 142 38.0
TAR636G3545 Trochodendron aralioides HOM05D006393 ORTHO05D008088 1.2e-06 58.2 50 54.0


User provided reference genes

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