Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN23G0105 Fragaria x ananassa HOM05D005812 ORTHO05D007232 3.0e-119 431.8 205 100.0
FvH4_1g20820 Fragaria vesca HOM05D005812 ORTHO05D007232 3.4e-91 338.6 169 95.3
FAN19G2427 Fragaria x ananassa HOM05D005812 ORTHO05D007232 3.4e-91 338.6 169 95.3
RcHm_v2.0_Chr2g0113441 Rosa chinensis HOM05D005812 ORTHO05D007232 3.4e-75 285.4 169 83.4
MD15G1323600 Malus domestica HOM05D005812 ORTHO05D007232 4.8e-45 185.3 164 56.7
Prupe.6G187400 Prunus persica HOM05D005812 ORTHO05D007232 3.1e-44 182.6 162 56.8
Cfa002656 Carpinus fangiana HOM05D005812 ORTHO05D007232 4.5e-43 178.7 158 55.7
CiPaw.03G142200 Carya illinoinensis HOM05D005812 ORTHO05D007232 1.8e-39 166.8 163 50.3
CiPaw.04G099800 Carya illinoinensis HOM05D005812 ORTHO05D007232 1.5e-38 163.7 158 53.2
QL06p049491 Quercus lobata HOM05D005812 ORTHO05D007232 3.3e-38 162.5 184 47.3
Atru.chr4.60 Acer truncatum HOM05D005812 ORTHO05D007232 8.5e-34 147.9 154 46.1
GSVIVG01002272001 Vitis vinifera HOM05D005812 ORTHO05D007232 1.9e-33 146.7 159 47.2
Cpa.g.sc230.1 Carica papaya HOM05D005812 ORTHO05D007232 4.0e-31 139.0 172 42.4
Ciclev10026269m.g Citrus clementina HOM05D005812 ORTHO05D007232 8.8e-31 137.9 205 40.5
Gohir.A10G085300 Gossypium hirsutum HOM05D005812 ORTHO05D007232 7.5e-30 134.8 164 42.1
Gorai.011G113200 Gossypium raimondii HOM05D005812 ORTHO05D007232 2.2e-29 133.3 164 42.1
TAR628G0897 Trochodendron aralioides HOM05D005812 ORTHO05D007232 1.1e-28 131.0 166 39.8
Gorai.008G090000 Gossypium raimondii HOM05D005812 ORTHO05D007232 1.4e-28 130.6 158 43.7
Gohir.D12G083200 Gossypium hirsutum HOM05D005812 ORTHO05D007232 7.0e-28 128.3 158 43.7
Gohir.D10G103600 Gossypium hirsutum HOM05D005812 ORTHO05D007232 2.0e-27 126.7 164 41.5
Gohir.D11G221400 Gossypium hirsutum HOM05D005812 ORTHO05D007232 7.7e-27 124.8 161 41.6
Gorai.007G238400 Gossypium raimondii HOM05D005812 ORTHO05D007232 7.7e-27 124.8 161 41.6
TWI74G1407 Tripterygium wilfordii HOM05D005812 ORTHO05D007232 3.8e-26 122.5 137 45.3
Thecc.01G101100 Theobroma cacao HOM05D005812 ORTHO05D007232 6.5e-26 121.7 146 43.2
Haze_24926 Corylus avellana HOM05D005812 ORTHO05D007232 1.9e-25 120.2 158 43.7
Gohir.A11G201100 Gossypium hirsutum HOM05D005812 ORTHO05D007232 3.2e-25 119.4 161 40.4
Manes.12G134500 Manihot esculenta HOM05D005812 ORTHO05D007232 9.4e-25 117.9 164 39.6
Duzib147G1550 Durio zibethinus HOM05D005812 ORTHO05D007232 2.7e-24 116.3 164 38.4
PGR102G1433 Punica granatum HOM05D005812 ORTHO05D007232 8.0e-24 114.8 166 36.1
Sabra07G0077200 Salix brachista HOM05D005812 ORTHO05D007232 8.0e-24 114.8 184 37.5
Gohir.A12G083366 Gossypium hirsutum HOM05D005812 ORTHO05D007232 1.0e-23 114.4 155 39.4
Potri.007G093200 Populus trichocarpa HOM05D005812 ORTHO05D007232 4.0e-23 112.5 153 42.5
Duzib264G1072 Durio zibethinus HOM05D005812 ORTHO05D007232 5.2e-23 112.1 146 40.4
Duzib187G0152 Durio zibethinus HOM05D005812 ORTHO05D007232 8.8e-23 111.3 148 38.5
Eucgr.H04782 Eucalyptus grandis HOM05D005812 ORTHO05D007232 2.2e-21 106.7 152 36.2
Manes.13G075600 Manihot esculenta HOM05D005812 ORTHO05D007232 8.3e-21 104.8 154 35.1
CANSAT01G0800 Cannabis sativa HOM05D005812 ORTHO05D007232 9.1e-20 101.3 167 36.5
Glyma.11G240400 Glycine max HOM05D005812 ORTHO05D007232 1.7e-18 97.1 128 39.8
Dinv13192 Davidia involucrata HOM05D005812 ORTHO05D007232 4.2e-17 92.4 97 46.4
Lj6g0021205 Lotus japonicus HOM05D005812 ORTHO05D007232 1.2e-16 90.9 132 37.9
TPR.G17850 Trifolium pratense HOM05D005812 ORTHO05D007232 3.6e-16 89.4 148 34.5
Glyma.18G016900 Glycine max HOM05D005812 ORTHO05D007232 6.1e-16 88.6 128 39.1
BcaC01g00328 Brassica carinata HOM05D005812 ORTHO05D007232 8.0e-16 88.2 178 37.1
ClCG10G008980 Citrullus lanatus HOM05D005812 ORTHO05D007232 8.0e-16 88.2 132 40.2
arahy.Tifrunner.gnm1.ann1.I4SKYX Arachis hypogaea HOM05D005812 ORTHO05D007232 1.0e-15 87.8 143 34.3
BolC3t20101H Brassica oleracea HOM05D005812 ORTHO05D007232 1.0e-15 87.8 178 37.1
Phvul.001G252300 Phaseolus vulgaris HOM05D005812 ORTHO05D007232 1.4e-15 87.4 128 34.4
A08p23250 Brassica napus HOM05D005812 ORTHO05D007232 2.3e-15 86.7 178 36.5
arahy.Tifrunner.gnm1.ann1.LSP3Z9 Arachis hypogaea HOM05D005812 ORTHO05D007232 3.0e-15 86.3 143 33.6
BraA08t34281Z Brassica rapa HOM05D005812 ORTHO05D007232 6.8e-15 85.1 178 36.0
VMungo1383G2465 Vigna mungo HOM05D005812 ORTHO05D007232 1.5e-14 84.0 119 38.7
C03p78490 Brassica napus HOM05D005812 ORTHO05D007232 2.6e-14 83.2 178 34.8
Medtr3g087150 Medicago truncatula HOM05D005812 ORTHO05D007232 1.3e-13 80.9 124 36.3
Psat5g090240 Pisum sativum HOM05D005812 ORTHO05D007232 1.7e-13 80.5 139 32.4
Ca_16522_v3 Cicer arietinum L. HOM05D005812 ORTHO05D007232 2.7e-11 73.2 124 33.9
Dinv21904 Davidia involucrata HOM05D005812 ORTHO05D007232 2.7e-11 73.2 71 52.1
Lalb_Chr23g0277481 Lupinus albus HOM05D005812 ORTHO05D007232 6.6e-10 68.6 130 34.6
MBI02_g31269_MAGBIO Magnolia biondii HOM05D005812 ORTHO05D007232 1.1e-09 67.8 105 37.1
MBI09_g06374_MAGBIO Magnolia biondii HOM05D005812 ORTHO05D007232 1.9e-09 67.0 95 40.0
Actinidia20016 Actinidia chinensis HOM05D005812 ORTHO05D007232 2.8e-08 63.2 97 36.1
MBI19_g36862_MAGBIO Magnolia biondii HOM05D005241 ORTHO05D005862 1.4e-07 60.8 88 40.9
Rhsim10G0163100 Rhododendron simsii HOM05D001481 ORTHO05D001865 6.8e-07 58.5 94 31.9
Actinidia06567 Actinidia chinensis HOM05D005812 ORTHO05D007232 2.6e-06 56.6 97 34.0


User provided reference genes

Program Settings